Copying experiment: Imetelstat Is a Potent Inducer of Ferroptosis That Effectively Diminishes Acute Myeloid Leukemia Burden and Delays Relapse Following Pro-Oxidant Therapy: /Panorama Public/2022/QIMRBerghofer - Targeted Lipidomics - Imetelstat Is a Potent Inducer of Ferroptosis

Copying experiment: Imetelstat Is a Potent Inducer of Ferroptosis That Effectively Diminishes Acute Myeloid Leukemia Burden and Delays Relapse Following Pro-Oxidant Therapy

QIMRBerghofer - Targeted Lipidomics - Imetelstat Is a Potent Inducer of Ferroptosis

Job Status

Created:

2022-01-31 09:04:45

Modified:

2022-01-31 09:17:09

Email:

vsharma@uw.edu

Status:

COMPLETE

Info:

Description:

Copying experiment: Imetelstat Is a Potent Inducer of Ferroptosis That Effectively Diminishes Acute Myeloid Leukemia Burden and Delays Relapse Following Pro-Oxidant Therapy

File Path:

/data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/QIMRBerghofer - Targeted Lipidomics - Imetelstat Is a Potent Inducer of Ferroptosis_05649c78-64e4-103a-93e1-fea6ddf5fdda/_temp__2022-01-31_09-04-45/Experiment_1275.log

Files:

Experiment_1275.log

Join job:

Status	Description

Split jobs:

Status	Description

Completed Runs:

200916_NB4Lipids_dMRM_2021-06-08_13-47-21.sky.zip
220111_PDX-Lipids_dMRM_2022-01-31_13-25-00.sky.zip

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Log File

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31 Jan 2022 09:04:45,717 INFO : Copying experiment "Imetelstat Is a Potent Inducer of Ferroptosis That Effectively Diminishes Acute Myeloid Leukemia Burden and Delays Relapse Following Pro-Oxidant Therapy" from folder /QIMRBerghofer Medical Research Institute/Precision & Systems Biomedicine (Hill Group)/Targeted Lipidomics - Imetelstat Is a Potent Inducer of Ferroptosis to /Panorama Public/2022/QIMRBerghofer - Targeted Lipidomics - Imetelstat Is a Potent Inducer of Ferroptosis

31 Jan 2022 09:04:45,717 INFO : =======================================

31 Jan 2022 09:10:00,063 INFO : Starting to run task 'org.labkey.panoramapublic.pipeline.ExperimentExportTask' at location 'webserver-high-priority'

31 Jan 2022 09:10:00,063 INFO :

31 Jan 2022 09:10:00,064 INFO : Exporting experiment.

31 Jan 2022 09:10:07,677 INFO : Exporting files metadata.

31 Jan 2022 09:10:07,677 DEBUG: [/QIMRBerghofer Medical Research Institute/Precision & Systems Biomedicine (Hill Group)/Targeted Lipidomics - Imetelstat Is a Potent Inducer of Ferroptosis]  Writing files metadata to /data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/QIMRBerghofer - Targeted Lipidomics - Imetelstat Is a Potent Inducer of Ferroptosis_05649c78-64e4-103a-93e1-fea6ddf5fdda/_temp__2022-01-31_09-04-45/export

31 Jan 2022 09:10:07,729 INFO :

31 Jan 2022 09:10:07,730 INFO : Experiment export completed successfully.

31 Jan 2022 09:10:07,730 INFO : Successfully completed task 'org.labkey.panoramapublic.pipeline.ExperimentExportTask'

31 Jan 2022 09:10:58,496 INFO : Starting to run task 'org.labkey.panoramapublic.pipeline.ExperimentImportTask' at location 'webserver-high-priority'

31 Jan 2022 09:10:58,497 INFO :

31 Jan 2022 09:10:58,497 INFO : Importing experiment.

31 Jan 2022 09:10:58,499 DEBUG: [/Panorama Public/2022/QIMRBerghofer - Targeted Lipidomics - Imetelstat Is a Potent Inducer of Ferroptosis] Importing folder properties from: /data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/QIMRBerghofer - Targeted Lipidomics - Imetelstat Is a Potent Inducer of Ferroptosis_05649c78-64e4-103a-93e1-fea6ddf5fdda/_temp__2022-01-31_09-04-45/export

31 Jan 2022 09:10:58,501 INFO : Loading folder properties (folder type, settings and active modules)

31 Jan 2022 09:10:58,501 DEBUG: [/Panorama Public/2022/QIMRBerghofer - Targeted Lipidomics - Imetelstat Is a Potent Inducer of Ferroptosis] Folder type: Targeted MS

31 Jan 2022 09:10:58,501 DEBUG: [/Panorama Public/2022/QIMRBerghofer - Targeted Lipidomics - Imetelstat Is a Potent Inducer of Ferroptosis] Active modules: Pipeline, Internal, TargetedMS, Experiment, Issues, Query, Search, PanoramaPublic, Announcements, Core, FileContent, Wiki, Assay, API, MS2

31 Jan 2022 09:10:58,579 INFO : Done importing folder properties (folder type, settings and active modules)

31 Jan 2022 09:10:58,582 INFO : Loading grid views

31 Jan 2022 09:10:58,586 INFO : 1 custom view imported

31 Jan 2022 09:10:58,587 INFO : Done importing grid views

31 Jan 2022 09:10:58,588 INFO : Loading etl definitions

31 Jan 2022 09:10:58,591 INFO : Loading wikis

31 Jan 2022 09:10:58,592 INFO : 0 wikis imported

31 Jan 2022 09:10:58,592 INFO : Done importing wikis

31 Jan 2022 09:10:58,593 INFO : Starting to copy files

31 Jan 2022 09:11:00,598 INFO : Copied 74 files

31 Jan 2022 09:11:00,599 INFO : Ensuring exp.data rows exist for imported files

31 Jan 2022 09:11:00,977 INFO : Starting Sample Type and Data Class import

31 Jan 2022 09:11:00,977 INFO : No types XAR file to process.

31 Jan 2022 09:11:00,977 INFO : Finished importing Sample Types and Data Classes

31 Jan 2022 09:11:00,979 INFO : Loading xar

31 Jan 2022 09:11:01,427 DEBUG: Finished loading Protocol with LSID 'urn:lsid:uw.edu:Protocol.Folder-9799:TargetedMS.ImportSkyZip.Core'

31 Jan 2022 09:11:01,430 DEBUG: Finished loading Protocol with LSID 'urn:lsid:uw.edu:Protocol.Folder-9799:TargetedMS.ImportSkyZip.Output'

31 Jan 2022 09:11:01,432 DEBUG: Finished loading Protocol with LSID 'urn:lsid:uw.edu:Protocol.Folder-9799:TargetedMS.ImportSkyZip'

31 Jan 2022 09:11:01,432 DEBUG: Protocol import complete

31 Jan 2022 09:11:01,434 DEBUG: Finished loading Experiment with LSID 'urn:lsid:uw.edu:Experiment.Folder-9799:Imetelstat+Is+a+Potent+Inducer+of+Ferroptosis+That+Effectively+Diminishes+Acute+Myeloid+Leukemia+Burden+and+Delays+Relapse+Following+Pro-Oxidant+Therapy'

31 Jan 2022 09:11:01,434 DEBUG: Experiment/Run group import complete

31 Jan 2022 09:11:01,442 DEBUG: Protocol action set import complete

31 Jan 2022 09:11:01,454 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-9799:TargetedMS.ImportSkyZip'

31 Jan 2022 09:11:01,465 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:skyd.Folder-9799:06af50d9-aa3a-1039-be5b-fea6ddf5138a'

31 Jan 2022 09:11:01,469 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:UploadedFile.Folder-9799:06af5099-aa3a-1039-be5b-fea6ddf5138a'

31 Jan 2022 09:11:01,469 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-9799:TargetedMS.ImportSkyZip.Core'

31 Jan 2022 09:11:01,472 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-9799:TargetedMS.ImportSkyZip.Output'

31 Jan 2022 09:11:01,472 DEBUG: Finished loading ExperimentRun with LSID 'urn:lsid:uw.edu:Run.Folder-9799:06af5452-aa3a-1039-be5b-fea6ddf5138a'

31 Jan 2022 09:11:01,482 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-9799:TargetedMS.ImportSkyZip'

31 Jan 2022 09:11:01,487 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:skyd.Folder-9799:b665ae3f-6471-103a-93e1-fea6ddf5fdda'

31 Jan 2022 09:11:01,490 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:UploadedFile.Folder-9799:b665ae30-6471-103a-93e1-fea6ddf5fdda'

31 Jan 2022 09:11:01,490 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-9799:TargetedMS.ImportSkyZip.Core'

31 Jan 2022 09:11:01,492 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-9799:TargetedMS.ImportSkyZip.Output'

31 Jan 2022 09:11:01,493 DEBUG: Finished loading ExperimentRun with LSID 'urn:lsid:uw.edu:Run.Folder-9799:b665afc7-6471-103a-93e1-fea6ddf5fdda'

31 Jan 2022 09:11:01,494 DEBUG: Trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/QIMRBerghofer%20-%20Targeted%20Lipidomics%20-%20Imetelstat%20Is%20a%20Potent%20Inducer%20of%20Ferroptosis_05649c78-64e4-103a-93e1-fea6ddf5fdda/_temp__2022-01-31_09-04-45/export/xar/experiments_and_runs.xar.exploded/Run111109/200916_NB4Lipids_dMRM_2021-06-08_13-47-21/200916_NB4Lipids_dMRM.skyd into the system

31 Jan 2022 09:11:01,494 DEBUG: Finished trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/QIMRBerghofer%20-%20Targeted%20Lipidomics%20-%20Imetelstat%20Is%20a%20Potent%20Inducer%20of%20Ferroptosis_05649c78-64e4-103a-93e1-fea6ddf5fdda/_temp__2022-01-31_09-04-45/export/xar/experiments_and_runs.xar.exploded/Run111109/200916_NB4Lipids_dMRM_2021-06-08_13-47-21/200916_NB4Lipids_dMRM.skyd into the system

31 Jan 2022 09:11:01,494 DEBUG: Trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/QIMRBerghofer%20-%20Targeted%20Lipidomics%20-%20Imetelstat%20Is%20a%20Potent%20Inducer%20of%20Ferroptosis_05649c78-64e4-103a-93e1-fea6ddf5fdda/_temp__2022-01-31_09-04-45/export/xar/experiments_and_runs.xar.exploded/Run111109/200916_NB4Lipids_dMRM_2021-06-08_13-47-21.sky.zip into the system

31 Jan 2022 09:11:01,496 INFO : Starting import from 200916_NB4Lipids_dMRM_2021-06-08_13-47-21.sky.zip

31 Jan 2022 09:11:01,499 INFO : Starting to import Skyline document from 200916_NB4Lipids_dMRM_2021-06-08_13-47-21.sky.zip

31 Jan 2022 09:11:01,502 INFO : Expanding 200910_CP_AML_NB4_TS.irtdb

31 Jan 2022 09:11:01,502 INFO : Expanding 200916_NB4Lipids_dMRM.skyd

31 Jan 2022 09:11:01,574 INFO : Expanding 200916_NB4Lipids_dMRM.sky.view

31 Jan 2022 09:11:01,574 INFO : Expanding 200916_NB4Lipids_dMRM.sky

31 Jan 2022 09:11:01,596 INFO : Expanding 200916_NB4Lipids_dMRM.skyl

31 Jan 2022 09:11:01,653 DEBUG: Starting to load chromatogram headers

31 Jan 2022 09:11:01,670 DEBUG: Done loading chromatogram headers

31 Jan 2022 09:11:01,932 INFO : Inserting ISTD

31 Jan 2022 09:11:01,951 INFO : 1% Done

31 Jan 2022 09:11:02,021 INFO : 2% Done

31 Jan 2022 09:11:02,078 INFO : 3% Done

31 Jan 2022 09:11:02,087 DEBUG: Total molecules inserted: 13

31 Jan 2022 09:11:02,087 INFO : Inserting SPH

31 Jan 2022 09:11:02,117 DEBUG: Total molecules inserted: 3

31 Jan 2022 09:11:02,117 INFO : Inserting Cer

31 Jan 2022 09:11:02,143 INFO : 4% Done

31 Jan 2022 09:11:02,212 INFO : 5% Done

31 Jan 2022 09:11:02,287 INFO : 6% Done

31 Jan 2022 09:11:02,359 INFO : 7% Done

31 Jan 2022 09:11:02,429 INFO : 8% Done

31 Jan 2022 09:11:02,505 INFO : 9% Done

31 Jan 2022 09:11:02,563 INFO : 10% Done

31 Jan 2022 09:11:02,625 INFO : 11% Done

31 Jan 2022 09:11:02,701 INFO : 12% Done

31 Jan 2022 09:11:02,701 DEBUG: Inserted 50 molecules

31 Jan 2022 09:11:02,763 INFO : 13% Done

31 Jan 2022 09:11:02,799 DEBUG: Total molecules inserted: 59

31 Jan 2022 09:11:02,800 INFO : Inserting Glycosphingolipid

31 Jan 2022 09:11:02,821 INFO : 14% Done

31 Jan 2022 09:11:02,879 INFO : 15% Done

31 Jan 2022 09:11:02,942 INFO : 16% Done

31 Jan 2022 09:11:02,997 INFO : 17% Done

31 Jan 2022 09:11:03,066 INFO : 18% Done

31 Jan 2022 09:11:03,148 INFO : 19% Done

31 Jan 2022 09:11:03,205 DEBUG: Total molecules inserted: 38

31 Jan 2022 09:11:03,205 INFO : Inserting Sulfatide

31 Jan 2022 09:11:03,208 INFO : 20% Done

31 Jan 2022 09:11:03,237 DEBUG: Total molecules inserted: 3

31 Jan 2022 09:11:03,237 INFO : Inserting SM

31 Jan 2022 09:11:03,269 INFO : 21% Done

31 Jan 2022 09:11:03,345 INFO : 22% Done

31 Jan 2022 09:11:03,411 INFO : 23% Done

31 Jan 2022 09:11:03,472 INFO : 24% Done

31 Jan 2022 09:11:03,520 INFO : 25% Done

31 Jan 2022 09:11:03,647 INFO : 26% Done

31 Jan 2022 09:11:03,665 DEBUG: Total molecules inserted: 40

31 Jan 2022 09:11:03,665 INFO : Inserting PC

31 Jan 2022 09:11:03,715 INFO : 27% Done

31 Jan 2022 09:11:03,766 INFO : 28% Done

31 Jan 2022 09:11:03,825 INFO : 29% Done

31 Jan 2022 09:11:03,884 INFO : 30% Done

31 Jan 2022 09:11:03,946 INFO : 31% Done

31 Jan 2022 09:11:04,016 INFO : 32% Done

31 Jan 2022 09:11:04,100 INFO : 33% Done

31 Jan 2022 09:11:04,162 INFO : 34% Done

31 Jan 2022 09:11:04,192 DEBUG: Inserted 50 molecules

31 Jan 2022 09:11:04,222 INFO : 35% Done

31 Jan 2022 09:11:04,294 INFO : 36% Done

31 Jan 2022 09:11:04,355 INFO : 37% Done

31 Jan 2022 09:11:04,420 INFO : 38% Done

31 Jan 2022 09:11:04,481 INFO : 39% Done

31 Jan 2022 09:11:04,540 INFO : 40% Done

31 Jan 2022 09:11:04,612 INFO : 41% Done

31 Jan 2022 09:11:04,675 INFO : 42% Done

31 Jan 2022 09:11:04,736 DEBUG: Inserted 100 molecules

31 Jan 2022 09:11:04,748 INFO : 43% Done

31 Jan 2022 09:11:04,804 DEBUG: Total molecules inserted: 106

31 Jan 2022 09:11:04,804 INFO : Inserting LPC

31 Jan 2022 09:11:04,808 INFO : 44% Done

31 Jan 2022 09:11:04,869 INFO : 45% Done

31 Jan 2022 09:11:04,932 INFO : 46% Done

31 Jan 2022 09:11:04,996 INFO : 47% Done

31 Jan 2022 09:11:05,069 INFO : 48% Done

31 Jan 2022 09:11:05,133 INFO : 49% Done

31 Jan 2022 09:11:05,195 INFO : 50% Done

31 Jan 2022 09:11:05,261 INFO : 51% Done

31 Jan 2022 09:11:05,314 INFO : 52% Done

31 Jan 2022 09:11:05,333 DEBUG: Inserted 50 molecules

31 Jan 2022 09:11:05,380 INFO : 53% Done

31 Jan 2022 09:11:05,433 INFO : 54% Done

31 Jan 2022 09:11:05,465 DEBUG: Total molecules inserted: 62

31 Jan 2022 09:11:05,465 INFO : Inserting PE

31 Jan 2022 09:11:05,496 INFO : 55% Done

31 Jan 2022 09:11:05,565 INFO : 56% Done

31 Jan 2022 09:11:05,628 INFO : 57% Done

31 Jan 2022 09:11:05,692 INFO : 58% Done

31 Jan 2022 09:11:05,776 INFO : 59% Done

31 Jan 2022 09:11:05,831 INFO : 60% Done

31 Jan 2022 09:11:05,896 INFO : 61% Done

31 Jan 2022 09:11:05,959 INFO : 62% Done

31 Jan 2022 09:11:06,003 DEBUG: Inserted 50 molecules

31 Jan 2022 09:11:06,031 INFO : 63% Done

31 Jan 2022 09:11:06,098 INFO : 64% Done

31 Jan 2022 09:11:06,164 INFO : 65% Done

31 Jan 2022 09:11:06,227 INFO : 66% Done

31 Jan 2022 09:11:06,295 INFO : 67% Done

31 Jan 2022 09:11:06,361 INFO : 68% Done

31 Jan 2022 09:11:06,430 INFO : 69% Done

31 Jan 2022 09:11:06,493 INFO : 70% Done

31 Jan 2022 09:11:06,531 DEBUG: Total molecules inserted: 97

31 Jan 2022 09:11:06,532 INFO : Inserting LPE

31 Jan 2022 09:11:06,557 INFO : 71% Done

31 Jan 2022 09:11:06,622 INFO : 72% Done

31 Jan 2022 09:11:06,684 INFO : 73% Done

31 Jan 2022 09:11:06,693 DEBUG: Total molecules inserted: 15

31 Jan 2022 09:11:06,693 INFO : Inserting PI

31 Jan 2022 09:11:06,743 INFO : 74% Done

31 Jan 2022 09:11:06,863 INFO : 75% Done

31 Jan 2022 09:11:06,929 INFO : 76% Done

31 Jan 2022 09:11:06,965 DEBUG: Total molecules inserted: 26

31 Jan 2022 09:11:06,965 INFO : Inserting LPI

31 Jan 2022 09:11:06,999 INFO : 77% Done

31 Jan 2022 09:11:07,030 DEBUG: Total molecules inserted: 6

31 Jan 2022 09:11:07,030 INFO : Inserting PS

31 Jan 2022 09:11:07,061 INFO : 78% Done

31 Jan 2022 09:11:07,099 DEBUG: Total molecules inserted: 7

31 Jan 2022 09:11:07,099 INFO : Inserting PG

31 Jan 2022 09:11:07,123 INFO : 79% Done

31 Jan 2022 09:11:07,141 DEBUG: Total molecules inserted: 4

31 Jan 2022 09:11:07,141 INFO : Inserting CE

31 Jan 2022 09:11:07,181 INFO : 80% Done

31 Jan 2022 09:11:07,237 INFO : 81% Done

31 Jan 2022 09:11:07,294 INFO : 82% Done

31 Jan 2022 09:11:07,353 INFO : 83% Done

31 Jan 2022 09:11:07,400 DEBUG: Total molecules inserted: 27

31 Jan 2022 09:11:07,400 INFO : Inserting COH

31 Jan 2022 09:11:07,410 DEBUG: Total molecules inserted: 1

31 Jan 2022 09:11:07,410 INFO : Inserting DE

31 Jan 2022 09:11:07,414 INFO : 84% Done

31 Jan 2022 09:11:07,461 DEBUG: Total molecules inserted: 5

31 Jan 2022 09:11:07,461 INFO : Inserting AcylCarnitine

31 Jan 2022 09:11:07,465 INFO : 85% Done

31 Jan 2022 09:11:07,522 INFO : 86% Done

31 Jan 2022 09:11:07,580 INFO : 87% Done

31 Jan 2022 09:11:07,589 DEBUG: Total molecules inserted: 13

31 Jan 2022 09:11:07,589 INFO : Inserting DG

31 Jan 2022 09:11:07,639 INFO : 88% Done

31 Jan 2022 09:11:07,711 INFO : 89% Done

31 Jan 2022 09:11:07,770 INFO : 90% Done

31 Jan 2022 09:11:07,797 DEBUG: Total molecules inserted: 20

31 Jan 2022 09:11:07,797 INFO : Inserting TG

31 Jan 2022 09:11:07,830 INFO : 91% Done

31 Jan 2022 09:11:07,889 INFO : 92% Done

31 Jan 2022 09:11:07,949 INFO : 93% Done

31 Jan 2022 09:11:08,022 INFO : 94% Done

31 Jan 2022 09:11:08,097 INFO : 95% Done

31 Jan 2022 09:11:08,160 INFO : 96% Done

31 Jan 2022 09:11:08,220 INFO : 97% Done

31 Jan 2022 09:11:08,269 INFO : 98% Done

31 Jan 2022 09:11:08,298 DEBUG: Total molecules inserted: 47

31 Jan 2022 09:11:08,298 INFO : Inserting Ubiquinone

31 Jan 2022 09:11:08,308 DEBUG: Total molecules inserted: 1

31 Jan 2022 09:11:08,309 INFO : Done parsing Skyline document.

31 Jan 2022 09:11:08,309 INFO : Calculating iRT correlations for 20 sample(s)

31 Jan 2022 09:11:08,398 INFO : Calculated iRT regression line from full standard list.

31 Jan 2022 09:11:08,483 INFO : Calculated iRT regression line from full standard list.

31 Jan 2022 09:11:08,578 INFO : Calculated iRT regression line from full standard list.

31 Jan 2022 09:11:08,682 INFO : Calculated iRT regression line from full standard list.

31 Jan 2022 09:11:08,770 INFO : Calculated iRT regression line from full standard list.

31 Jan 2022 09:11:08,853 INFO : Calculated iRT regression line from full standard list.

31 Jan 2022 09:11:08,932 INFO : Calculated iRT regression line from full standard list.

31 Jan 2022 09:11:09,022 INFO : Calculated iRT regression line from full standard list.

31 Jan 2022 09:11:09,115 INFO : Calculated iRT regression line from full standard list.

31 Jan 2022 09:11:09,192 INFO : Calculated iRT regression line from full standard list.

31 Jan 2022 09:11:09,266 INFO : Calculated iRT regression line from full standard list.

31 Jan 2022 09:11:09,340 INFO : Calculated iRT regression line from full standard list.

31 Jan 2022 09:11:09,419 INFO : Calculated iRT regression line from full standard list.

31 Jan 2022 09:11:09,495 INFO : Calculated iRT regression line from full standard list.

31 Jan 2022 09:11:09,566 INFO : Calculated iRT regression line from full standard list.

31 Jan 2022 09:11:09,636 INFO : Calculated iRT regression line from full standard list.

31 Jan 2022 09:11:09,708 INFO : Calculated iRT regression line from full standard list.

31 Jan 2022 09:11:09,778 INFO : Calculated iRT regression line from full standard list.

31 Jan 2022 09:11:09,850 INFO : Calculated iRT regression line from full standard list.

31 Jan 2022 09:11:09,924 INFO : Calculated iRT regression line from full standard list.

31 Jan 2022 09:11:09,925 INFO : Finished calculating iRT correlations for all samples

31 Jan 2022 09:11:16,355 INFO : Creating and populating temp tables for Proportion values

31 Jan 2022 09:11:16,456 INFO : Setting PrecursorModifiedAreaProportion values on precursorchrominfo

31 Jan 2022 09:11:16,893 INFO : Setting ModifiedAreaProportion values on generalmoleculechrominfo

31 Jan 2022 09:11:17,210 INFO : Cleaning up temp tables

31 Jan 2022 09:11:17,497 INFO : Completed import of Skyline document from 200916_NB4Lipids_dMRM_2021-06-08_13-47-21.sky.zip

31 Jan 2022 09:11:17,500 INFO : 100% Done

31 Jan 2022 09:11:17,504 DEBUG: Finished trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/QIMRBerghofer%20-%20Targeted%20Lipidomics%20-%20Imetelstat%20Is%20a%20Potent%20Inducer%20of%20Ferroptosis_05649c78-64e4-103a-93e1-fea6ddf5fdda/_temp__2022-01-31_09-04-45/export/xar/experiments_and_runs.xar.exploded/Run111109/200916_NB4Lipids_dMRM_2021-06-08_13-47-21.sky.zip into the system

31 Jan 2022 09:11:17,505 DEBUG: Trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/QIMRBerghofer%20-%20Targeted%20Lipidomics%20-%20Imetelstat%20Is%20a%20Potent%20Inducer%20of%20Ferroptosis_05649c78-64e4-103a-93e1-fea6ddf5fdda/_temp__2022-01-31_09-04-45/export/xar/experiments_and_runs.xar.exploded/Run126858/220111_PDX-Lipids_dMRM_2022-01-31_13-25-00/220111_PDX-Lipids_dMRM.skyd into the system

31 Jan 2022 09:11:17,505 DEBUG: Finished trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/QIMRBerghofer%20-%20Targeted%20Lipidomics%20-%20Imetelstat%20Is%20a%20Potent%20Inducer%20of%20Ferroptosis_05649c78-64e4-103a-93e1-fea6ddf5fdda/_temp__2022-01-31_09-04-45/export/xar/experiments_and_runs.xar.exploded/Run126858/220111_PDX-Lipids_dMRM_2022-01-31_13-25-00/220111_PDX-Lipids_dMRM.skyd into the system

31 Jan 2022 09:11:17,505 DEBUG: Trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/QIMRBerghofer%20-%20Targeted%20Lipidomics%20-%20Imetelstat%20Is%20a%20Potent%20Inducer%20of%20Ferroptosis_05649c78-64e4-103a-93e1-fea6ddf5fdda/_temp__2022-01-31_09-04-45/export/xar/experiments_and_runs.xar.exploded/Run126858/220111_PDX-Lipids_dMRM_2022-01-31_13-25-00.sky.zip into the system

31 Jan 2022 09:11:17,507 INFO : Starting import from 220111_PDX-Lipids_dMRM_2022-01-31_13-25-00.sky.zip

31 Jan 2022 09:11:17,509 INFO : Starting to import Skyline document from 220111_PDX-Lipids_dMRM_2022-01-31_13-25-00.sky.zip

31 Jan 2022 09:11:17,515 INFO : Expanding 220107_PDX_TS.irtdb

31 Jan 2022 09:11:17,516 INFO : Expanding 220111_PDX-Lipids_dMRM.skyd

31 Jan 2022 09:11:17,722 INFO : Expanding 220111_PDX-Lipids_dMRM.sky.view

31 Jan 2022 09:11:17,723 INFO : Expanding 220111_PDX-Lipids_dMRM.sky

31 Jan 2022 09:11:17,764 INFO : Expanding 220111_PDX-Lipids_dMRM.skyl

31 Jan 2022 09:11:17,771 WARN : The version of this Skyline document is 21.1. This is newer than the highest supported version 20.22

31 Jan 2022 09:11:17,859 DEBUG: Starting to load chromatogram headers

31 Jan 2022 09:11:17,890 DEBUG: Done loading chromatogram headers

31 Jan 2022 09:11:17,901 INFO : Calculated iRT regression line from full standard list.

31 Jan 2022 09:11:18,260 INFO : Inserting ISTD

31 Jan 2022 09:11:18,285 INFO : 1% Done

31 Jan 2022 09:11:18,405 INFO : 2% Done

31 Jan 2022 09:11:18,503 INFO : 3% Done

31 Jan 2022 09:11:18,518 DEBUG: Total molecules inserted: 13

31 Jan 2022 09:11:18,519 INFO : Inserting SPH

31 Jan 2022 09:11:18,570 DEBUG: Total molecules inserted: 3

31 Jan 2022 09:11:18,571 INFO : Inserting Cer

31 Jan 2022 09:11:18,609 INFO : 4% Done

31 Jan 2022 09:11:18,726 INFO : 5% Done

31 Jan 2022 09:11:18,836 INFO : 6% Done

31 Jan 2022 09:11:18,944 INFO : 7% Done

31 Jan 2022 09:11:19,053 INFO : 8% Done

31 Jan 2022 09:11:19,169 INFO : 9% Done

31 Jan 2022 09:11:19,276 INFO : 10% Done

31 Jan 2022 09:11:19,383 INFO : 11% Done

31 Jan 2022 09:11:19,469 DEBUG: Inserted 50 molecules

31 Jan 2022 09:11:19,490 INFO : 12% Done

31 Jan 2022 09:11:19,591 INFO : 13% Done

31 Jan 2022 09:11:19,655 DEBUG: Total molecules inserted: 60

31 Jan 2022 09:11:19,655 INFO : Inserting Glycosphingolipid

31 Jan 2022 09:11:19,691 INFO : 14% Done

31 Jan 2022 09:11:19,791 INFO : 15% Done

31 Jan 2022 09:11:19,892 INFO : 16% Done

31 Jan 2022 09:11:20,000 INFO : 17% Done

31 Jan 2022 09:11:20,104 INFO : 18% Done

31 Jan 2022 09:11:20,169 DEBUG: Total molecules inserted: 30

31 Jan 2022 09:11:20,169 INFO : Inserting Sulfatide

31 Jan 2022 09:11:20,189 DEBUG: Total molecules inserted: 1

31 Jan 2022 09:11:20,189 INFO : Inserting SM

31 Jan 2022 09:11:20,210 INFO : 19% Done

31 Jan 2022 09:11:20,316 INFO : 20% Done

31 Jan 2022 09:11:20,422 INFO : 21% Done

31 Jan 2022 09:11:20,528 INFO : 22% Done

31 Jan 2022 09:11:20,639 INFO : 23% Done

31 Jan 2022 09:11:20,753 INFO : 24% Done

31 Jan 2022 09:11:20,867 INFO : 25% Done

31 Jan 2022 09:11:20,971 DEBUG: Total molecules inserted: 43

31 Jan 2022 09:11:20,971 INFO : Inserting PC

31 Jan 2022 09:11:21,095 INFO : 26% Done

31 Jan 2022 09:11:21,199 INFO : 27% Done

31 Jan 2022 09:11:21,306 INFO : 28% Done

31 Jan 2022 09:11:21,418 INFO : 29% Done

31 Jan 2022 09:11:21,537 INFO : 30% Done

31 Jan 2022 09:11:21,641 INFO : 31% Done

31 Jan 2022 09:11:21,763 INFO : 32% Done

31 Jan 2022 09:11:21,876 INFO : 33% Done

31 Jan 2022 09:11:21,876 DEBUG: Inserted 50 molecules

31 Jan 2022 09:11:21,984 INFO : 34% Done

31 Jan 2022 09:11:22,090 INFO : 35% Done

31 Jan 2022 09:11:22,195 INFO : 36% Done

31 Jan 2022 09:11:22,303 INFO : 37% Done

31 Jan 2022 09:11:22,411 INFO : 38% Done

31 Jan 2022 09:11:22,524 INFO : 39% Done

31 Jan 2022 09:11:22,631 INFO : 40% Done

31 Jan 2022 09:11:22,741 INFO : 41% Done

31 Jan 2022 09:11:22,781 DEBUG: Inserted 100 molecules

31 Jan 2022 09:11:22,861 INFO : 42% Done

31 Jan 2022 09:11:22,978 INFO : 43% Done

31 Jan 2022 09:11:23,067 DEBUG: Total molecules inserted: 114

31 Jan 2022 09:11:23,067 INFO : Inserting LPC

31 Jan 2022 09:11:23,090 INFO : 44% Done

31 Jan 2022 09:11:23,199 INFO : 45% Done

31 Jan 2022 09:11:23,310 INFO : 46% Done

31 Jan 2022 09:11:23,432 INFO : 47% Done

31 Jan 2022 09:11:23,550 INFO : 48% Done

31 Jan 2022 09:11:23,681 INFO : 49% Done

31 Jan 2022 09:11:23,791 INFO : 50% Done

31 Jan 2022 09:11:23,903 INFO : 51% Done

31 Jan 2022 09:11:24,018 INFO : 52% Done

31 Jan 2022 09:11:24,018 DEBUG: Inserted 50 molecules

31 Jan 2022 09:11:24,127 INFO : 53% Done

31 Jan 2022 09:11:24,232 INFO : 54% Done

31 Jan 2022 09:11:24,320 DEBUG: Total molecules inserted: 66

31 Jan 2022 09:11:24,320 INFO : Inserting PE

31 Jan 2022 09:11:24,341 INFO : 55% Done

31 Jan 2022 09:11:24,452 INFO : 56% Done

31 Jan 2022 09:11:24,571 INFO : 57% Done

31 Jan 2022 09:11:24,687 INFO : 58% Done

31 Jan 2022 09:11:24,807 INFO : 59% Done

31 Jan 2022 09:11:24,936 INFO : 60% Done

31 Jan 2022 09:11:25,053 INFO : 61% Done

31 Jan 2022 09:11:25,210 INFO : 62% Done

31 Jan 2022 09:11:25,318 DEBUG: Inserted 50 molecules

31 Jan 2022 09:11:25,342 INFO : 63% Done

31 Jan 2022 09:11:25,460 INFO : 64% Done

31 Jan 2022 09:11:25,587 INFO : 65% Done

31 Jan 2022 09:11:25,702 INFO : 66% Done

31 Jan 2022 09:11:25,818 INFO : 67% Done

31 Jan 2022 09:11:25,930 INFO : 68% Done

31 Jan 2022 09:11:26,047 INFO : 69% Done

31 Jan 2022 09:11:26,157 INFO : 70% Done

31 Jan 2022 09:11:26,264 INFO : 71% Done

31 Jan 2022 09:11:26,281 DEBUG: Inserted 100 molecules

31 Jan 2022 09:11:26,299 DEBUG: Total molecules inserted: 100

31 Jan 2022 09:11:26,299 INFO : Inserting LPE

31 Jan 2022 09:11:26,375 INFO : 72% Done

31 Jan 2022 09:11:26,485 INFO : 73% Done

31 Jan 2022 09:11:26,586 DEBUG: Total molecules inserted: 15

31 Jan 2022 09:11:26,586 INFO : Inserting PI

31 Jan 2022 09:11:26,609 INFO : 74% Done

31 Jan 2022 09:11:26,829 INFO : 75% Done

31 Jan 2022 09:11:26,943 INFO : 76% Done

31 Jan 2022 09:11:27,071 INFO : 77% Done

31 Jan 2022 09:11:27,106 DEBUG: Total molecules inserted: 27

31 Jan 2022 09:11:27,106 INFO : Inserting LPI

31 Jan 2022 09:11:27,177 DEBUG: Total molecules inserted: 4

31 Jan 2022 09:11:27,177 INFO : Inserting PS

31 Jan 2022 09:11:27,196 INFO : 78% Done

31 Jan 2022 09:11:27,305 INFO : 79% Done

31 Jan 2022 09:11:27,324 DEBUG: Total molecules inserted: 7

31 Jan 2022 09:11:27,324 INFO : Inserting PG

31 Jan 2022 09:11:27,395 DEBUG: Total molecules inserted: 4

31 Jan 2022 09:11:27,395 INFO : Inserting CE

31 Jan 2022 09:11:27,416 INFO : 80% Done

31 Jan 2022 09:11:27,529 INFO : 81% Done

31 Jan 2022 09:11:27,633 INFO : 82% Done

31 Jan 2022 09:11:27,731 INFO : 83% Done

31 Jan 2022 09:11:27,830 INFO : 84% Done

31 Jan 2022 09:11:27,861 DEBUG: Total molecules inserted: 27

31 Jan 2022 09:11:27,861 INFO : Inserting COH

31 Jan 2022 09:11:27,877 DEBUG: Total molecules inserted: 1

31 Jan 2022 09:11:27,877 INFO : Inserting DE

31 Jan 2022 09:11:27,931 INFO : 85% Done

31 Jan 2022 09:11:27,963 DEBUG: Total molecules inserted: 5

31 Jan 2022 09:11:27,963 INFO : Inserting AcylCarnitine

31 Jan 2022 09:11:28,028 INFO : 86% Done

31 Jan 2022 09:11:28,126 INFO : 87% Done

31 Jan 2022 09:11:28,157 DEBUG: Total molecules inserted: 12

31 Jan 2022 09:11:28,157 INFO : Inserting DG

31 Jan 2022 09:11:28,229 INFO : 88% Done

31 Jan 2022 09:11:28,336 INFO : 89% Done

31 Jan 2022 09:11:28,439 INFO : 90% Done

31 Jan 2022 09:11:28,505 DEBUG: Total molecules inserted: 20

31 Jan 2022 09:11:28,505 INFO : Inserting TG

31 Jan 2022 09:11:28,543 INFO : 91% Done

31 Jan 2022 09:11:28,644 INFO : 92% Done

31 Jan 2022 09:11:28,745 INFO : 93% Done

31 Jan 2022 09:11:28,847 INFO : 94% Done

31 Jan 2022 09:11:28,942 INFO : 95% Done

31 Jan 2022 09:11:29,044 INFO : 96% Done

31 Jan 2022 09:11:29,146 INFO : 97% Done

31 Jan 2022 09:11:29,248 INFO : 98% Done

31 Jan 2022 09:11:29,301 DEBUG: Total molecules inserted: 46

31 Jan 2022 09:11:29,301 INFO : Inserting Ubiquinone

31 Jan 2022 09:11:29,317 DEBUG: Total molecules inserted: 1

31 Jan 2022 09:11:29,319 INFO : Done parsing Skyline document.

31 Jan 2022 09:11:29,319 INFO : Calculating iRT correlations for 38 sample(s)

31 Jan 2022 09:11:29,333 INFO : Attempting to calculate iRT regression line from shared peptides.

31 Jan 2022 09:11:29,335 INFO : Successfully calculated iRT regression line from 26 shared peptides.

31 Jan 2022 09:11:29,339 INFO : Attempting to calculate iRT regression line from shared peptides.

31 Jan 2022 09:11:29,341 INFO : Successfully calculated iRT regression line from 26 shared peptides.

31 Jan 2022 09:11:29,345 INFO : Attempting to calculate iRT regression line from shared peptides.

31 Jan 2022 09:11:29,346 INFO : Successfully calculated iRT regression line from 26 shared peptides.

31 Jan 2022 09:11:29,350 INFO : Attempting to calculate iRT regression line from shared peptides.

31 Jan 2022 09:11:29,352 INFO : Successfully calculated iRT regression line from 26 shared peptides.

31 Jan 2022 09:11:29,356 INFO : Attempting to calculate iRT regression line from shared peptides.

31 Jan 2022 09:11:29,357 INFO : Successfully calculated iRT regression line from 26 shared peptides.

31 Jan 2022 09:11:29,361 INFO : Attempting to calculate iRT regression line from shared peptides.

31 Jan 2022 09:11:29,362 INFO : Successfully calculated iRT regression line from 26 shared peptides.

31 Jan 2022 09:11:29,366 INFO : Attempting to calculate iRT regression line from shared peptides.

31 Jan 2022 09:11:29,367 INFO : Successfully calculated iRT regression line from 26 shared peptides.

31 Jan 2022 09:11:29,370 INFO : Attempting to calculate iRT regression line from shared peptides.

31 Jan 2022 09:11:29,371 INFO : Successfully calculated iRT regression line from 26 shared peptides.

31 Jan 2022 09:11:29,375 INFO : Attempting to calculate iRT regression line from shared peptides.

31 Jan 2022 09:11:29,377 INFO : Successfully calculated iRT regression line from 26 shared peptides.

31 Jan 2022 09:11:29,380 INFO : Attempting to calculate iRT regression line from shared peptides.

31 Jan 2022 09:11:29,382 INFO : Successfully calculated iRT regression line from 26 shared peptides.

31 Jan 2022 09:11:29,386 INFO : Attempting to calculate iRT regression line from shared peptides.

31 Jan 2022 09:11:29,387 INFO : Successfully calculated iRT regression line from 26 shared peptides.

31 Jan 2022 09:11:29,391 INFO : Attempting to calculate iRT regression line from shared peptides.

31 Jan 2022 09:11:29,392 INFO : Successfully calculated iRT regression line from 26 shared peptides.

31 Jan 2022 09:11:29,396 INFO : Attempting to calculate iRT regression line from shared peptides.

31 Jan 2022 09:11:29,396 INFO : Successfully calculated iRT regression line from 26 shared peptides.

31 Jan 2022 09:11:29,400 INFO : Attempting to calculate iRT regression line from shared peptides.

31 Jan 2022 09:11:29,401 INFO : Successfully calculated iRT regression line from 26 shared peptides.

31 Jan 2022 09:11:29,405 INFO : Attempting to calculate iRT regression line from shared peptides.

31 Jan 2022 09:11:29,406 INFO : Successfully calculated iRT regression line from 26 shared peptides.

31 Jan 2022 09:11:29,410 INFO : Attempting to calculate iRT regression line from shared peptides.

31 Jan 2022 09:11:29,411 INFO : Successfully calculated iRT regression line from 26 shared peptides.

31 Jan 2022 09:11:29,415 INFO : Attempting to calculate iRT regression line from shared peptides.

31 Jan 2022 09:11:29,415 INFO : Successfully calculated iRT regression line from 26 shared peptides.

31 Jan 2022 09:11:29,419 INFO : Attempting to calculate iRT regression line from shared peptides.

31 Jan 2022 09:11:29,420 INFO : Successfully calculated iRT regression line from 26 shared peptides.

31 Jan 2022 09:11:29,424 INFO : Attempting to calculate iRT regression line from shared peptides.

31 Jan 2022 09:11:29,425 INFO : Successfully calculated iRT regression line from 26 shared peptides.

31 Jan 2022 09:11:29,429 INFO : Attempting to calculate iRT regression line from shared peptides.

31 Jan 2022 09:11:29,430 INFO : Successfully calculated iRT regression line from 26 shared peptides.

31 Jan 2022 09:11:29,434 INFO : Attempting to calculate iRT regression line from shared peptides.

31 Jan 2022 09:11:29,434 INFO : Successfully calculated iRT regression line from 26 shared peptides.

31 Jan 2022 09:11:29,439 INFO : Attempting to calculate iRT regression line from shared peptides.

31 Jan 2022 09:11:29,440 INFO : Successfully calculated iRT regression line from 26 shared peptides.

31 Jan 2022 09:11:29,444 INFO : Attempting to calculate iRT regression line from shared peptides.

31 Jan 2022 09:11:29,445 INFO : Successfully calculated iRT regression line from 26 shared peptides.

31 Jan 2022 09:11:29,449 INFO : Attempting to calculate iRT regression line from shared peptides.

31 Jan 2022 09:11:29,450 INFO : Successfully calculated iRT regression line from 25 shared peptides.

31 Jan 2022 09:11:29,454 INFO : Attempting to calculate iRT regression line from shared peptides.

31 Jan 2022 09:11:29,454 INFO : Successfully calculated iRT regression line from 26 shared peptides.

31 Jan 2022 09:11:29,458 INFO : Attempting to calculate iRT regression line from shared peptides.

31 Jan 2022 09:11:29,459 INFO : Successfully calculated iRT regression line from 26 shared peptides.

31 Jan 2022 09:11:29,463 INFO : Attempting to calculate iRT regression line from shared peptides.

31 Jan 2022 09:11:29,464 INFO : Successfully calculated iRT regression line from 26 shared peptides.

31 Jan 2022 09:11:29,468 INFO : Attempting to calculate iRT regression line from shared peptides.

31 Jan 2022 09:11:29,468 INFO : Successfully calculated iRT regression line from 26 shared peptides.

31 Jan 2022 09:11:29,472 INFO : Attempting to calculate iRT regression line from shared peptides.

31 Jan 2022 09:11:29,473 INFO : Successfully calculated iRT regression line from 26 shared peptides.

31 Jan 2022 09:11:29,477 INFO : Attempting to calculate iRT regression line from shared peptides.

31 Jan 2022 09:11:29,478 INFO : Successfully calculated iRT regression line from 26 shared peptides.

31 Jan 2022 09:11:29,482 INFO : Attempting to calculate iRT regression line from shared peptides.

31 Jan 2022 09:11:29,483 INFO : Successfully calculated iRT regression line from 26 shared peptides.

31 Jan 2022 09:11:29,487 INFO : Attempting to calculate iRT regression line from shared peptides.

31 Jan 2022 09:11:29,488 INFO : Successfully calculated iRT regression line from 26 shared peptides.

31 Jan 2022 09:11:29,493 INFO : Attempting to calculate iRT regression line from shared peptides.

31 Jan 2022 09:11:29,494 INFO : Successfully calculated iRT regression line from 26 shared peptides.

31 Jan 2022 09:11:29,498 INFO : Attempting to calculate iRT regression line from shared peptides.

31 Jan 2022 09:11:29,499 INFO : Successfully calculated iRT regression line from 26 shared peptides.

31 Jan 2022 09:11:29,503 INFO : Attempting to calculate iRT regression line from shared peptides.

31 Jan 2022 09:11:29,504 INFO : Successfully calculated iRT regression line from 25 shared peptides.

31 Jan 2022 09:11:29,508 INFO : Attempting to calculate iRT regression line from shared peptides.

31 Jan 2022 09:11:29,509 INFO : Successfully calculated iRT regression line from 26 shared peptides.

31 Jan 2022 09:11:29,514 INFO : Attempting to calculate iRT regression line from shared peptides.

31 Jan 2022 09:11:29,514 INFO : Successfully calculated iRT regression line from 26 shared peptides.

31 Jan 2022 09:11:29,518 INFO : Attempting to calculate iRT regression line from shared peptides.

31 Jan 2022 09:11:29,519 INFO : Successfully calculated iRT regression line from 26 shared peptides.

31 Jan 2022 09:11:29,520 INFO : Finished calculating iRT correlations for all samples

31 Jan 2022 09:11:31,927 INFO : Creating and populating temp tables for Proportion values

31 Jan 2022 09:11:32,106 INFO : Setting PrecursorModifiedAreaProportion values on precursorchrominfo

31 Jan 2022 09:11:32,955 INFO : Setting ModifiedAreaProportion values on generalmoleculechrominfo

31 Jan 2022 09:11:33,589 INFO : Cleaning up temp tables

31 Jan 2022 09:11:33,846 INFO : Completed import of Skyline document from 220111_PDX-Lipids_dMRM_2022-01-31_13-25-00.sky.zip

31 Jan 2022 09:11:33,849 INFO : 100% Done

31 Jan 2022 09:11:33,854 DEBUG: Finished trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/QIMRBerghofer%20-%20Targeted%20Lipidomics%20-%20Imetelstat%20Is%20a%20Potent%20Inducer%20of%20Ferroptosis_05649c78-64e4-103a-93e1-fea6ddf5fdda/_temp__2022-01-31_09-04-45/export/xar/experiments_and_runs.xar.exploded/Run126858/220111_PDX-Lipids_dMRM_2022-01-31_13-25-00.sky.zip into the system

31 Jan 2022 09:11:33,863 INFO : Done importing xar

31 Jan 2022 09:11:33,865 INFO : Loading pages and webpart properties

31 Jan 2022 09:11:33,941 INFO : Done importing 4 page(s) with 7 webpart(s)

31 Jan 2022 09:11:33,942 INFO : Importing files metadata.

31 Jan 2022 09:11:33,942 DEBUG: [/Panorama Public/2022/QIMRBerghofer - Targeted Lipidomics - Imetelstat Is a Potent Inducer of Ferroptosis]  Reading files metadata from /data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/QIMRBerghofer - Targeted Lipidomics - Imetelstat Is a Potent Inducer of Ferroptosis_05649c78-64e4-103a-93e1-fea6ddf5fdda/_temp__2022-01-31_09-04-45/export

31 Jan 2022 09:11:33,943 INFO :

31 Jan 2022 09:11:33,943 INFO : Experiment import completed successfully.

31 Jan 2022 09:11:33,943 INFO : Successfully completed task 'org.labkey.panoramapublic.pipeline.ExperimentImportTask'

31 Jan 2022 09:17:08,725 INFO : Starting to run task 'org.labkey.panoramapublic.pipeline.UpdateFolderTypeTask' at location 'webserver-high-priority'

31 Jan 2022 09:17:08,725 INFO :

31 Jan 2022 09:17:08,726 INFO : Updating the folder type.

31 Jan 2022 09:17:08,728 INFO : Setting the TargetedMS folder type to 'Experimental Data' for folder '/Panorama Public/2022/QIMRBerghofer - Targeted Lipidomics - Imetelstat Is a Potent Inducer of Ferroptosis'.

31 Jan 2022 09:17:08,730 INFO : Successfully completed task 'org.labkey.panoramapublic.pipeline.UpdateFolderTypeTask'

31 Jan 2022 09:17:08,765 INFO : Starting to run task 'org.labkey.panoramapublic.pipeline.CopyExperimentFinalTask' at location 'webserver-high-priority'

31 Jan 2022 09:17:08,765 INFO :

31 Jan 2022 09:17:08,765 INFO : Finishing up experiment copy.

31 Jan 2022 09:17:08,775 INFO : Creating a new TargetedMS experiment entry in panoramapublic.ExperimentAnnotations.

31 Jan 2022 09:17:08,775 INFO : Setting version on new experiment to 2

31 Jan 2022 09:17:08,775 INFO : Copying DOI from the previous copy of the data.

31 Jan 2022 09:17:08,779 INFO : Updating access URL to point to the new copy of the data.

31 Jan 2022 09:17:08,788 INFO : Removing copy permissions given to Panorama Public

31 Jan 2022 09:17:08,804 INFO : Adding read permissions to all users that are folder admins in the source folder.

31 Jan 2022 09:17:08,805 INFO : Adding read permissions to all users that had read access to previous copy.

31 Jan 2022 09:17:08,815 INFO : Updating the 'Raw Data' tab configuration

31 Jan 2022 09:17:08,818 INFO : Updating dataFileUrls for run 200916_NB4Lipids_dMRM_2021-06-08_13-47-21.sky.zip; targetedms run ID 130109

31 Jan 2022 09:17:08,818 INFO : Updating dataFileUrl...

31 Jan 2022 09:17:08,818 INFO : from: file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/QIMRBerghofer%20-%20Targeted%20Lipidomics%20-%20Imetelstat%20Is%20a%20Potent%20Inducer%20of%20Ferroptosis_05649c78-64e4-103a-93e1-fea6ddf5fdda/_temp__2022-01-31_09-04-45/export/xar/experiments_and_runs.xar.exploded/Run111109/200916_NB4Lipids_dMRM_2021-06-08_13-47-21/200916_NB4Lipids_dMRM.skyd

31 Jan 2022 09:17:08,818 INFO : to: file:///data/labkey/files/Panorama%20Public/2022/QIMRBerghofer%20-%20Targeted%20Lipidomics%20-%20Imetelstat%20Is%20a%20Potent%20Inducer%20of%20Ferroptosis/@files/200916_NB4Lipids_dMRM_2021-06-08_13-47-21/200916_NB4Lipids_dMRM.skyd

31 Jan 2022 09:17:08,821 INFO : Updating dataFileUrl...

31 Jan 2022 09:17:08,821 INFO : from: file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/QIMRBerghofer%20-%20Targeted%20Lipidomics%20-%20Imetelstat%20Is%20a%20Potent%20Inducer%20of%20Ferroptosis_05649c78-64e4-103a-93e1-fea6ddf5fdda/_temp__2022-01-31_09-04-45/export/xar/experiments_and_runs.xar.exploded/Run111109/200916_NB4Lipids_dMRM_2021-06-08_13-47-21.sky.zip

31 Jan 2022 09:17:08,821 INFO : to: file:///data/labkey/files/Panorama%20Public/2022/QIMRBerghofer%20-%20Targeted%20Lipidomics%20-%20Imetelstat%20Is%20a%20Potent%20Inducer%20of%20Ferroptosis/@files/200916_NB4Lipids_dMRM_2021-06-08_13-47-21.sky.zip

31 Jan 2022 09:17:08,825 INFO : Updating dataFileUrls for run 220111_PDX-Lipids_dMRM_2022-01-31_13-25-00.sky.zip; targetedms run ID 130111

31 Jan 2022 09:17:08,825 INFO : Updating dataFileUrl...

31 Jan 2022 09:17:08,825 INFO : from: file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/QIMRBerghofer%20-%20Targeted%20Lipidomics%20-%20Imetelstat%20Is%20a%20Potent%20Inducer%20of%20Ferroptosis_05649c78-64e4-103a-93e1-fea6ddf5fdda/_temp__2022-01-31_09-04-45/export/xar/experiments_and_runs.xar.exploded/Run126858/220111_PDX-Lipids_dMRM_2022-01-31_13-25-00/220111_PDX-Lipids_dMRM.skyd

31 Jan 2022 09:17:08,825 INFO : to: file:///data/labkey/files/Panorama%20Public/2022/QIMRBerghofer%20-%20Targeted%20Lipidomics%20-%20Imetelstat%20Is%20a%20Potent%20Inducer%20of%20Ferroptosis/@files/220111_PDX-Lipids_dMRM_2022-01-31_13-25-00/220111_PDX-Lipids_dMRM.skyd

31 Jan 2022 09:17:08,828 INFO : Updating dataFileUrl...

31 Jan 2022 09:17:08,828 INFO : from: file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/QIMRBerghofer%20-%20Targeted%20Lipidomics%20-%20Imetelstat%20Is%20a%20Potent%20Inducer%20of%20Ferroptosis_05649c78-64e4-103a-93e1-fea6ddf5fdda/_temp__2022-01-31_09-04-45/export/xar/experiments_and_runs.xar.exploded/Run126858/220111_PDX-Lipids_dMRM_2022-01-31_13-25-00.sky.zip

31 Jan 2022 09:17:08,828 INFO : to: file:///data/labkey/files/Panorama%20Public/2022/QIMRBerghofer%20-%20Targeted%20Lipidomics%20-%20Imetelstat%20Is%20a%20Potent%20Inducer%20of%20Ferroptosis/@files/220111_PDX-Lipids_dMRM_2022-01-31_13-25-00.sky.zip

31 Jan 2022 09:17:08,830 INFO : Hiding the Data Pipeline tab.

31 Jan 2022 09:17:08,834 INFO : Creating a new versioned URL for the previous copy of the data: ImetelstatLipidomics_v1

31 Jan 2022 09:17:08,839 INFO : Setting the short access URL on the previous copy to ImetelstatLipidomics_v1

31 Jan 2022 09:17:08,839 INFO : Removing DOI from the previous copy

31 Jan 2022 09:17:08,843 INFO : Updating Submission. Setting copiedExperimentId to 1378

31 Jan 2022 09:17:09,024 INFO : Emailing submitter.

31 Jan 2022 09:17:09,240 INFO : Successfully completed task 'org.labkey.panoramapublic.pipeline.CopyExperimentFinalTask'