17 Aug 2021 20:17:04,478 INFO : Copying experiment "Simultaneous quantitative profiling of clinically relevant immune markers in neonatal stool swabs to reveal inflammation" from folder /U of Masaryk - RECETOX/Vidova et al. Sci Rep 2021 Supplementary to /Panorama Public/2021/U of Masaryk RECETOX - Vidova et al. Sci Rep 2021 Supplementary
17 Aug 2021 20:17:04,478 INFO : =======================================
17 Aug 2021 20:17:04,692 INFO : Starting to run task 'org.labkey.panoramapublic.pipeline.ExperimentExportTask' at location 'webserver-high-priority'
17 Aug 2021 20:17:04,692 INFO :
17 Aug 2021 20:17:04,692 INFO : Exporting experiment.
17 Aug 2021 20:18:02,916 INFO :
17 Aug 2021 20:18:02,916 INFO : Experiment export completed successfully.
17 Aug 2021 20:18:02,916 INFO : Successfully completed task 'org.labkey.panoramapublic.pipeline.ExperimentExportTask'
17 Aug 2021 20:18:02,978 INFO : Starting to run task 'org.labkey.panoramapublic.pipeline.ExperimentImportTask' at location 'webserver-high-priority'
17 Aug 2021 20:18:02,978 INFO :
17 Aug 2021 20:18:02,979 INFO : Importing experiment.
17 Aug 2021 20:18:02,984 INFO : Loading folder properties (folder type, settings and active modules)
17 Aug 2021 20:18:03,068 INFO : Done importing folder properties (folder type, settings and active modules)
17 Aug 2021 20:18:03,072 INFO : Loading etl definitions
17 Aug 2021 20:18:03,075 INFO : Loading wikis
17 Aug 2021 20:18:03,077 INFO : 0 wikis imported
17 Aug 2021 20:18:03,077 INFO : Done importing wikis
17 Aug 2021 20:18:03,078 INFO : Starting to copy files
17 Aug 2021 20:18:23,753 INFO : Copied 561 files
17 Aug 2021 20:18:23,753 INFO : Ensuring exp.data rows exist for imported files
17 Aug 2021 20:18:26,066 INFO : Starting Sample Type and Data Class import
17 Aug 2021 20:18:26,067 INFO : No types XAR file to process.
17 Aug 2021 20:18:26,067 INFO : Finished importing Sample Types and Data Classes
17 Aug 2021 20:18:26,069 INFO : Loading xar
17 Aug 2021 20:18:28,487 DEBUG: Finished loading Protocol with LSID 'urn:lsid:uw.edu:Protocol.Folder-9018:TargetedMS.ImportSkyZip'
17 Aug 2021 20:18:28,489 DEBUG: Finished loading Protocol with LSID 'urn:lsid:uw.edu:Protocol.Folder-9018:TargetedMS.ImportSkyZip.Core'
17 Aug 2021 20:18:28,492 DEBUG: Finished loading Protocol with LSID 'urn:lsid:uw.edu:Protocol.Folder-9018:TargetedMS.ImportSkyZip.Output'
17 Aug 2021 20:18:28,492 DEBUG: Protocol import complete
17 Aug 2021 20:18:28,494 DEBUG: Finished loading Experiment with LSID 'urn:lsid:uw.edu:Experiment.Folder-9018:Simultaneous+quantitative+profiling+of+clinically+relevant+immune+markers+in+neonatal+stool+swabs+to+reveal+inflammation'
17 Aug 2021 20:18:28,494 DEBUG: Experiment/Run group import complete
17 Aug 2021 20:18:28,503 DEBUG: Protocol action set import complete
17 Aug 2021 20:18:28,518 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-9018:TargetedMS.ImportSkyZip'
17 Aug 2021 20:18:28,526 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:UploadedFile.Folder-9018:546bb779-d8e0-1039-a2b1-fea6ddf522ee'
17 Aug 2021 20:18:28,531 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:skyd.Folder-9018:546bb793-d8e0-1039-a2b1-fea6ddf522ee'
17 Aug 2021 20:18:28,531 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-9018:TargetedMS.ImportSkyZip.Core'
17 Aug 2021 20:18:28,534 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-9018:TargetedMS.ImportSkyZip.Output'
17 Aug 2021 20:18:28,535 DEBUG: Finished loading ExperimentRun with LSID 'urn:lsid:uw.edu:Run.Folder-9018:546bb7ab-d8e0-1039-a2b1-fea6ddf522ee'
17 Aug 2021 20:18:28,544 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-9018:TargetedMS.ImportSkyZip'
17 Aug 2021 20:18:28,549 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:UploadedFile.Folder-9018:1521b65e-dc47-1039-a2b1-fea6ddf522ee'
17 Aug 2021 20:18:28,553 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:skyd.Folder-9018:1521b67a-dc47-1039-a2b1-fea6ddf522ee'
17 Aug 2021 20:18:28,554 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-9018:TargetedMS.ImportSkyZip.Core'
17 Aug 2021 20:18:28,556 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-9018:TargetedMS.ImportSkyZip.Output'
17 Aug 2021 20:18:28,557 DEBUG: Finished loading ExperimentRun with LSID 'urn:lsid:uw.edu:Run.Folder-9018:1521b695-dc47-1039-a2b1-fea6ddf522ee'
17 Aug 2021 20:18:28,567 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-9018:TargetedMS.ImportSkyZip'
17 Aug 2021 20:18:28,572 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:UploadedFile.Folder-9018:f9aa1cdc-dc4e-1039-a2b1-fea6ddf522ee'
17 Aug 2021 20:18:28,577 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:skyd.Folder-9018:f9aa1d12-dc4e-1039-a2b1-fea6ddf522ee'
17 Aug 2021 20:18:28,577 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-9018:TargetedMS.ImportSkyZip.Core'
17 Aug 2021 20:18:28,579 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-9018:TargetedMS.ImportSkyZip.Output'
17 Aug 2021 20:18:28,580 DEBUG: Finished loading ExperimentRun with LSID 'urn:lsid:uw.edu:Run.Folder-9018:f9aa1d52-dc4e-1039-a2b1-fea6ddf522ee'
17 Aug 2021 20:18:28,589 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-9018:TargetedMS.ImportSkyZip'
17 Aug 2021 20:18:28,594 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:UploadedFile.Folder-9018:6ef2d79a-dcb0-1039-a2b1-fea6ddf522ee'
17 Aug 2021 20:18:28,599 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:skyd.Folder-9018:6ef2d7ac-dcb0-1039-a2b1-fea6ddf522ee'
17 Aug 2021 20:18:28,599 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-9018:TargetedMS.ImportSkyZip.Core'
17 Aug 2021 20:18:28,601 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-9018:TargetedMS.ImportSkyZip.Output'
17 Aug 2021 20:18:28,602 DEBUG: Finished loading ExperimentRun with LSID 'urn:lsid:uw.edu:Run.Folder-9018:6ef2d7b6-dcb0-1039-a2b1-fea6ddf522ee'
17 Aug 2021 20:18:28,614 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-9018:TargetedMS.ImportSkyZip'
17 Aug 2021 20:18:28,619 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:UploadedFile.Folder-9018:1231cd66-dcb2-1039-a2b1-fea6ddf522ee'
17 Aug 2021 20:18:28,623 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:skyd.Folder-9018:1231cf95-dcb2-1039-a2b1-fea6ddf522ee'
17 Aug 2021 20:18:28,623 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-9018:TargetedMS.ImportSkyZip.Core'
17 Aug 2021 20:18:28,625 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-9018:TargetedMS.ImportSkyZip.Output'
17 Aug 2021 20:18:28,626 DEBUG: Finished loading ExperimentRun with LSID 'urn:lsid:uw.edu:Run.Folder-9018:1231cf9c-dcb2-1039-a2b1-fea6ddf522ee'
17 Aug 2021 20:18:28,636 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-9018:TargetedMS.ImportSkyZip'
17 Aug 2021 20:18:28,641 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:UploadedFile.Folder-9018:fe1b6281-dcc5-1039-a2b1-fea6ddf522ee'
17 Aug 2021 20:18:28,645 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:skyd.Folder-9018:fe1b62a0-dcc5-1039-a2b1-fea6ddf522ee'
17 Aug 2021 20:18:28,646 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-9018:TargetedMS.ImportSkyZip.Core'
17 Aug 2021 20:18:28,648 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-9018:TargetedMS.ImportSkyZip.Output'
17 Aug 2021 20:18:28,649 DEBUG: Finished loading ExperimentRun with LSID 'urn:lsid:uw.edu:Run.Folder-9018:fe1b62a3-dcc5-1039-a2b1-fea6ddf522ee'
17 Aug 2021 20:18:28,662 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-9018:TargetedMS.ImportSkyZip'
17 Aug 2021 20:18:28,667 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:UploadedFile.Folder-9018:7ebd0bc6-dcc7-1039-a2b1-fea6ddf522ee'
17 Aug 2021 20:18:28,672 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:skyd.Folder-9018:7ebd0bd5-dcc7-1039-a2b1-fea6ddf522ee'
17 Aug 2021 20:18:28,672 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-9018:TargetedMS.ImportSkyZip.Core'
17 Aug 2021 20:18:28,674 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-9018:TargetedMS.ImportSkyZip.Output'
17 Aug 2021 20:18:28,675 DEBUG: Finished loading ExperimentRun with LSID 'urn:lsid:uw.edu:Run.Folder-9018:7ebd0bdb-dcc7-1039-a2b1-fea6ddf522ee'
17 Aug 2021 20:18:28,685 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-9018:TargetedMS.ImportSkyZip'
17 Aug 2021 20:18:28,694 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:skyd.Folder-9018:b6bbf1a9-dd0b-1039-a2b1-fea6ddf522ee'
17 Aug 2021 20:18:28,699 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:UploadedFile.Folder-9018:b6bbf187-dd0b-1039-a2b1-fea6ddf522ee'
17 Aug 2021 20:18:28,699 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-9018:TargetedMS.ImportSkyZip.Core'
17 Aug 2021 20:18:28,702 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-9018:TargetedMS.ImportSkyZip.Output'
17 Aug 2021 20:18:28,703 DEBUG: Finished loading ExperimentRun with LSID 'urn:lsid:uw.edu:Run.Folder-9018:b6bbf1cb-dd0b-1039-a2b1-fea6ddf522ee'
17 Aug 2021 20:18:28,716 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-9018:TargetedMS.ImportSkyZip'
17 Aug 2021 20:18:28,722 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:UploadedFile.Folder-9018:48383f0f-dd0e-1039-a2b1-fea6ddf522ee'
17 Aug 2021 20:18:28,727 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:skyd.Folder-9018:48383f30-dd0e-1039-a2b1-fea6ddf522ee'
17 Aug 2021 20:18:28,728 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-9018:TargetedMS.ImportSkyZip.Core'
17 Aug 2021 20:18:28,730 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-9018:TargetedMS.ImportSkyZip.Output'
17 Aug 2021 20:18:28,731 DEBUG: Finished loading ExperimentRun with LSID 'urn:lsid:uw.edu:Run.Folder-9018:48383f33-dd0e-1039-a2b1-fea6ddf522ee'
17 Aug 2021 20:18:28,742 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-9018:TargetedMS.ImportSkyZip'
17 Aug 2021 20:18:28,748 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:UploadedFile.Folder-9018:d2aef02c-dd0f-1039-a2b1-fea6ddf522ee'
17 Aug 2021 20:18:28,752 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:skyd.Folder-9018:d2aef251-dd0f-1039-a2b1-fea6ddf522ee'
17 Aug 2021 20:18:28,753 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-9018:TargetedMS.ImportSkyZip.Core'
17 Aug 2021 20:18:28,755 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-9018:TargetedMS.ImportSkyZip.Output'
17 Aug 2021 20:18:28,755 DEBUG: Finished loading ExperimentRun with LSID 'urn:lsid:uw.edu:Run.Folder-9018:d2aef25a-dd0f-1039-a2b1-fea6ddf522ee'
17 Aug 2021 20:18:28,765 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-9018:TargetedMS.ImportSkyZip'
17 Aug 2021 20:18:28,772 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:UploadedFile.Folder-9018:d4d7034f-dd12-1039-a2b1-fea6ddf522ee'
17 Aug 2021 20:18:28,777 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:skyd.Folder-9018:d4d70384-dd12-1039-a2b1-fea6ddf522ee'
17 Aug 2021 20:18:28,777 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-9018:TargetedMS.ImportSkyZip.Core'
17 Aug 2021 20:18:28,780 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-9018:TargetedMS.ImportSkyZip.Output'
17 Aug 2021 20:18:28,780 DEBUG: Finished loading ExperimentRun with LSID 'urn:lsid:uw.edu:Run.Folder-9018:d4d7038d-dd12-1039-a2b1-fea6ddf522ee'
17 Aug 2021 20:18:28,788 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-9018:TargetedMS.ImportSkyZip'
17 Aug 2021 20:18:28,794 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:skyd.Folder-9018:02b58c60-dd19-1039-a2b1-fea6ddf522ee'
17 Aug 2021 20:18:28,799 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:UploadedFile.Folder-9018:02b58c4b-dd19-1039-a2b1-fea6ddf522ee'
17 Aug 2021 20:18:28,800 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-9018:TargetedMS.ImportSkyZip.Core'
17 Aug 2021 20:18:28,802 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-9018:TargetedMS.ImportSkyZip.Output'
17 Aug 2021 20:18:28,803 DEBUG: Finished loading ExperimentRun with LSID 'urn:lsid:uw.edu:Run.Folder-9018:02b58c63-dd19-1039-a2b1-fea6ddf522ee'
17 Aug 2021 20:18:28,813 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-9018:TargetedMS.ImportSkyZip'
17 Aug 2021 20:18:28,818 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:UploadedFile.Folder-9018:02b5a221-dd19-1039-a2b1-fea6ddf522ee'
17 Aug 2021 20:18:28,822 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:skyd.Folder-9018:02b5a24a-dd19-1039-a2b1-fea6ddf522ee'
17 Aug 2021 20:18:28,822 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-9018:TargetedMS.ImportSkyZip.Core'
17 Aug 2021 20:18:28,824 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-9018:TargetedMS.ImportSkyZip.Output'
17 Aug 2021 20:18:28,825 DEBUG: Finished loading ExperimentRun with LSID 'urn:lsid:uw.edu:Run.Folder-9018:02b5a24d-dd19-1039-a2b1-fea6ddf522ee'
17 Aug 2021 20:18:28,827 DEBUG: Trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/U%20of%20Masaryk%20RECETOX%20-%20Vidova%20et%20al.%20Sci%20Rep%202021%20Supplementary_673e4f17-e200-1039-a2b1-fea6ddf522ee/_temp__2021-08-17_20-17-03/export/xar/experiments_and_runs.xar.exploded/Run115194/Matrix%20effect%20on%20protein%20quantification.sky.zip into the system
17 Aug 2021 20:18:28,830 INFO : Starting import from Matrix effect on protein quantification.sky.zip
17 Aug 2021 20:18:28,835 INFO : Starting to import Skyline document from Matrix effect on protein quantification.sky.zip
17 Aug 2021 20:18:28,837 INFO : Expanding Matrix effect on protein quantification.skyd
17 Aug 2021 20:18:28,909 INFO : Expanding Matrix effect on protein quantification.sky.view
17 Aug 2021 20:18:28,909 INFO : Expanding Matrix effect on protein quantification.sky
17 Aug 2021 20:18:28,926 INFO : 2% Done
17 Aug 2021 20:18:28,971 DEBUG: Starting to load chromatogram headers
17 Aug 2021 20:18:28,975 DEBUG: Done loading chromatogram headers
17 Aug 2021 20:18:29,045 INFO : Inserting P01009
17 Aug 2021 20:18:29,069 INFO : 14% Done
17 Aug 2021 20:18:29,188 DEBUG: Total peptides inserted: 1
17 Aug 2021 20:18:29,188 INFO : Inserting P01876
17 Aug 2021 20:18:29,200 INFO : 24% Done
17 Aug 2021 20:18:29,281 DEBUG: Total peptides inserted: 1
17 Aug 2021 20:18:29,281 INFO : Inserting P01877
17 Aug 2021 20:18:29,293 INFO : 33% Done
17 Aug 2021 20:18:29,367 DEBUG: Total peptides inserted: 1
17 Aug 2021 20:18:29,367 INFO : Inserting P05109
17 Aug 2021 20:18:29,375 INFO : 43% Done
17 Aug 2021 20:18:29,467 DEBUG: Total peptides inserted: 1
17 Aug 2021 20:18:29,467 INFO : Inserting P12724
17 Aug 2021 20:18:29,475 INFO : 52% Done
17 Aug 2021 20:18:29,529 DEBUG: Total peptides inserted: 1
17 Aug 2021 20:18:29,529 INFO : Inserting P06702
17 Aug 2021 20:18:29,540 INFO : 62% Done
17 Aug 2021 20:18:29,607 INFO : 71% Done
17 Aug 2021 20:18:29,657 DEBUG: Total peptides inserted: 2
17 Aug 2021 20:18:29,657 INFO : Inserting P10153
17 Aug 2021 20:18:29,664 INFO : 80% Done
17 Aug 2021 20:18:29,717 DEBUG: Total peptides inserted: 1
17 Aug 2021 20:18:29,718 INFO : Inserting P05164
17 Aug 2021 20:18:29,722 INFO : 87% Done
17 Aug 2021 20:18:29,762 DEBUG: Total peptides inserted: 1
17 Aug 2021 20:18:29,762 INFO : Inserting P01876+P01877
17 Aug 2021 20:18:29,770 INFO : 98% Done
17 Aug 2021 20:18:29,833 DEBUG: Total peptides inserted: 1
17 Aug 2021 20:18:29,834 INFO : Done parsing Skyline document.
17 Aug 2021 20:18:29,835 INFO : Creating and populating temp tables for Proportion values
17 Aug 2021 20:18:29,849 INFO : Setting PrecursorModifiedAreaProportion values on precursorchrominfo
17 Aug 2021 20:18:29,866 INFO : Setting ModifiedAreaProportion values on generalmoleculechrominfo
17 Aug 2021 20:18:29,873 INFO : Cleaning up temp tables
17 Aug 2021 20:18:30,123 INFO : Completed import of Skyline document from Matrix effect on protein quantification.sky.zip
17 Aug 2021 20:18:30,126 INFO : 100% Done
17 Aug 2021 20:18:30,132 DEBUG: Finished trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/U%20of%20Masaryk%20RECETOX%20-%20Vidova%20et%20al.%20Sci%20Rep%202021%20Supplementary_673e4f17-e200-1039-a2b1-fea6ddf522ee/_temp__2021-08-17_20-17-03/export/xar/experiments_and_runs.xar.exploded/Run115194/Matrix%20effect%20on%20protein%20quantification.sky.zip into the system
17 Aug 2021 20:18:30,132 DEBUG: Trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/U%20of%20Masaryk%20RECETOX%20-%20Vidova%20et%20al.%20Sci%20Rep%202021%20Supplementary_673e4f17-e200-1039-a2b1-fea6ddf522ee/_temp__2021-08-17_20-17-03/export/xar/experiments_and_runs.xar.exploded/Run115194/Matrix%20effect%20on%20protein%20quantification/Matrix%20effect%20on%20protein%20quantification.skyd into the system
17 Aug 2021 20:18:30,133 DEBUG: Finished trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/U%20of%20Masaryk%20RECETOX%20-%20Vidova%20et%20al.%20Sci%20Rep%202021%20Supplementary_673e4f17-e200-1039-a2b1-fea6ddf522ee/_temp__2021-08-17_20-17-03/export/xar/experiments_and_runs.xar.exploded/Run115194/Matrix%20effect%20on%20protein%20quantification/Matrix%20effect%20on%20protein%20quantification.skyd into the system
17 Aug 2021 20:18:30,133 DEBUG: Trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/U%20of%20Masaryk%20RECETOX%20-%20Vidova%20et%20al.%20Sci%20Rep%202021%20Supplementary_673e4f17-e200-1039-a2b1-fea6ddf522ee/_temp__2021-08-17_20-17-03/export/xar/experiments_and_runs.xar.exploded/Run115403/Trypsin%20digestion%20time%20lapse.sky.zip into the system
17 Aug 2021 20:18:30,135 INFO : Starting import from Trypsin digestion time lapse.sky.zip
17 Aug 2021 20:18:30,138 INFO : Starting to import Skyline document from Trypsin digestion time lapse.sky.zip
17 Aug 2021 20:18:30,140 INFO : Expanding Trypsin digestion time lapse.skyd
17 Aug 2021 20:18:30,212 INFO : Expanding Trypsin digestion time lapse.sky.view
17 Aug 2021 20:18:30,213 INFO : Expanding Trypsin digestion time lapse.sky
17 Aug 2021 20:18:30,225 INFO : 2% Done
17 Aug 2021 20:18:30,261 DEBUG: Starting to load chromatogram headers
17 Aug 2021 20:18:30,262 DEBUG: Done loading chromatogram headers
17 Aug 2021 20:18:30,314 INFO : Inserting P01876
17 Aug 2021 20:18:30,324 INFO : 13% Done
17 Aug 2021 20:18:30,402 DEBUG: Total peptides inserted: 1
17 Aug 2021 20:18:30,402 INFO : Inserting P01009
17 Aug 2021 20:18:30,408 INFO : 20% Done
17 Aug 2021 20:18:30,464 DEBUG: Total peptides inserted: 1
17 Aug 2021 20:18:30,464 INFO : Inserting P05109
17 Aug 2021 20:18:30,470 INFO : 29% Done
17 Aug 2021 20:18:30,519 DEBUG: Total peptides inserted: 1
17 Aug 2021 20:18:30,519 INFO : Inserting P12724
17 Aug 2021 20:18:30,525 INFO : 39% Done
17 Aug 2021 20:18:30,577 DEBUG: Total peptides inserted: 1
17 Aug 2021 20:18:30,577 INFO : Inserting P01877
17 Aug 2021 20:18:30,584 INFO : 49% Done
17 Aug 2021 20:18:30,636 DEBUG: Total peptides inserted: 1
17 Aug 2021 20:18:30,636 INFO : Inserting P06702
17 Aug 2021 20:18:30,643 INFO : 59% Done
17 Aug 2021 20:18:30,700 INFO : 70% Done
17 Aug 2021 20:18:30,750 DEBUG: Total peptides inserted: 2
17 Aug 2021 20:18:30,750 INFO : Inserting P10153
17 Aug 2021 20:18:30,757 INFO : 80% Done
17 Aug 2021 20:18:30,810 DEBUG: Total peptides inserted: 1
17 Aug 2021 20:18:30,810 INFO : Inserting P05164
17 Aug 2021 20:18:30,815 INFO : 86% Done
17 Aug 2021 20:18:30,853 DEBUG: Total peptides inserted: 1
17 Aug 2021 20:18:30,853 INFO : Inserting P01876+P01877
17 Aug 2021 20:18:30,859 INFO : 98% Done
17 Aug 2021 20:18:30,919 DEBUG: Total peptides inserted: 1
17 Aug 2021 20:18:30,920 INFO : Done parsing Skyline document.
17 Aug 2021 20:18:30,921 INFO : Creating and populating temp tables for Proportion values
17 Aug 2021 20:18:30,931 INFO : Setting PrecursorModifiedAreaProportion values on precursorchrominfo
17 Aug 2021 20:18:30,947 INFO : Setting ModifiedAreaProportion values on generalmoleculechrominfo
17 Aug 2021 20:18:30,953 INFO : Cleaning up temp tables
17 Aug 2021 20:18:31,159 INFO : Completed import of Skyline document from Trypsin digestion time lapse.sky.zip
17 Aug 2021 20:18:31,162 INFO : 100% Done
17 Aug 2021 20:18:31,165 DEBUG: Finished trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/U%20of%20Masaryk%20RECETOX%20-%20Vidova%20et%20al.%20Sci%20Rep%202021%20Supplementary_673e4f17-e200-1039-a2b1-fea6ddf522ee/_temp__2021-08-17_20-17-03/export/xar/experiments_and_runs.xar.exploded/Run115403/Trypsin%20digestion%20time%20lapse.sky.zip into the system
17 Aug 2021 20:18:31,165 DEBUG: Trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/U%20of%20Masaryk%20RECETOX%20-%20Vidova%20et%20al.%20Sci%20Rep%202021%20Supplementary_673e4f17-e200-1039-a2b1-fea6ddf522ee/_temp__2021-08-17_20-17-03/export/xar/experiments_and_runs.xar.exploded/Run115403/Trypsin%20digestion%20time%20lapse/Trypsin%20digestion%20time%20lapse.skyd into the system
17 Aug 2021 20:18:31,166 DEBUG: Finished trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/U%20of%20Masaryk%20RECETOX%20-%20Vidova%20et%20al.%20Sci%20Rep%202021%20Supplementary_673e4f17-e200-1039-a2b1-fea6ddf522ee/_temp__2021-08-17_20-17-03/export/xar/experiments_and_runs.xar.exploded/Run115403/Trypsin%20digestion%20time%20lapse/Trypsin%20digestion%20time%20lapse.skyd into the system
17 Aug 2021 20:18:31,166 DEBUG: Trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/U%20of%20Masaryk%20RECETOX%20-%20Vidova%20et%20al.%20Sci%20Rep%202021%20Supplementary_673e4f17-e200-1039-a2b1-fea6ddf522ee/_temp__2021-08-17_20-17-03/export/xar/experiments_and_runs.xar.exploded/Run115407/Proteomic%20analysis%20of%20134%20newborn%20samples.sky.zip into the system
17 Aug 2021 20:18:31,167 INFO : Starting import from Proteomic analysis of 134 newborn samples.sky.zip
17 Aug 2021 20:18:31,169 INFO : Starting to import Skyline document from Proteomic analysis of 134 newborn samples.sky.zip
17 Aug 2021 20:18:31,182 INFO : Expanding Proteomics analysis of 134 newborn samples.skyd
17 Aug 2021 20:18:31,609 INFO : Expanding Proteomics analysis of 134 newborn samples.sky.view
17 Aug 2021 20:18:31,609 INFO : Expanding Proteomics analysis of 134 newborn samples.sky
17 Aug 2021 20:18:31,636 INFO : 2% Done
17 Aug 2021 20:18:31,864 DEBUG: Starting to load chromatogram headers
17 Aug 2021 20:18:31,870 DEBUG: Done loading chromatogram headers
17 Aug 2021 20:18:32,008 INFO : Inserting P01876
17 Aug 2021 20:18:32,035 INFO : 12% Done
17 Aug 2021 20:18:32,353 DEBUG: Total peptides inserted: 1
17 Aug 2021 20:18:32,353 INFO : Inserting P01009
17 Aug 2021 20:18:32,379 INFO : 19% Done
17 Aug 2021 20:18:32,587 DEBUG: Total peptides inserted: 1
17 Aug 2021 20:18:32,587 INFO : Inserting P05109
17 Aug 2021 20:18:32,622 INFO : 28% Done
17 Aug 2021 20:18:32,887 DEBUG: Total peptides inserted: 1
17 Aug 2021 20:18:32,887 INFO : Inserting P12724
17 Aug 2021 20:18:32,909 INFO : 38% Done
17 Aug 2021 20:18:33,216 DEBUG: Total peptides inserted: 1
17 Aug 2021 20:18:33,217 INFO : Inserting P01877
17 Aug 2021 20:18:33,241 INFO : 49% Done
17 Aug 2021 20:18:33,550 DEBUG: Total peptides inserted: 1
17 Aug 2021 20:18:33,550 INFO : Inserting P06702
17 Aug 2021 20:18:33,574 INFO : 59% Done
17 Aug 2021 20:18:33,910 INFO : 70% Done
17 Aug 2021 20:18:34,210 DEBUG: Total peptides inserted: 2
17 Aug 2021 20:18:34,210 INFO : Inserting P10153
17 Aug 2021 20:18:34,234 INFO : 79% Done
17 Aug 2021 20:18:34,529 DEBUG: Total peptides inserted: 1
17 Aug 2021 20:18:34,530 INFO : Inserting P05164
17 Aug 2021 20:18:34,545 INFO : 86% Done
17 Aug 2021 20:18:34,778 DEBUG: Total peptides inserted: 1
17 Aug 2021 20:18:34,778 INFO : Inserting P01876+P01877
17 Aug 2021 20:18:34,811 INFO : 98% Done
17 Aug 2021 20:18:35,173 DEBUG: Total peptides inserted: 1
17 Aug 2021 20:18:35,174 INFO : Done parsing Skyline document.
17 Aug 2021 20:18:35,175 INFO : Creating and populating temp tables for Proportion values
17 Aug 2021 20:18:35,201 INFO : Setting PrecursorModifiedAreaProportion values on precursorchrominfo
17 Aug 2021 20:18:35,303 INFO : Setting ModifiedAreaProportion values on generalmoleculechrominfo
17 Aug 2021 20:18:35,343 INFO : Cleaning up temp tables
17 Aug 2021 20:18:35,546 INFO : Completed import of Skyline document from Proteomic analysis of 134 newborn samples.sky.zip
17 Aug 2021 20:18:35,549 INFO : 100% Done
17 Aug 2021 20:18:35,553 DEBUG: Finished trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/U%20of%20Masaryk%20RECETOX%20-%20Vidova%20et%20al.%20Sci%20Rep%202021%20Supplementary_673e4f17-e200-1039-a2b1-fea6ddf522ee/_temp__2021-08-17_20-17-03/export/xar/experiments_and_runs.xar.exploded/Run115407/Proteomic%20analysis%20of%20134%20newborn%20samples.sky.zip into the system
17 Aug 2021 20:18:35,553 DEBUG: Trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/U%20of%20Masaryk%20RECETOX%20-%20Vidova%20et%20al.%20Sci%20Rep%202021%20Supplementary_673e4f17-e200-1039-a2b1-fea6ddf522ee/_temp__2021-08-17_20-17-03/export/xar/experiments_and_runs.xar.exploded/Run115407/Proteomic%20analysis%20of%20134%20newborn%20samples/Proteomics%20analysis%20of%20134%20newborn%20samples.skyd into the system
17 Aug 2021 20:18:35,554 DEBUG: Finished trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/U%20of%20Masaryk%20RECETOX%20-%20Vidova%20et%20al.%20Sci%20Rep%202021%20Supplementary_673e4f17-e200-1039-a2b1-fea6ddf522ee/_temp__2021-08-17_20-17-03/export/xar/experiments_and_runs.xar.exploded/Run115407/Proteomic%20analysis%20of%20134%20newborn%20samples/Proteomics%20analysis%20of%20134%20newborn%20samples.skyd into the system
17 Aug 2021 20:18:35,554 DEBUG: Trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/U%20of%20Masaryk%20RECETOX%20-%20Vidova%20et%20al.%20Sci%20Rep%202021%20Supplementary_673e4f17-e200-1039-a2b1-fea6ddf522ee/_temp__2021-08-17_20-17-03/export/xar/experiments_and_runs.xar.exploded/Run115425/Calibration%20peptide%20ALNSIIDVYHK.sky.zip into the system
17 Aug 2021 20:18:35,555 INFO : Starting import from Calibration peptide ALNSIIDVYHK.sky.zip
17 Aug 2021 20:18:35,558 INFO : Starting to import Skyline document from Calibration peptide ALNSIIDVYHK.sky.zip
17 Aug 2021 20:18:35,560 INFO : Expanding Calibration peptide ALNSIIDVYHK.skyd
17 Aug 2021 20:18:35,636 INFO : Expanding Calibration peptide ALNSIIDVYHK.sky.view
17 Aug 2021 20:18:35,637 INFO : Expanding Calibration peptide ALNSIIDVYHK.sky
17 Aug 2021 20:18:35,644 INFO : 18% Done
17 Aug 2021 20:18:35,676 DEBUG: Starting to load chromatogram headers
17 Aug 2021 20:18:35,678 DEBUG: Done loading chromatogram headers
17 Aug 2021 20:18:35,728 INFO : Inserting P05109
17 Aug 2021 20:18:35,736 INFO : 98% Done
17 Aug 2021 20:18:35,804 DEBUG: Total peptides inserted: 1
17 Aug 2021 20:18:35,805 INFO : Done parsing Skyline document.
17 Aug 2021 20:18:35,806 INFO : Creating and populating temp tables for Proportion values
17 Aug 2021 20:18:35,815 INFO : Setting PrecursorModifiedAreaProportion values on precursorchrominfo
17 Aug 2021 20:18:35,817 INFO : Setting ModifiedAreaProportion values on generalmoleculechrominfo
17 Aug 2021 20:18:35,818 INFO : Cleaning up temp tables
17 Aug 2021 20:18:36,019 INFO : Completed import of Skyline document from Calibration peptide ALNSIIDVYHK.sky.zip
17 Aug 2021 20:18:36,022 INFO : 100% Done
17 Aug 2021 20:18:36,025 DEBUG: Finished trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/U%20of%20Masaryk%20RECETOX%20-%20Vidova%20et%20al.%20Sci%20Rep%202021%20Supplementary_673e4f17-e200-1039-a2b1-fea6ddf522ee/_temp__2021-08-17_20-17-03/export/xar/experiments_and_runs.xar.exploded/Run115425/Calibration%20peptide%20ALNSIIDVYHK.sky.zip into the system
17 Aug 2021 20:18:36,025 DEBUG: Trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/U%20of%20Masaryk%20RECETOX%20-%20Vidova%20et%20al.%20Sci%20Rep%202021%20Supplementary_673e4f17-e200-1039-a2b1-fea6ddf522ee/_temp__2021-08-17_20-17-03/export/xar/experiments_and_runs.xar.exploded/Run115425/Calibration%20peptide%20ALNSIIDVYHK/Calibration%20peptide%20ALNSIIDVYHK.skyd into the system
17 Aug 2021 20:18:36,026 DEBUG: Finished trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/U%20of%20Masaryk%20RECETOX%20-%20Vidova%20et%20al.%20Sci%20Rep%202021%20Supplementary_673e4f17-e200-1039-a2b1-fea6ddf522ee/_temp__2021-08-17_20-17-03/export/xar/experiments_and_runs.xar.exploded/Run115425/Calibration%20peptide%20ALNSIIDVYHK/Calibration%20peptide%20ALNSIIDVYHK.skyd into the system
17 Aug 2021 20:18:36,026 DEBUG: Trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/U%20of%20Masaryk%20RECETOX%20-%20Vidova%20et%20al.%20Sci%20Rep%202021%20Supplementary_673e4f17-e200-1039-a2b1-fea6ddf522ee/_temp__2021-08-17_20-17-03/export/xar/experiments_and_runs.xar.exploded/Run115429/Calibration%20peptide%20AVLTIDEK.sky.zip into the system
17 Aug 2021 20:18:36,027 INFO : Starting import from Calibration peptide AVLTIDEK.sky.zip
17 Aug 2021 20:18:36,029 INFO : Starting to import Skyline document from Calibration peptide AVLTIDEK.sky.zip
17 Aug 2021 20:18:36,032 INFO : Expanding Calibration peptide AVLTIDEK.skyd
17 Aug 2021 20:18:36,134 INFO : Expanding Calibration peptide AVLTIDEK.sky.view
17 Aug 2021 20:18:36,134 INFO : Expanding Calibration peptide AVLTIDEK.sky
17 Aug 2021 20:18:36,142 INFO : 13% Done
17 Aug 2021 20:18:36,195 DEBUG: Starting to load chromatogram headers
17 Aug 2021 20:18:36,197 DEBUG: Done loading chromatogram headers
17 Aug 2021 20:18:36,249 INFO : Inserting P01009
17 Aug 2021 20:18:36,260 INFO : 98% Done
17 Aug 2021 20:18:36,341 DEBUG: Total peptides inserted: 1
17 Aug 2021 20:18:36,342 INFO : Done parsing Skyline document.
17 Aug 2021 20:18:36,343 INFO : Creating and populating temp tables for Proportion values
17 Aug 2021 20:18:36,353 INFO : Setting PrecursorModifiedAreaProportion values on precursorchrominfo
17 Aug 2021 20:18:36,356 INFO : Setting ModifiedAreaProportion values on generalmoleculechrominfo
17 Aug 2021 20:18:36,357 INFO : Cleaning up temp tables
17 Aug 2021 20:18:36,558 INFO : Completed import of Skyline document from Calibration peptide AVLTIDEK.sky.zip
17 Aug 2021 20:18:36,561 INFO : 100% Done
17 Aug 2021 20:18:36,564 DEBUG: Finished trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/U%20of%20Masaryk%20RECETOX%20-%20Vidova%20et%20al.%20Sci%20Rep%202021%20Supplementary_673e4f17-e200-1039-a2b1-fea6ddf522ee/_temp__2021-08-17_20-17-03/export/xar/experiments_and_runs.xar.exploded/Run115429/Calibration%20peptide%20AVLTIDEK.sky.zip into the system
17 Aug 2021 20:18:36,565 DEBUG: Trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/U%20of%20Masaryk%20RECETOX%20-%20Vidova%20et%20al.%20Sci%20Rep%202021%20Supplementary_673e4f17-e200-1039-a2b1-fea6ddf522ee/_temp__2021-08-17_20-17-03/export/xar/experiments_and_runs.xar.exploded/Run115429/Calibration%20peptide%20AVLTIDEK/Calibration%20peptide%20AVLTIDEK.skyd into the system
17 Aug 2021 20:18:36,565 DEBUG: Finished trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/U%20of%20Masaryk%20RECETOX%20-%20Vidova%20et%20al.%20Sci%20Rep%202021%20Supplementary_673e4f17-e200-1039-a2b1-fea6ddf522ee/_temp__2021-08-17_20-17-03/export/xar/experiments_and_runs.xar.exploded/Run115429/Calibration%20peptide%20AVLTIDEK/Calibration%20peptide%20AVLTIDEK.skyd into the system
17 Aug 2021 20:18:36,565 DEBUG: Trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/U%20of%20Masaryk%20RECETOX%20-%20Vidova%20et%20al.%20Sci%20Rep%202021%20Supplementary_673e4f17-e200-1039-a2b1-fea6ddf522ee/_temp__2021-08-17_20-17-03/export/xar/experiments_and_runs.xar.exploded/Run115445/Calibration%20peptide%20DASGATFTWTPSSGK.sky.zip into the system
17 Aug 2021 20:18:36,567 INFO : Starting import from Calibration peptide DASGATFTWTPSSGK.sky.zip
17 Aug 2021 20:18:36,569 INFO : Starting to import Skyline document from Calibration peptide DASGATFTWTPSSGK.sky.zip
17 Aug 2021 20:18:36,572 INFO : Expanding Calibration peptide DASGATFTWTPSSGK.skyd
17 Aug 2021 20:18:36,661 INFO : Expanding Calibration peptide DASGATFTWTPSSGK.sky.view
17 Aug 2021 20:18:36,661 INFO : Expanding Calibration peptide DASGATFTWTPSSGK.sky
17 Aug 2021 20:18:36,669 INFO : 15% Done
17 Aug 2021 20:18:36,713 DEBUG: Starting to load chromatogram headers
17 Aug 2021 20:18:36,714 DEBUG: Done loading chromatogram headers
17 Aug 2021 20:18:36,758 INFO : Inserting P01877
17 Aug 2021 20:18:36,765 INFO : 98% Done
17 Aug 2021 20:18:36,830 DEBUG: Total peptides inserted: 1
17 Aug 2021 20:18:36,831 INFO : Done parsing Skyline document.
17 Aug 2021 20:18:36,831 INFO : Creating and populating temp tables for Proportion values
17 Aug 2021 20:18:36,840 INFO : Setting PrecursorModifiedAreaProportion values on precursorchrominfo
17 Aug 2021 20:18:36,843 INFO : Setting ModifiedAreaProportion values on generalmoleculechrominfo
17 Aug 2021 20:18:36,844 INFO : Cleaning up temp tables
17 Aug 2021 20:18:37,040 INFO : Completed import of Skyline document from Calibration peptide DASGATFTWTPSSGK.sky.zip
17 Aug 2021 20:18:37,043 INFO : 100% Done
17 Aug 2021 20:18:37,047 DEBUG: Finished trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/U%20of%20Masaryk%20RECETOX%20-%20Vidova%20et%20al.%20Sci%20Rep%202021%20Supplementary_673e4f17-e200-1039-a2b1-fea6ddf522ee/_temp__2021-08-17_20-17-03/export/xar/experiments_and_runs.xar.exploded/Run115445/Calibration%20peptide%20DASGATFTWTPSSGK.sky.zip into the system
17 Aug 2021 20:18:37,047 DEBUG: Trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/U%20of%20Masaryk%20RECETOX%20-%20Vidova%20et%20al.%20Sci%20Rep%202021%20Supplementary_673e4f17-e200-1039-a2b1-fea6ddf522ee/_temp__2021-08-17_20-17-03/export/xar/experiments_and_runs.xar.exploded/Run115445/Calibration%20peptide%20DASGATFTWTPSSGK/Calibration%20peptide%20DASGATFTWTPSSGK.skyd into the system
17 Aug 2021 20:18:37,047 DEBUG: Finished trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/U%20of%20Masaryk%20RECETOX%20-%20Vidova%20et%20al.%20Sci%20Rep%202021%20Supplementary_673e4f17-e200-1039-a2b1-fea6ddf522ee/_temp__2021-08-17_20-17-03/export/xar/experiments_and_runs.xar.exploded/Run115445/Calibration%20peptide%20DASGATFTWTPSSGK/Calibration%20peptide%20DASGATFTWTPSSGK.skyd into the system
17 Aug 2021 20:18:37,047 DEBUG: Trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/U%20of%20Masaryk%20RECETOX%20-%20Vidova%20et%20al.%20Sci%20Rep%202021%20Supplementary_673e4f17-e200-1039-a2b1-fea6ddf522ee/_temp__2021-08-17_20-17-03/export/xar/experiments_and_runs.xar.exploded/Run115448/Calibration%20peptide%20DLQNFLK.sky.zip into the system
17 Aug 2021 20:18:37,049 INFO : Starting import from Calibration peptide DLQNFLK.sky.zip
17 Aug 2021 20:18:37,051 INFO : Starting to import Skyline document from Calibration peptide DLQNFLK.sky.zip
17 Aug 2021 20:18:37,054 INFO : Expanding Calibration peptide DLQNFLK.skyd
17 Aug 2021 20:18:37,153 INFO : Expanding Calibration peptide DLQNFLK.sky.view
17 Aug 2021 20:18:37,153 INFO : Expanding Calibration peptide DLQNFLK.sky
17 Aug 2021 20:18:37,160 INFO : 16% Done
17 Aug 2021 20:18:37,209 DEBUG: Starting to load chromatogram headers
17 Aug 2021 20:18:37,210 DEBUG: Done loading chromatogram headers
17 Aug 2021 20:18:37,255 INFO : Inserting P06702
17 Aug 2021 20:18:37,263 INFO : 98% Done
17 Aug 2021 20:18:37,333 DEBUG: Total peptides inserted: 1
17 Aug 2021 20:18:37,334 INFO : Done parsing Skyline document.
17 Aug 2021 20:18:37,335 INFO : Creating and populating temp tables for Proportion values
17 Aug 2021 20:18:37,344 INFO : Setting PrecursorModifiedAreaProportion values on precursorchrominfo
17 Aug 2021 20:18:37,346 INFO : Setting ModifiedAreaProportion values on generalmoleculechrominfo
17 Aug 2021 20:18:37,348 INFO : Cleaning up temp tables
17 Aug 2021 20:18:37,562 INFO : Completed import of Skyline document from Calibration peptide DLQNFLK.sky.zip
17 Aug 2021 20:18:37,565 INFO : 100% Done
17 Aug 2021 20:18:37,568 DEBUG: Finished trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/U%20of%20Masaryk%20RECETOX%20-%20Vidova%20et%20al.%20Sci%20Rep%202021%20Supplementary_673e4f17-e200-1039-a2b1-fea6ddf522ee/_temp__2021-08-17_20-17-03/export/xar/experiments_and_runs.xar.exploded/Run115448/Calibration%20peptide%20DLQNFLK.sky.zip into the system
17 Aug 2021 20:18:37,568 DEBUG: Trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/U%20of%20Masaryk%20RECETOX%20-%20Vidova%20et%20al.%20Sci%20Rep%202021%20Supplementary_673e4f17-e200-1039-a2b1-fea6ddf522ee/_temp__2021-08-17_20-17-03/export/xar/experiments_and_runs.xar.exploded/Run115448/Calibration%20peptide%20DLQNFLK/Calibration%20peptide%20DLQNFLK.skyd into the system
17 Aug 2021 20:18:37,568 DEBUG: Finished trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/U%20of%20Masaryk%20RECETOX%20-%20Vidova%20et%20al.%20Sci%20Rep%202021%20Supplementary_673e4f17-e200-1039-a2b1-fea6ddf522ee/_temp__2021-08-17_20-17-03/export/xar/experiments_and_runs.xar.exploded/Run115448/Calibration%20peptide%20DLQNFLK/Calibration%20peptide%20DLQNFLK.skyd into the system
17 Aug 2021 20:18:37,568 DEBUG: Trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/U%20of%20Masaryk%20RECETOX%20-%20Vidova%20et%20al.%20Sci%20Rep%202021%20Supplementary_673e4f17-e200-1039-a2b1-fea6ddf522ee/_temp__2021-08-17_20-17-03/export/xar/experiments_and_runs.xar.exploded/Run115476/Calibration,%20peptide%20DPPQYPVVPVHLDR/Calibration%20peptide%20DPPQYPVVPVHLDR.skyd into the system
17 Aug 2021 20:18:37,569 DEBUG: Finished trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/U%20of%20Masaryk%20RECETOX%20-%20Vidova%20et%20al.%20Sci%20Rep%202021%20Supplementary_673e4f17-e200-1039-a2b1-fea6ddf522ee/_temp__2021-08-17_20-17-03/export/xar/experiments_and_runs.xar.exploded/Run115476/Calibration,%20peptide%20DPPQYPVVPVHLDR/Calibration%20peptide%20DPPQYPVVPVHLDR.skyd into the system
17 Aug 2021 20:18:37,569 DEBUG: Trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/U%20of%20Masaryk%20RECETOX%20-%20Vidova%20et%20al.%20Sci%20Rep%202021%20Supplementary_673e4f17-e200-1039-a2b1-fea6ddf522ee/_temp__2021-08-17_20-17-03/export/xar/experiments_and_runs.xar.exploded/Run115476/Calibration,%20peptide%20DPPQYPVVPVHLDR.sky.zip into the system
17 Aug 2021 20:18:37,570 INFO : Starting import from Calibration, peptide DPPQYPVVPVHLDR.sky.zip
17 Aug 2021 20:18:37,572 INFO : Starting to import Skyline document from Calibration, peptide DPPQYPVVPVHLDR.sky.zip
17 Aug 2021 20:18:37,574 INFO : Expanding Calibration peptide DPPQYPVVPVHLDR.skyd
17 Aug 2021 20:18:37,658 INFO : Expanding Calibration peptide DPPQYPVVPVHLDR.sky.view
17 Aug 2021 20:18:37,658 INFO : Expanding Calibration peptide DPPQYPVVPVHLDR.sky
17 Aug 2021 20:18:37,664 INFO : 16% Done
17 Aug 2021 20:18:37,708 DEBUG: Starting to load chromatogram headers
17 Aug 2021 20:18:37,709 DEBUG: Done loading chromatogram headers
17 Aug 2021 20:18:37,754 INFO : Inserting P10153
17 Aug 2021 20:18:37,762 INFO : 98% Done
17 Aug 2021 20:18:37,823 DEBUG: Total peptides inserted: 1
17 Aug 2021 20:18:37,824 INFO : Done parsing Skyline document.
17 Aug 2021 20:18:37,825 INFO : Creating and populating temp tables for Proportion values
17 Aug 2021 20:18:37,834 INFO : Setting PrecursorModifiedAreaProportion values on precursorchrominfo
17 Aug 2021 20:18:37,836 INFO : Setting ModifiedAreaProportion values on generalmoleculechrominfo
17 Aug 2021 20:18:37,838 INFO : Cleaning up temp tables
17 Aug 2021 20:18:38,034 INFO : Completed import of Skyline document from Calibration, peptide DPPQYPVVPVHLDR.sky.zip
17 Aug 2021 20:18:38,036 INFO : 100% Done
17 Aug 2021 20:18:38,040 DEBUG: Finished trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/U%20of%20Masaryk%20RECETOX%20-%20Vidova%20et%20al.%20Sci%20Rep%202021%20Supplementary_673e4f17-e200-1039-a2b1-fea6ddf522ee/_temp__2021-08-17_20-17-03/export/xar/experiments_and_runs.xar.exploded/Run115476/Calibration,%20peptide%20DPPQYPVVPVHLDR.sky.zip into the system
17 Aug 2021 20:18:38,040 DEBUG: Trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/U%20of%20Masaryk%20RECETOX%20-%20Vidova%20et%20al.%20Sci%20Rep%202021%20Supplementary_673e4f17-e200-1039-a2b1-fea6ddf522ee/_temp__2021-08-17_20-17-03/export/xar/experiments_and_runs.xar.exploded/Run115477/Calibration%20peptide%20NQNTFLR.sky.zip into the system
17 Aug 2021 20:18:38,041 INFO : Starting import from Calibration peptide NQNTFLR.sky.zip
17 Aug 2021 20:18:38,043 INFO : Starting to import Skyline document from Calibration peptide NQNTFLR.sky.zip
17 Aug 2021 20:18:38,048 INFO : Expanding Calibration peptide NQNTFLR.skyd
17 Aug 2021 20:18:38,196 INFO : Expanding Calibration peptide NQNTFLR.sky.view
17 Aug 2021 20:18:38,196 INFO : Expanding Calibration peptide NQNTFLR.sky
17 Aug 2021 20:18:38,203 INFO : 17% Done
17 Aug 2021 20:18:38,253 DEBUG: Starting to load chromatogram headers
17 Aug 2021 20:18:38,255 DEBUG: Done loading chromatogram headers
17 Aug 2021 20:18:38,299 INFO : Inserting P12724
17 Aug 2021 20:18:38,305 INFO : 98% Done
17 Aug 2021 20:18:38,365 DEBUG: Total peptides inserted: 1
17 Aug 2021 20:18:38,366 INFO : Done parsing Skyline document.
17 Aug 2021 20:18:38,367 INFO : Creating and populating temp tables for Proportion values
17 Aug 2021 20:18:38,375 INFO : Setting PrecursorModifiedAreaProportion values on precursorchrominfo
17 Aug 2021 20:18:38,378 INFO : Setting ModifiedAreaProportion values on generalmoleculechrominfo
17 Aug 2021 20:18:38,379 INFO : Cleaning up temp tables
17 Aug 2021 20:18:38,581 INFO : Completed import of Skyline document from Calibration peptide NQNTFLR.sky.zip
17 Aug 2021 20:18:38,583 INFO : 100% Done
17 Aug 2021 20:18:38,586 DEBUG: Finished trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/U%20of%20Masaryk%20RECETOX%20-%20Vidova%20et%20al.%20Sci%20Rep%202021%20Supplementary_673e4f17-e200-1039-a2b1-fea6ddf522ee/_temp__2021-08-17_20-17-03/export/xar/experiments_and_runs.xar.exploded/Run115477/Calibration%20peptide%20NQNTFLR.sky.zip into the system
17 Aug 2021 20:18:38,587 DEBUG: Trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/U%20of%20Masaryk%20RECETOX%20-%20Vidova%20et%20al.%20Sci%20Rep%202021%20Supplementary_673e4f17-e200-1039-a2b1-fea6ddf522ee/_temp__2021-08-17_20-17-03/export/xar/experiments_and_runs.xar.exploded/Run115477/Calibration%20peptide%20NQNTFLR/Calibration%20peptide%20NQNTFLR.skyd into the system
17 Aug 2021 20:18:38,587 DEBUG: Finished trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/U%20of%20Masaryk%20RECETOX%20-%20Vidova%20et%20al.%20Sci%20Rep%202021%20Supplementary_673e4f17-e200-1039-a2b1-fea6ddf522ee/_temp__2021-08-17_20-17-03/export/xar/experiments_and_runs.xar.exploded/Run115477/Calibration%20peptide%20NQNTFLR/Calibration%20peptide%20NQNTFLR.skyd into the system
17 Aug 2021 20:18:38,587 DEBUG: Trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/U%20of%20Masaryk%20RECETOX%20-%20Vidova%20et%20al.%20Sci%20Rep%202021%20Supplementary_673e4f17-e200-1039-a2b1-fea6ddf522ee/_temp__2021-08-17_20-17-03/export/xar/experiments_and_runs.xar.exploded/Run115479/Calibration%20peptide%20LGHPDTLNQGEFK.sky.zip into the system
17 Aug 2021 20:18:38,588 INFO : Starting import from Calibration peptide LGHPDTLNQGEFK.sky.zip
17 Aug 2021 20:18:38,590 INFO : Starting to import Skyline document from Calibration peptide LGHPDTLNQGEFK.sky.zip
17 Aug 2021 20:18:38,593 INFO : Expanding Calibration peptide LGHPDTLNQGEFK.skyd
17 Aug 2021 20:18:38,673 INFO : Expanding Calibration peptide LGHPDTLNQGEFK.sky.view
17 Aug 2021 20:18:38,673 INFO : Expanding Calibration peptide LGHPDTLNQGEFK.sky
17 Aug 2021 20:18:38,680 INFO : 20% Done
17 Aug 2021 20:18:38,718 DEBUG: Starting to load chromatogram headers
17 Aug 2021 20:18:38,719 DEBUG: Done loading chromatogram headers
17 Aug 2021 20:18:38,759 INFO : Inserting P06702
17 Aug 2021 20:18:38,766 INFO : 98% Done
17 Aug 2021 20:18:38,816 DEBUG: Total peptides inserted: 1
17 Aug 2021 20:18:38,816 INFO : Done parsing Skyline document.
17 Aug 2021 20:18:38,817 INFO : Creating and populating temp tables for Proportion values
17 Aug 2021 20:18:38,826 INFO : Setting PrecursorModifiedAreaProportion values on precursorchrominfo
17 Aug 2021 20:18:38,828 INFO : Setting ModifiedAreaProportion values on generalmoleculechrominfo
17 Aug 2021 20:18:38,829 INFO : Cleaning up temp tables
17 Aug 2021 20:18:39,033 INFO : Completed import of Skyline document from Calibration peptide LGHPDTLNQGEFK.sky.zip
17 Aug 2021 20:18:39,037 INFO : 100% Done
17 Aug 2021 20:18:39,040 DEBUG: Finished trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/U%20of%20Masaryk%20RECETOX%20-%20Vidova%20et%20al.%20Sci%20Rep%202021%20Supplementary_673e4f17-e200-1039-a2b1-fea6ddf522ee/_temp__2021-08-17_20-17-03/export/xar/experiments_and_runs.xar.exploded/Run115479/Calibration%20peptide%20LGHPDTLNQGEFK.sky.zip into the system
17 Aug 2021 20:18:39,040 DEBUG: Trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/U%20of%20Masaryk%20RECETOX%20-%20Vidova%20et%20al.%20Sci%20Rep%202021%20Supplementary_673e4f17-e200-1039-a2b1-fea6ddf522ee/_temp__2021-08-17_20-17-03/export/xar/experiments_and_runs.xar.exploded/Run115479/Calibration%20peptide%20LGHPDTLNQGEFK/Calibration%20peptide%20LGHPDTLNQGEFK.skyd into the system
17 Aug 2021 20:18:39,040 DEBUG: Finished trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/U%20of%20Masaryk%20RECETOX%20-%20Vidova%20et%20al.%20Sci%20Rep%202021%20Supplementary_673e4f17-e200-1039-a2b1-fea6ddf522ee/_temp__2021-08-17_20-17-03/export/xar/experiments_and_runs.xar.exploded/Run115479/Calibration%20peptide%20LGHPDTLNQGEFK/Calibration%20peptide%20LGHPDTLNQGEFK.skyd into the system
17 Aug 2021 20:18:39,040 DEBUG: Trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/U%20of%20Masaryk%20RECETOX%20-%20Vidova%20et%20al.%20Sci%20Rep%202021%20Supplementary_673e4f17-e200-1039-a2b1-fea6ddf522ee/_temp__2021-08-17_20-17-03/export/xar/experiments_and_runs.xar.exploded/Run115480/Calibration%20peptide%20VVLEGGIDPILR.sky.zip into the system
17 Aug 2021 20:18:39,042 INFO : Starting import from Calibration peptide VVLEGGIDPILR.sky.zip
17 Aug 2021 20:18:39,044 INFO : Starting to import Skyline document from Calibration peptide VVLEGGIDPILR.sky.zip
17 Aug 2021 20:18:39,047 INFO : Expanding Calibration peptide VVLEGGIDPILR.skyd
17 Aug 2021 20:18:39,142 INFO : Expanding Calibration peptide VVLEGGIDPILR.sky.view
17 Aug 2021 20:18:39,143 INFO : Expanding Calibration peptide VVLEGGIDPILR.sky
17 Aug 2021 20:18:39,149 INFO : 22% Done
17 Aug 2021 20:18:39,191 DEBUG: Starting to load chromatogram headers
17 Aug 2021 20:18:39,192 DEBUG: Done loading chromatogram headers
17 Aug 2021 20:18:39,243 INFO : Inserting P05164
17 Aug 2021 20:18:39,250 INFO : 98% Done
17 Aug 2021 20:18:39,306 DEBUG: Total peptides inserted: 1
17 Aug 2021 20:18:39,306 INFO : Done parsing Skyline document.
17 Aug 2021 20:18:39,307 INFO : Creating and populating temp tables for Proportion values
17 Aug 2021 20:18:39,317 INFO : Setting PrecursorModifiedAreaProportion values on precursorchrominfo
17 Aug 2021 20:18:39,320 INFO : Setting ModifiedAreaProportion values on generalmoleculechrominfo
17 Aug 2021 20:18:39,321 INFO : Cleaning up temp tables
17 Aug 2021 20:18:39,517 INFO : Completed import of Skyline document from Calibration peptide VVLEGGIDPILR.sky.zip
17 Aug 2021 20:18:39,521 INFO : 100% Done
17 Aug 2021 20:18:39,525 DEBUG: Finished trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/U%20of%20Masaryk%20RECETOX%20-%20Vidova%20et%20al.%20Sci%20Rep%202021%20Supplementary_673e4f17-e200-1039-a2b1-fea6ddf522ee/_temp__2021-08-17_20-17-03/export/xar/experiments_and_runs.xar.exploded/Run115480/Calibration%20peptide%20VVLEGGIDPILR.sky.zip into the system
17 Aug 2021 20:18:39,525 DEBUG: Trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/U%20of%20Masaryk%20RECETOX%20-%20Vidova%20et%20al.%20Sci%20Rep%202021%20Supplementary_673e4f17-e200-1039-a2b1-fea6ddf522ee/_temp__2021-08-17_20-17-03/export/xar/experiments_and_runs.xar.exploded/Run115480/Calibration%20peptide%20VVLEGGIDPILR/Calibration%20peptide%20VVLEGGIDPILR.skyd into the system
17 Aug 2021 20:18:39,525 DEBUG: Finished trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/U%20of%20Masaryk%20RECETOX%20-%20Vidova%20et%20al.%20Sci%20Rep%202021%20Supplementary_673e4f17-e200-1039-a2b1-fea6ddf522ee/_temp__2021-08-17_20-17-03/export/xar/experiments_and_runs.xar.exploded/Run115480/Calibration%20peptide%20VVLEGGIDPILR/Calibration%20peptide%20VVLEGGIDPILR.skyd into the system
17 Aug 2021 20:18:39,525 DEBUG: Trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/U%20of%20Masaryk%20RECETOX%20-%20Vidova%20et%20al.%20Sci%20Rep%202021%20Supplementary_673e4f17-e200-1039-a2b1-fea6ddf522ee/_temp__2021-08-17_20-17-03/export/xar/experiments_and_runs.xar.exploded/Run115483/Calibration,%20peptide%20SAVQGPPER/Calibration%20peptide%20SAVQGPPER.skyd into the system
17 Aug 2021 20:18:39,526 DEBUG: Finished trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/U%20of%20Masaryk%20RECETOX%20-%20Vidova%20et%20al.%20Sci%20Rep%202021%20Supplementary_673e4f17-e200-1039-a2b1-fea6ddf522ee/_temp__2021-08-17_20-17-03/export/xar/experiments_and_runs.xar.exploded/Run115483/Calibration,%20peptide%20SAVQGPPER/Calibration%20peptide%20SAVQGPPER.skyd into the system
17 Aug 2021 20:18:39,526 DEBUG: Trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/U%20of%20Masaryk%20RECETOX%20-%20Vidova%20et%20al.%20Sci%20Rep%202021%20Supplementary_673e4f17-e200-1039-a2b1-fea6ddf522ee/_temp__2021-08-17_20-17-03/export/xar/experiments_and_runs.xar.exploded/Run115483/Calibration,%20peptide%20SAVQGPPER.sky.zip into the system
17 Aug 2021 20:18:39,527 INFO : Starting import from Calibration, peptide SAVQGPPER.sky.zip
17 Aug 2021 20:18:39,529 INFO : Starting to import Skyline document from Calibration, peptide SAVQGPPER.sky.zip
17 Aug 2021 20:18:39,534 INFO : Expanding Calibration peptide SAVQGPPER.skyd
17 Aug 2021 20:18:39,713 INFO : Expanding Calibration peptide SAVQGPPER.sky.view
17 Aug 2021 20:18:39,713 INFO : Expanding Calibration peptide SAVQGPPER.sky
17 Aug 2021 20:18:39,721 INFO : 13% Done
17 Aug 2021 20:18:39,811 DEBUG: Starting to load chromatogram headers
17 Aug 2021 20:18:39,814 DEBUG: Done loading chromatogram headers
17 Aug 2021 20:18:39,881 INFO : Inserting P01876+P01877
17 Aug 2021 20:18:39,896 INFO : 98% Done
17 Aug 2021 20:18:40,055 DEBUG: Total peptides inserted: 1
17 Aug 2021 20:18:40,056 INFO : Done parsing Skyline document.
17 Aug 2021 20:18:40,057 INFO : Creating and populating temp tables for Proportion values
17 Aug 2021 20:18:40,067 INFO : Setting PrecursorModifiedAreaProportion values on precursorchrominfo
17 Aug 2021 20:18:40,072 INFO : Setting ModifiedAreaProportion values on generalmoleculechrominfo
17 Aug 2021 20:18:40,074 INFO : Cleaning up temp tables
17 Aug 2021 20:18:40,271 INFO : Completed import of Skyline document from Calibration, peptide SAVQGPPER.sky.zip
17 Aug 2021 20:18:40,274 INFO : 100% Done
17 Aug 2021 20:18:40,279 DEBUG: Finished trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/U%20of%20Masaryk%20RECETOX%20-%20Vidova%20et%20al.%20Sci%20Rep%202021%20Supplementary_673e4f17-e200-1039-a2b1-fea6ddf522ee/_temp__2021-08-17_20-17-03/export/xar/experiments_and_runs.xar.exploded/Run115483/Calibration,%20peptide%20SAVQGPPER.sky.zip into the system
17 Aug 2021 20:18:40,279 DEBUG: Trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/U%20of%20Masaryk%20RECETOX%20-%20Vidova%20et%20al.%20Sci%20Rep%202021%20Supplementary_673e4f17-e200-1039-a2b1-fea6ddf522ee/_temp__2021-08-17_20-17-03/export/xar/experiments_and_runs.xar.exploded/Run115484/Calibration%20peptide%20TPLTATLSK.sky.zip into the system
17 Aug 2021 20:18:40,281 INFO : Starting import from Calibration peptide TPLTATLSK.sky.zip
17 Aug 2021 20:18:40,283 INFO : Starting to import Skyline document from Calibration peptide TPLTATLSK.sky.zip
17 Aug 2021 20:18:40,287 INFO : Expanding Calibration peptide TPLTATLSK.skyd
17 Aug 2021 20:18:40,402 INFO : Expanding Calibration peptide TPLTATLSK.sky.view
17 Aug 2021 20:18:40,403 INFO : Expanding Calibration peptide TPLTATLSK.sky
17 Aug 2021 20:18:40,411 INFO : 14% Done
17 Aug 2021 20:18:40,467 DEBUG: Starting to load chromatogram headers
17 Aug 2021 20:18:40,469 DEBUG: Done loading chromatogram headers
17 Aug 2021 20:18:40,522 INFO : Inserting P01876
17 Aug 2021 20:18:40,532 INFO : 98% Done
17 Aug 2021 20:18:40,615 DEBUG: Total peptides inserted: 1
17 Aug 2021 20:18:40,616 INFO : Done parsing Skyline document.
17 Aug 2021 20:18:40,617 INFO : Creating and populating temp tables for Proportion values
17 Aug 2021 20:18:40,626 INFO : Setting PrecursorModifiedAreaProportion values on precursorchrominfo
17 Aug 2021 20:18:40,629 INFO : Setting ModifiedAreaProportion values on generalmoleculechrominfo
17 Aug 2021 20:18:40,631 INFO : Cleaning up temp tables
17 Aug 2021 20:18:40,824 INFO : Completed import of Skyline document from Calibration peptide TPLTATLSK.sky.zip
17 Aug 2021 20:18:40,826 INFO : 100% Done
17 Aug 2021 20:18:40,830 DEBUG: Finished trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/U%20of%20Masaryk%20RECETOX%20-%20Vidova%20et%20al.%20Sci%20Rep%202021%20Supplementary_673e4f17-e200-1039-a2b1-fea6ddf522ee/_temp__2021-08-17_20-17-03/export/xar/experiments_and_runs.xar.exploded/Run115484/Calibration%20peptide%20TPLTATLSK.sky.zip into the system
17 Aug 2021 20:18:40,830 DEBUG: Trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/U%20of%20Masaryk%20RECETOX%20-%20Vidova%20et%20al.%20Sci%20Rep%202021%20Supplementary_673e4f17-e200-1039-a2b1-fea6ddf522ee/_temp__2021-08-17_20-17-03/export/xar/experiments_and_runs.xar.exploded/Run115484/Calibration%20peptide%20TPLTATLSK/Calibration%20peptide%20TPLTATLSK.skyd into the system
17 Aug 2021 20:18:40,830 DEBUG: Finished trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/U%20of%20Masaryk%20RECETOX%20-%20Vidova%20et%20al.%20Sci%20Rep%202021%20Supplementary_673e4f17-e200-1039-a2b1-fea6ddf522ee/_temp__2021-08-17_20-17-03/export/xar/experiments_and_runs.xar.exploded/Run115484/Calibration%20peptide%20TPLTATLSK/Calibration%20peptide%20TPLTATLSK.skyd into the system
17 Aug 2021 20:18:40,878 INFO : Done importing xar
17 Aug 2021 20:18:40,881 INFO : Loading pages and webpart properties
17 Aug 2021 20:18:40,951 INFO : Done importing pages and webpart properties
17 Aug 2021 20:18:40,952 INFO :
17 Aug 2021 20:18:40,952 INFO : Experiment import completed successfully.
17 Aug 2021 20:18:40,952 INFO : Successfully completed task 'org.labkey.panoramapublic.pipeline.ExperimentImportTask'
17 Aug 2021 20:18:40,998 INFO : Starting to run task 'org.labkey.panoramapublic.pipeline.CopyExperimentFinalTask' at location 'webserver-high-priority'
17 Aug 2021 20:18:40,998 INFO :
17 Aug 2021 20:18:40,998 INFO : Finishing up experiment copy.
17 Aug 2021 20:18:41,000 INFO : Creating a new TargetedMS experiment entry in panoramapublic.ExperimentAnnotations.
17 Aug 2021 20:18:41,004 INFO : Assigning a ProteomeXchange ID.
17 Aug 2021 20:18:41,369 INFO : Assigning a DOI.
17 Aug 2021 20:18:42,320 INFO : Assigned DOI: 10.6069/jwjg-sb14
17 Aug 2021 20:18:42,329 INFO : Updating access URL to point to the new copy of the data.
17 Aug 2021 20:18:42,337 INFO : Setting the 'copied' timestamp and journalExperimentId on the JournalExperiment table.
17 Aug 2021 20:18:42,338 INFO : Removing copy permissions given to journal.
17 Aug 2021 20:18:42,348 INFO : Adding read permissions to all users that are folder admins in the source container.
17 Aug 2021 20:18:42,357 INFO : Setting the TargetedMS folder type to 'Experimental Data'
17 Aug 2021 20:18:42,362 INFO : Updating the 'Raw Data' tab configuration
17 Aug 2021 20:18:42,368 INFO : Updating dataFileUrls for run Matrix effect on protein quantification.sky.zip; targetedms run ID 118305
17 Aug 2021 20:18:42,368 INFO : Updating dataFileUrl...
17 Aug 2021 20:18:42,368 INFO : from: file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/U%20of%20Masaryk%20RECETOX%20-%20Vidova%20et%20al.%20Sci%20Rep%202021%20Supplementary_673e4f17-e200-1039-a2b1-fea6ddf522ee/_temp__2021-08-17_20-17-03/export/xar/experiments_and_runs.xar.exploded/Run115194/Matrix%20effect%20on%20protein%20quantification.sky.zip
17 Aug 2021 20:18:42,369 INFO : to: file:///data/labkey/files/Panorama%20Public/2021/U%20of%20Masaryk%20RECETOX%20-%20Vidova%20et%20al.%20Sci%20Rep%202021%20Supplementary/@files/Matrix%20effect%20on%20protein%20quantification.sky.zip
17 Aug 2021 20:18:42,373 INFO : Updating dataFileUrl...
17 Aug 2021 20:18:42,374 INFO : from: file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/U%20of%20Masaryk%20RECETOX%20-%20Vidova%20et%20al.%20Sci%20Rep%202021%20Supplementary_673e4f17-e200-1039-a2b1-fea6ddf522ee/_temp__2021-08-17_20-17-03/export/xar/experiments_and_runs.xar.exploded/Run115194/Matrix%20effect%20on%20protein%20quantification/Matrix%20effect%20on%20protein%20quantification.skyd
17 Aug 2021 20:18:42,374 INFO : to: file:///data/labkey/files/Panorama%20Public/2021/U%20of%20Masaryk%20RECETOX%20-%20Vidova%20et%20al.%20Sci%20Rep%202021%20Supplementary/@files/Matrix%20effect%20on%20protein%20quantification/Matrix%20effect%20on%20protein%20quantification.skyd
17 Aug 2021 20:18:42,379 INFO : Updating dataFileUrls for run Trypsin digestion time lapse.sky.zip; targetedms run ID 118306
17 Aug 2021 20:18:42,379 INFO : Updating dataFileUrl...
17 Aug 2021 20:18:42,379 INFO : from: file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/U%20of%20Masaryk%20RECETOX%20-%20Vidova%20et%20al.%20Sci%20Rep%202021%20Supplementary_673e4f17-e200-1039-a2b1-fea6ddf522ee/_temp__2021-08-17_20-17-03/export/xar/experiments_and_runs.xar.exploded/Run115403/Trypsin%20digestion%20time%20lapse/Trypsin%20digestion%20time%20lapse.skyd
17 Aug 2021 20:18:42,379 INFO : to: file:///data/labkey/files/Panorama%20Public/2021/U%20of%20Masaryk%20RECETOX%20-%20Vidova%20et%20al.%20Sci%20Rep%202021%20Supplementary/@files/Trypsin%20digestion%20time%20lapse/Trypsin%20digestion%20time%20lapse.skyd
17 Aug 2021 20:18:42,381 INFO : Updating dataFileUrl...
17 Aug 2021 20:18:42,381 INFO : from: file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/U%20of%20Masaryk%20RECETOX%20-%20Vidova%20et%20al.%20Sci%20Rep%202021%20Supplementary_673e4f17-e200-1039-a2b1-fea6ddf522ee/_temp__2021-08-17_20-17-03/export/xar/experiments_and_runs.xar.exploded/Run115403/Trypsin%20digestion%20time%20lapse.sky.zip
17 Aug 2021 20:18:42,381 INFO : to: file:///data/labkey/files/Panorama%20Public/2021/U%20of%20Masaryk%20RECETOX%20-%20Vidova%20et%20al.%20Sci%20Rep%202021%20Supplementary/@files/Trypsin%20digestion%20time%20lapse.sky.zip
17 Aug 2021 20:18:42,385 INFO : Updating dataFileUrls for run Proteomic analysis of 134 newborn samples.sky.zip; targetedms run ID 118307
17 Aug 2021 20:18:42,386 INFO : Updating dataFileUrl...
17 Aug 2021 20:18:42,386 INFO : from: file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/U%20of%20Masaryk%20RECETOX%20-%20Vidova%20et%20al.%20Sci%20Rep%202021%20Supplementary_673e4f17-e200-1039-a2b1-fea6ddf522ee/_temp__2021-08-17_20-17-03/export/xar/experiments_and_runs.xar.exploded/Run115407/Proteomic%20analysis%20of%20134%20newborn%20samples.sky.zip
17 Aug 2021 20:18:42,386 INFO : to: file:///data/labkey/files/Panorama%20Public/2021/U%20of%20Masaryk%20RECETOX%20-%20Vidova%20et%20al.%20Sci%20Rep%202021%20Supplementary/@files/Proteomic%20analysis%20of%20134%20newborn%20samples.sky.zip
17 Aug 2021 20:18:42,388 INFO : Updating dataFileUrl...
17 Aug 2021 20:18:42,388 INFO : from: file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/U%20of%20Masaryk%20RECETOX%20-%20Vidova%20et%20al.%20Sci%20Rep%202021%20Supplementary_673e4f17-e200-1039-a2b1-fea6ddf522ee/_temp__2021-08-17_20-17-03/export/xar/experiments_and_runs.xar.exploded/Run115407/Proteomic%20analysis%20of%20134%20newborn%20samples/Proteomics%20analysis%20of%20134%20newborn%20samples.skyd
17 Aug 2021 20:18:42,388 INFO : to: file:///data/labkey/files/Panorama%20Public/2021/U%20of%20Masaryk%20RECETOX%20-%20Vidova%20et%20al.%20Sci%20Rep%202021%20Supplementary/@files/Proteomic%20analysis%20of%20134%20newborn%20samples/Proteomics%20analysis%20of%20134%20newborn%20samples.skyd
17 Aug 2021 20:18:42,391 INFO : Updating dataFileUrls for run Calibration peptide ALNSIIDVYHK.sky.zip; targetedms run ID 118308
17 Aug 2021 20:18:42,391 INFO : Updating dataFileUrl...
17 Aug 2021 20:18:42,391 INFO : from: file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/U%20of%20Masaryk%20RECETOX%20-%20Vidova%20et%20al.%20Sci%20Rep%202021%20Supplementary_673e4f17-e200-1039-a2b1-fea6ddf522ee/_temp__2021-08-17_20-17-03/export/xar/experiments_and_runs.xar.exploded/Run115425/Calibration%20peptide%20ALNSIIDVYHK/Calibration%20peptide%20ALNSIIDVYHK.skyd
17 Aug 2021 20:18:42,391 INFO : to: file:///data/labkey/files/Panorama%20Public/2021/U%20of%20Masaryk%20RECETOX%20-%20Vidova%20et%20al.%20Sci%20Rep%202021%20Supplementary/@files/Calibration%20peptide%20ALNSIIDVYHK/Calibration%20peptide%20ALNSIIDVYHK.skyd
17 Aug 2021 20:18:42,393 INFO : Updating dataFileUrl...
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17 Aug 2021 20:18:42,397 INFO : Updating dataFileUrls for run Calibration peptide AVLTIDEK.sky.zip; targetedms run ID 118309
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17 Aug 2021 20:18:42,402 INFO : Updating dataFileUrls for run Calibration peptide DASGATFTWTPSSGK.sky.zip; targetedms run ID 118310
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17 Aug 2021 20:18:42,408 INFO : Updating dataFileUrls for run Calibration peptide DLQNFLK.sky.zip; targetedms run ID 118311
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17 Aug 2021 20:18:42,414 INFO : Updating dataFileUrls for run Calibration, peptide DPPQYPVVPVHLDR.sky.zip; targetedms run ID 118312
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17 Aug 2021 20:18:42,426 INFO : Updating dataFileUrls for run Calibration peptide LGHPDTLNQGEFK.sky.zip; targetedms run ID 118314
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17 Aug 2021 20:18:42,432 INFO : Updating dataFileUrls for run Calibration peptide VVLEGGIDPILR.sky.zip; targetedms run ID 118315
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17 Aug 2021 20:18:42,436 INFO : Updating dataFileUrls for run Calibration, peptide SAVQGPPER.sky.zip; targetedms run ID 118316
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17 Aug 2021 20:18:42,441 INFO : Updating dataFileUrls for run Calibration peptide TPLTATLSK.sky.zip; targetedms run ID 118317
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17 Aug 2021 20:18:42,442 INFO : Updating dataFileUrl...
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17 Aug 2021 20:18:42,443 INFO : to: file:///data/labkey/files/Panorama%20Public/2021/U%20of%20Masaryk%20RECETOX%20-%20Vidova%20et%20al.%20Sci%20Rep%202021%20Supplementary/@files/Calibration%20peptide%20TPLTATLSK.sky.zip
17 Aug 2021 20:18:42,444 INFO : Making folder public.
17 Aug 2021 20:18:42,452 INFO : Hiding the Data Pipeline tab.
17 Aug 2021 20:18:42,571 INFO : Emailing submitter.
17 Aug 2021 20:18:42,697 INFO : Successfully completed task 'org.labkey.panoramapublic.pipeline.CopyExperimentFinalTask'