29 Mar 2021 06:45:06,916 INFO : Copying experiment "Targeted Phosphoinositides Analysis Using High Performance Ion Chromatography-Coupled Selected Reaction Monitoring Mass Spectrometry" from folder /ISAS - Protein Dynamics/2021_Targeted_Lipidomics_PIPsIC-MS_Cheung to /Panorama Public/2021/ISAS Protein Dynamics - 2021_Targeted_Lipidomics_PIPsIC-MS_Cheung
29 Mar 2021 06:45:06,916 INFO : =======================================
29 Mar 2021 06:45:07,114 INFO : Starting to run task 'org.labkey.panoramapublic.pipeline.ExperimentExportTask' at location 'webserver-high-priority'
29 Mar 2021 06:45:07,115 INFO : 
29 Mar 2021 06:45:07,115 INFO : Exporting experiment.
29 Mar 2021 06:45:20,337 INFO : 
29 Mar 2021 06:45:20,338 INFO : Experiment export completed successfully.
29 Mar 2021 06:45:20,338 INFO : Successfully completed task 'org.labkey.panoramapublic.pipeline.ExperimentExportTask'
29 Mar 2021 06:45:20,505 INFO : Starting to run task 'org.labkey.panoramapublic.pipeline.ExperimentImportTask' at location 'webserver-high-priority'
29 Mar 2021 06:45:20,505 INFO : 
29 Mar 2021 06:45:20,506 INFO : Importing experiment.
29 Mar 2021 06:45:20,523 INFO : Loading folder properties (folder type, settings and active modules)
29 Mar 2021 06:45:20,782 INFO : Done importing folder properties (folder type, settings and active modules)
29 Mar 2021 06:45:20,790 INFO : Loading etl definitions
29 Mar 2021 06:45:20,796 INFO : Loading wikis
29 Mar 2021 06:45:20,858 INFO : 0 wikis imported
29 Mar 2021 06:45:20,859 INFO : Done importing wikis
29 Mar 2021 06:45:20,859 INFO : Starting to copy files
29 Mar 2021 06:45:23,105 INFO : Copied 56 files
29 Mar 2021 06:45:23,105 INFO : Ensuring exp.data rows exist for imported files
29 Mar 2021 06:45:24,543 INFO : Loading xar
29 Mar 2021 06:45:26,011 DEBUG: Finished loading Protocol with LSID 'urn:lsid:uw.edu:Protocol.Folder-8377:TargetedMS.ImportSkyZip'
29 Mar 2021 06:45:26,020 DEBUG: Finished loading Protocol with LSID 'urn:lsid:uw.edu:Protocol.Folder-8377:TargetedMS.ImportSkyZip.Core'
29 Mar 2021 06:45:26,028 DEBUG: Finished loading Protocol with LSID 'urn:lsid:uw.edu:Protocol.Folder-8377:TargetedMS.ImportSkyZip.Output'
29 Mar 2021 06:45:26,028 DEBUG: Protocol import complete
29 Mar 2021 06:45:26,048 DEBUG: Finished loading Experiment with LSID 'urn:lsid:uw.edu:Experiment.Folder-8377:Targeted+Phosphoinositides+Analysis+Using+High+Performance+Ion+Chromatography-Coupled+Selected+Reaction+Monitoring+Mass+Spectrometry'
29 Mar 2021 06:45:26,049 DEBUG: Experiment/Run group import complete
29 Mar 2021 06:45:26,207 DEBUG: Protocol action set import complete
29 Mar 2021 06:45:26,247 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-8377:TargetedMS.ImportSkyZip'
29 Mar 2021 06:45:26,296 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:UploadedFile.Folder-8377:8680a3b6-6df7-1039-9674-3013bb9b91fd'
29 Mar 2021 06:45:26,327 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:skyd.Folder-8377:8680a5e6-6df7-1039-9674-3013bb9b91fd'
29 Mar 2021 06:45:26,327 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-8377:TargetedMS.ImportSkyZip.Core'
29 Mar 2021 06:45:26,336 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-8377:TargetedMS.ImportSkyZip.Output'
29 Mar 2021 06:45:26,338 DEBUG: Finished loading ExperimentRun with LSID 'urn:lsid:uw.edu:Run.Folder-8377:8680a5fe-6df7-1039-9674-3013bb9b91fd'
29 Mar 2021 06:45:26,362 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-8377:TargetedMS.ImportSkyZip'
29 Mar 2021 06:45:26,378 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:UploadedFile.Folder-8377:8680a9e4-6df7-1039-9674-3013bb9b91fd'
29 Mar 2021 06:45:26,390 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:skyd.Folder-8377:8680af52-6df7-1039-9674-3013bb9b91fd'
29 Mar 2021 06:45:26,390 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-8377:TargetedMS.ImportSkyZip.Core'
29 Mar 2021 06:45:26,397 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-8377:TargetedMS.ImportSkyZip.Output'
29 Mar 2021 06:45:26,399 DEBUG: Finished loading ExperimentRun with LSID 'urn:lsid:uw.edu:Run.Folder-8377:8680af81-6df7-1039-9674-3013bb9b91fd'
29 Mar 2021 06:45:26,423 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-8377:TargetedMS.ImportSkyZip'
29 Mar 2021 06:45:26,438 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:UploadedFile.Folder-8377:86809ae0-6df7-1039-9674-3013bb9b91fd'
29 Mar 2021 06:45:26,451 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:skyd.Folder-8377:86809c8b-6df7-1039-9674-3013bb9b91fd'
29 Mar 2021 06:45:26,451 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-8377:TargetedMS.ImportSkyZip.Core'
29 Mar 2021 06:45:26,458 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-8377:TargetedMS.ImportSkyZip.Output'
29 Mar 2021 06:45:26,459 DEBUG: Finished loading ExperimentRun with LSID 'urn:lsid:uw.edu:Run.Folder-8377:86809c9d-6df7-1039-9674-3013bb9b91fd'
29 Mar 2021 06:45:26,501 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-8377:TargetedMS.ImportSkyZip'
29 Mar 2021 06:45:26,517 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:UploadedFile.Folder-8377:8680a012-6df7-1039-9674-3013bb9b91fd'
29 Mar 2021 06:45:26,541 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:skyd.Folder-8377:8680a11c-6df7-1039-9674-3013bb9b91fd'
29 Mar 2021 06:45:26,541 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-8377:TargetedMS.ImportSkyZip.Core'
29 Mar 2021 06:45:26,548 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-8377:TargetedMS.ImportSkyZip.Output'
29 Mar 2021 06:45:26,550 DEBUG: Finished loading ExperimentRun with LSID 'urn:lsid:uw.edu:Run.Folder-8377:8680a14e-6df7-1039-9674-3013bb9b91fd'
29 Mar 2021 06:45:26,575 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-8377:TargetedMS.ImportSkyZip'
29 Mar 2021 06:45:26,590 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:UploadedFile.Folder-8377:8680959e-6df7-1039-9674-3013bb9b91fd'
29 Mar 2021 06:45:26,602 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:skyd.Folder-8377:86809603-6df7-1039-9674-3013bb9b91fd'
29 Mar 2021 06:45:26,603 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-8377:TargetedMS.ImportSkyZip.Core'
29 Mar 2021 06:45:26,609 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-8377:TargetedMS.ImportSkyZip.Output'
29 Mar 2021 06:45:26,611 DEBUG: Finished loading ExperimentRun with LSID 'urn:lsid:uw.edu:Run.Folder-8377:8680961a-6df7-1039-9674-3013bb9b91fd'
29 Mar 2021 06:45:26,636 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-8377:TargetedMS.ImportSkyZip'
29 Mar 2021 06:45:26,652 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:UploadedFile.Folder-8377:8680933b-6df7-1039-9674-3013bb9b91fd'
29 Mar 2021 06:45:26,665 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:skyd.Folder-8377:868093a4-6df7-1039-9674-3013bb9b91fd'
29 Mar 2021 06:45:26,665 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-8377:TargetedMS.ImportSkyZip.Core'
29 Mar 2021 06:45:26,672 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-8377:TargetedMS.ImportSkyZip.Output'
29 Mar 2021 06:45:26,674 DEBUG: Finished loading ExperimentRun with LSID 'urn:lsid:uw.edu:Run.Folder-8377:868093e6-6df7-1039-9674-3013bb9b91fd'
29 Mar 2021 06:45:26,698 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-8377:TargetedMS.ImportSkyZip'
29 Mar 2021 06:45:26,733 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:UploadedFile.Folder-8377:c02a7c70-6df6-1039-9674-3013bb9b91fd'
29 Mar 2021 06:45:26,751 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:skyd.Folder-8377:c02a7cc2-6df6-1039-9674-3013bb9b91fd'
29 Mar 2021 06:45:26,752 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-8377:TargetedMS.ImportSkyZip.Core'
29 Mar 2021 06:45:26,761 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-8377:TargetedMS.ImportSkyZip.Output'
29 Mar 2021 06:45:26,764 DEBUG: Finished loading ExperimentRun with LSID 'urn:lsid:uw.edu:Run.Folder-8377:c02a7ced-6df6-1039-9674-3013bb9b91fd'
29 Mar 2021 06:45:26,802 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-8377:TargetedMS.ImportSkyZip'
29 Mar 2021 06:45:26,824 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:UploadedFile.Folder-8377:c02a7878-6df6-1039-9674-3013bb9b91fd'
29 Mar 2021 06:45:26,839 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:skyd.Folder-8377:c02a7966-6df6-1039-9674-3013bb9b91fd'
29 Mar 2021 06:45:26,840 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-8377:TargetedMS.ImportSkyZip.Core'
29 Mar 2021 06:45:26,891 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-8377:TargetedMS.ImportSkyZip.Output'
29 Mar 2021 06:45:26,893 DEBUG: Finished loading ExperimentRun with LSID 'urn:lsid:uw.edu:Run.Folder-8377:c02a797c-6df6-1039-9674-3013bb9b91fd'
29 Mar 2021 06:45:26,918 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-8377:TargetedMS.ImportSkyZip'
29 Mar 2021 06:45:26,934 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:UploadedFile.Folder-8377:c02a7021-6df6-1039-9674-3013bb9b91fd'
29 Mar 2021 06:45:26,971 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:skyd.Folder-8377:c02a7185-6df6-1039-9674-3013bb9b91fd'
29 Mar 2021 06:45:26,971 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-8377:TargetedMS.ImportSkyZip.Core'
29 Mar 2021 06:45:26,978 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-8377:TargetedMS.ImportSkyZip.Output'
29 Mar 2021 06:45:26,980 DEBUG: Finished loading ExperimentRun with LSID 'urn:lsid:uw.edu:Run.Folder-8377:c02a720f-6df6-1039-9674-3013bb9b91fd'
29 Mar 2021 06:45:27,005 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-8377:TargetedMS.ImportSkyZip'
29 Mar 2021 06:45:27,022 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:UploadedFile.Folder-8377:5276ec1e-6af7-1039-9674-3013bb9b91fd'
29 Mar 2021 06:45:27,035 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:skyd.Folder-8377:5276ed96-6af7-1039-9674-3013bb9b91fd'
29 Mar 2021 06:45:27,035 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-8377:TargetedMS.ImportSkyZip.Core'
29 Mar 2021 06:45:27,042 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-8377:TargetedMS.ImportSkyZip.Output'
29 Mar 2021 06:45:27,044 DEBUG: Finished loading ExperimentRun with LSID 'urn:lsid:uw.edu:Run.Folder-8377:5276edb7-6af7-1039-9674-3013bb9b91fd'
29 Mar 2021 06:45:27,072 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-8377:TargetedMS.ImportSkyZip'
29 Mar 2021 06:45:27,087 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:UploadedFile.Folder-8377:5276da55-6af7-1039-9674-3013bb9b91fd'
29 Mar 2021 06:45:27,100 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:skyd.Folder-8377:5276dd89-6af7-1039-9674-3013bb9b91fd'
29 Mar 2021 06:45:27,100 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-8377:TargetedMS.ImportSkyZip.Core'
29 Mar 2021 06:45:27,107 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-8377:TargetedMS.ImportSkyZip.Output'
29 Mar 2021 06:45:27,108 DEBUG: Finished loading ExperimentRun with LSID 'urn:lsid:uw.edu:Run.Folder-8377:5276ddbb-6af7-1039-9674-3013bb9b91fd'
29 Mar 2021 06:45:27,112 DEBUG: Trying to load data file file:///data/apache-tomcat/temp/Pipeline_temp/ISAS%20Protein%20Dynamics%20-%202021_Targeted_Lipidomics_PIPsIC-MS_Cheung_e3048364-72c1-1039-9674-3013bb9b91fd/_temp__2021-03-29_06-45-06/export/xar/experiments_and_runs.xar.exploded/Run104142/PIPs%20MRM%20190930%20OP9.sky.zip into the system
29 Mar 2021 06:45:27,117 INFO : Starting import from PIPs MRM 190930 OP9.sky.zip
29 Mar 2021 06:45:27,130 INFO : Starting to import Skyline document from PIPs MRM 190930 OP9.sky.zip
29 Mar 2021 06:45:27,131 INFO : Expanding PIPs MRM 190930 OP9.skyd
29 Mar 2021 06:45:27,140 INFO : Expanding PIPs MRM 190930 OP9.sky.view
29 Mar 2021 06:45:27,141 INFO : Expanding PIPs MRM 190930 OP9.sky
29 Mar 2021 06:45:27,166 INFO : 7% Done
29 Mar 2021 06:45:27,172 DEBUG: Starting to load chromatogram headers
29 Mar 2021 06:45:27,172 DEBUG: Done loading chromatogram headers
29 Mar 2021 06:45:27,255 INFO : Inserting PIPs
29 Mar 2021 06:45:27,302 INFO : 18% Done
29 Mar 2021 06:45:27,420 INFO : 29% Done
29 Mar 2021 06:45:27,502 INFO : 39% Done
29 Mar 2021 06:45:27,561 INFO : 51% Done
29 Mar 2021 06:45:27,634 INFO : 60% Done
29 Mar 2021 06:45:27,691 INFO : 69% Done
29 Mar 2021 06:45:27,746 INFO : 72% Done
29 Mar 2021 06:45:27,772 INFO : 83% Done
29 Mar 2021 06:45:27,839 INFO : 92% Done
29 Mar 2021 06:45:27,893 INFO : 98% Done
29 Mar 2021 06:45:27,920 DEBUG: Total molecules inserted: 11
29 Mar 2021 06:45:27,922 INFO : Done parsing Skyline document.
29 Mar 2021 06:45:27,926 INFO : Creating and populating temp tables for Proportion values
29 Mar 2021 06:45:27,954 INFO : Setting PrecursorModifiedAreaProportion values on precursorchrominfo
29 Mar 2021 06:45:27,980 INFO : Setting ModifiedAreaProportion values on generalmoleculechrominfo
29 Mar 2021 06:45:28,000 INFO : Cleaning up temp tables
29 Mar 2021 06:45:28,558 INFO : Completed import of Skyline document from PIPs MRM 190930 OP9.sky.zip
29 Mar 2021 06:45:28,565 INFO : 100% Done
29 Mar 2021 06:45:28,576 DEBUG: Finished trying to load data file file:///data/apache-tomcat/temp/Pipeline_temp/ISAS%20Protein%20Dynamics%20-%202021_Targeted_Lipidomics_PIPsIC-MS_Cheung_e3048364-72c1-1039-9674-3013bb9b91fd/_temp__2021-03-29_06-45-06/export/xar/experiments_and_runs.xar.exploded/Run104142/PIPs%20MRM%20190930%20OP9.sky.zip into the system
29 Mar 2021 06:45:28,576 DEBUG: Trying to load data file file:///data/apache-tomcat/temp/Pipeline_temp/ISAS%20Protein%20Dynamics%20-%202021_Targeted_Lipidomics_PIPsIC-MS_Cheung_e3048364-72c1-1039-9674-3013bb9b91fd/_temp__2021-03-29_06-45-06/export/xar/experiments_and_runs.xar.exploded/Run104142/PIPs%20MRM%20190930%20OP9/PIPs%20MRM%20190930%20OP9.skyd into the system
29 Mar 2021 06:45:28,577 DEBUG: Finished trying to load data file file:///data/apache-tomcat/temp/Pipeline_temp/ISAS%20Protein%20Dynamics%20-%202021_Targeted_Lipidomics_PIPsIC-MS_Cheung_e3048364-72c1-1039-9674-3013bb9b91fd/_temp__2021-03-29_06-45-06/export/xar/experiments_and_runs.xar.exploded/Run104142/PIPs%20MRM%20190930%20OP9/PIPs%20MRM%20190930%20OP9.skyd into the system
29 Mar 2021 06:45:28,578 DEBUG: Trying to load data file file:///data/apache-tomcat/temp/Pipeline_temp/ISAS%20Protein%20Dynamics%20-%202021_Targeted_Lipidomics_PIPsIC-MS_Cheung_e3048364-72c1-1039-9674-3013bb9b91fd/_temp__2021-03-29_06-45-06/export/xar/experiments_and_runs.xar.exploded/Run104143/PIPs%20MRM%20191001%20Donor%2045.sky.zip into the system
29 Mar 2021 06:45:28,580 INFO : Starting import from PIPs MRM 191001 Donor 45.sky.zip
29 Mar 2021 06:45:28,587 INFO : Starting to import Skyline document from PIPs MRM 191001 Donor 45.sky.zip
29 Mar 2021 06:45:28,588 INFO : Expanding PIPs MRM 191001 Donor 45.skyd
29 Mar 2021 06:45:28,604 INFO : Expanding PIPs MRM 191001 Donor 45.sky.view
29 Mar 2021 06:45:28,605 INFO : Expanding PIPs MRM 191001 Donor 45.sky
29 Mar 2021 06:45:28,624 INFO : 6% Done
29 Mar 2021 06:45:28,633 DEBUG: Starting to load chromatogram headers
29 Mar 2021 06:45:28,634 DEBUG: Done loading chromatogram headers
29 Mar 2021 06:45:28,706 INFO : Inserting PIPs
29 Mar 2021 06:45:28,719 INFO : 20% Done
29 Mar 2021 06:45:28,782 INFO : 29% Done
29 Mar 2021 06:45:28,894 INFO : 38% Done
29 Mar 2021 06:45:29,002 INFO : 50% Done
29 Mar 2021 06:45:29,105 INFO : 60% Done
29 Mar 2021 06:45:29,200 INFO : 70% Done
29 Mar 2021 06:45:29,299 INFO : 71% Done
29 Mar 2021 06:45:29,319 INFO : 80% Done
29 Mar 2021 06:45:29,394 INFO : 82% Done
29 Mar 2021 06:45:29,403 INFO : 92% Done
29 Mar 2021 06:45:29,491 INFO : 98% Done
29 Mar 2021 06:45:29,541 DEBUG: Total molecules inserted: 11
29 Mar 2021 06:45:29,542 INFO : Done parsing Skyline document.
29 Mar 2021 06:45:29,543 INFO : Creating and populating temp tables for Proportion values
29 Mar 2021 06:45:29,558 INFO : Setting PrecursorModifiedAreaProportion values on precursorchrominfo
29 Mar 2021 06:45:29,633 INFO : Setting ModifiedAreaProportion values on generalmoleculechrominfo
29 Mar 2021 06:45:29,648 INFO : Cleaning up temp tables
29 Mar 2021 06:45:30,041 INFO : Completed import of Skyline document from PIPs MRM 191001 Donor 45.sky.zip
29 Mar 2021 06:45:30,047 INFO : 100% Done
29 Mar 2021 06:45:30,056 DEBUG: Finished trying to load data file file:///data/apache-tomcat/temp/Pipeline_temp/ISAS%20Protein%20Dynamics%20-%202021_Targeted_Lipidomics_PIPsIC-MS_Cheung_e3048364-72c1-1039-9674-3013bb9b91fd/_temp__2021-03-29_06-45-06/export/xar/experiments_and_runs.xar.exploded/Run104143/PIPs%20MRM%20191001%20Donor%2045.sky.zip into the system
29 Mar 2021 06:45:30,056 DEBUG: Trying to load data file file:///data/apache-tomcat/temp/Pipeline_temp/ISAS%20Protein%20Dynamics%20-%202021_Targeted_Lipidomics_PIPsIC-MS_Cheung_e3048364-72c1-1039-9674-3013bb9b91fd/_temp__2021-03-29_06-45-06/export/xar/experiments_and_runs.xar.exploded/Run104143/PIPs%20MRM%20191001%20Donor%2045/PIPs%20MRM%20191001%20Donor%2045.skyd into the system
29 Mar 2021 06:45:30,058 DEBUG: Finished trying to load data file file:///data/apache-tomcat/temp/Pipeline_temp/ISAS%20Protein%20Dynamics%20-%202021_Targeted_Lipidomics_PIPsIC-MS_Cheung_e3048364-72c1-1039-9674-3013bb9b91fd/_temp__2021-03-29_06-45-06/export/xar/experiments_and_runs.xar.exploded/Run104143/PIPs%20MRM%20191001%20Donor%2045/PIPs%20MRM%20191001%20Donor%2045.skyd into the system
29 Mar 2021 06:45:30,058 DEBUG: Trying to load data file file:///data/apache-tomcat/temp/Pipeline_temp/ISAS%20Protein%20Dynamics%20-%202021_Targeted_Lipidomics_PIPsIC-MS_Cheung_e3048364-72c1-1039-9674-3013bb9b91fd/_temp__2021-03-29_06-45-06/export/xar/experiments_and_runs.xar.exploded/Run104140/20191114%20Extraction%20efficiency.sky.zip into the system
29 Mar 2021 06:45:30,061 INFO : Starting import from 20191114 Extraction efficiency.sky.zip
29 Mar 2021 06:45:30,066 INFO : Starting to import Skyline document from 20191114 Extraction efficiency.sky.zip
29 Mar 2021 06:45:30,067 INFO : Expanding 20191114 Extraction efficiency.skyd
29 Mar 2021 06:45:30,083 INFO : Expanding 20191114 Extraction efficiency.sky.view
29 Mar 2021 06:45:30,084 INFO : Expanding 20191114 Extraction efficiency.sky
29 Mar 2021 06:45:30,100 INFO : 8% Done
29 Mar 2021 06:45:30,108 DEBUG: Starting to load chromatogram headers
29 Mar 2021 06:45:30,109 DEBUG: Done loading chromatogram headers
29 Mar 2021 06:45:30,194 INFO : Inserting PIPs
29 Mar 2021 06:45:30,206 INFO : 20% Done
29 Mar 2021 06:45:30,252 INFO : 29% Done
29 Mar 2021 06:45:30,292 INFO : 39% Done
29 Mar 2021 06:45:30,332 INFO : 49% Done
29 Mar 2021 06:45:30,373 INFO : 59% Done
29 Mar 2021 06:45:30,430 INFO : 70% Done
29 Mar 2021 06:45:30,499 INFO : 72% Done
29 Mar 2021 06:45:30,516 INFO : 81% Done
29 Mar 2021 06:45:30,579 INFO : 83% Done
29 Mar 2021 06:45:30,603 INFO : 93% Done
29 Mar 2021 06:45:30,672 INFO : 98% Done
29 Mar 2021 06:45:30,719 DEBUG: Total molecules inserted: 11
29 Mar 2021 06:45:30,721 INFO : Done parsing Skyline document.
29 Mar 2021 06:45:30,725 INFO : Creating and populating temp tables for Proportion values
29 Mar 2021 06:45:30,756 INFO : Setting PrecursorModifiedAreaProportion values on precursorchrominfo
29 Mar 2021 06:45:30,847 INFO : Setting ModifiedAreaProportion values on generalmoleculechrominfo
29 Mar 2021 06:45:30,893 INFO : Cleaning up temp tables
29 Mar 2021 06:45:31,465 INFO : Completed import of Skyline document from 20191114 Extraction efficiency.sky.zip
29 Mar 2021 06:45:31,474 INFO : 100% Done
29 Mar 2021 06:45:31,486 DEBUG: Finished trying to load data file file:///data/apache-tomcat/temp/Pipeline_temp/ISAS%20Protein%20Dynamics%20-%202021_Targeted_Lipidomics_PIPsIC-MS_Cheung_e3048364-72c1-1039-9674-3013bb9b91fd/_temp__2021-03-29_06-45-06/export/xar/experiments_and_runs.xar.exploded/Run104140/20191114%20Extraction%20efficiency.sky.zip into the system
29 Mar 2021 06:45:31,487 DEBUG: Trying to load data file file:///data/apache-tomcat/temp/Pipeline_temp/ISAS%20Protein%20Dynamics%20-%202021_Targeted_Lipidomics_PIPsIC-MS_Cheung_e3048364-72c1-1039-9674-3013bb9b91fd/_temp__2021-03-29_06-45-06/export/xar/experiments_and_runs.xar.exploded/Run104140/20191114%20Extraction%20efficiency/20191114%20Extraction%20efficiency.skyd into the system
29 Mar 2021 06:45:31,488 DEBUG: Finished trying to load data file file:///data/apache-tomcat/temp/Pipeline_temp/ISAS%20Protein%20Dynamics%20-%202021_Targeted_Lipidomics_PIPsIC-MS_Cheung_e3048364-72c1-1039-9674-3013bb9b91fd/_temp__2021-03-29_06-45-06/export/xar/experiments_and_runs.xar.exploded/Run104140/20191114%20Extraction%20efficiency/20191114%20Extraction%20efficiency.skyd into the system
29 Mar 2021 06:45:31,488 DEBUG: Trying to load data file file:///data/apache-tomcat/temp/Pipeline_temp/ISAS%20Protein%20Dynamics%20-%202021_Targeted_Lipidomics_PIPsIC-MS_Cheung_e3048364-72c1-1039-9674-3013bb9b91fd/_temp__2021-03-29_06-45-06/export/xar/experiments_and_runs.xar.exploded/Run104141/D2%2015%20CRP.sky.zip into the system
29 Mar 2021 06:45:31,492 INFO : Starting import from D2 15 CRP.sky.zip
29 Mar 2021 06:45:31,499 INFO : Starting to import Skyline document from D2 15 CRP.sky.zip
29 Mar 2021 06:45:31,501 INFO : Expanding D2 15 CRP.skyd
29 Mar 2021 06:45:31,517 INFO : Expanding D2 15 CRP.sky.view
29 Mar 2021 06:45:31,517 INFO : Expanding D2 15 CRP.sky
29 Mar 2021 06:45:31,539 INFO : 8% Done
29 Mar 2021 06:45:31,548 DEBUG: Starting to load chromatogram headers
29 Mar 2021 06:45:31,548 DEBUG: Done loading chromatogram headers
29 Mar 2021 06:45:31,630 INFO : Inserting PIPs
29 Mar 2021 06:45:31,645 INFO : 19% Done
29 Mar 2021 06:45:31,723 INFO : 30% Done
29 Mar 2021 06:45:31,800 INFO : 40% Done
29 Mar 2021 06:45:31,871 INFO : 49% Done
29 Mar 2021 06:45:31,936 INFO : 61% Done
29 Mar 2021 06:45:32,002 INFO : 70% Done
29 Mar 2021 06:45:32,075 INFO : 81% Done
29 Mar 2021 06:45:32,154 INFO : 93% Done
29 Mar 2021 06:45:32,232 INFO : 98% Done
29 Mar 2021 06:45:32,280 DEBUG: Total molecules inserted: 11
29 Mar 2021 06:45:32,282 INFO : Done parsing Skyline document.
29 Mar 2021 06:45:32,285 INFO : Creating and populating temp tables for Proportion values
29 Mar 2021 06:45:32,445 INFO : Setting PrecursorModifiedAreaProportion values on precursorchrominfo
29 Mar 2021 06:45:32,499 INFO : Setting ModifiedAreaProportion values on generalmoleculechrominfo
29 Mar 2021 06:45:32,510 INFO : Cleaning up temp tables
29 Mar 2021 06:45:33,086 INFO : Completed import of Skyline document from D2 15 CRP.sky.zip
29 Mar 2021 06:45:33,093 INFO : 100% Done
29 Mar 2021 06:45:33,102 DEBUG: Finished trying to load data file file:///data/apache-tomcat/temp/Pipeline_temp/ISAS%20Protein%20Dynamics%20-%202021_Targeted_Lipidomics_PIPsIC-MS_Cheung_e3048364-72c1-1039-9674-3013bb9b91fd/_temp__2021-03-29_06-45-06/export/xar/experiments_and_runs.xar.exploded/Run104141/D2%2015%20CRP.sky.zip into the system
29 Mar 2021 06:45:33,102 DEBUG: Trying to load data file file:///data/apache-tomcat/temp/Pipeline_temp/ISAS%20Protein%20Dynamics%20-%202021_Targeted_Lipidomics_PIPsIC-MS_Cheung_e3048364-72c1-1039-9674-3013bb9b91fd/_temp__2021-03-29_06-45-06/export/xar/experiments_and_runs.xar.exploded/Run104141/D2%2015%20CRP/D2%2015%20CRP.skyd into the system
29 Mar 2021 06:45:33,103 DEBUG: Finished trying to load data file file:///data/apache-tomcat/temp/Pipeline_temp/ISAS%20Protein%20Dynamics%20-%202021_Targeted_Lipidomics_PIPsIC-MS_Cheung_e3048364-72c1-1039-9674-3013bb9b91fd/_temp__2021-03-29_06-45-06/export/xar/experiments_and_runs.xar.exploded/Run104141/D2%2015%20CRP/D2%2015%20CRP.skyd into the system
29 Mar 2021 06:45:33,103 DEBUG: Trying to load data file file:///data/apache-tomcat/temp/Pipeline_temp/ISAS%20Protein%20Dynamics%20-%202021_Targeted_Lipidomics_PIPsIC-MS_Cheung_e3048364-72c1-1039-9674-3013bb9b91fd/_temp__2021-03-29_06-45-06/export/xar/experiments_and_runs.xar.exploded/Run104139/20191108%20Gradient.sky.zip into the system
29 Mar 2021 06:45:33,105 INFO : Starting import from 20191108 Gradient.sky.zip
29 Mar 2021 06:45:33,110 INFO : Starting to import Skyline document from 20191108 Gradient.sky.zip
29 Mar 2021 06:45:33,111 INFO : Expanding 20191108 Gradient.skyd
29 Mar 2021 06:45:33,123 INFO : Expanding 20191108 Gradient.sky.view
29 Mar 2021 06:45:33,123 INFO : Expanding 20191108 Gradient.sky
29 Mar 2021 06:45:33,154 INFO : 13% Done
29 Mar 2021 06:45:33,155 DEBUG: Starting to load chromatogram headers
29 Mar 2021 06:45:33,155 DEBUG: Done loading chromatogram headers
29 Mar 2021 06:45:33,175 INFO : Inserting PIPs
29 Mar 2021 06:45:33,185 INFO : 24% Done
29 Mar 2021 06:45:33,208 INFO : 30% Done
29 Mar 2021 06:45:33,238 INFO : 38% Done
29 Mar 2021 06:45:33,256 INFO : 54% Done
29 Mar 2021 06:45:33,275 INFO : 62% Done
29 Mar 2021 06:45:33,293 INFO : 70% Done
29 Mar 2021 06:45:33,324 INFO : 77% Done
29 Mar 2021 06:45:33,335 INFO : 84% Done
29 Mar 2021 06:45:33,360 INFO : 92% Done
29 Mar 2021 06:45:33,379 INFO : 98% Done
29 Mar 2021 06:45:33,388 DEBUG: Total molecules inserted: 11
29 Mar 2021 06:45:33,390 INFO : Done parsing Skyline document.
29 Mar 2021 06:45:33,392 INFO : Creating and populating temp tables for Proportion values
29 Mar 2021 06:45:33,433 INFO : Setting PrecursorModifiedAreaProportion values on precursorchrominfo
29 Mar 2021 06:45:33,442 INFO : Setting ModifiedAreaProportion values on generalmoleculechrominfo
29 Mar 2021 06:45:33,448 INFO : Cleaning up temp tables
29 Mar 2021 06:45:34,008 INFO : Completed import of Skyline document from 20191108 Gradient.sky.zip
29 Mar 2021 06:45:34,016 INFO : 100% Done
29 Mar 2021 06:45:34,027 DEBUG: Finished trying to load data file file:///data/apache-tomcat/temp/Pipeline_temp/ISAS%20Protein%20Dynamics%20-%202021_Targeted_Lipidomics_PIPsIC-MS_Cheung_e3048364-72c1-1039-9674-3013bb9b91fd/_temp__2021-03-29_06-45-06/export/xar/experiments_and_runs.xar.exploded/Run104139/20191108%20Gradient.sky.zip into the system
29 Mar 2021 06:45:34,028 DEBUG: Trying to load data file file:///data/apache-tomcat/temp/Pipeline_temp/ISAS%20Protein%20Dynamics%20-%202021_Targeted_Lipidomics_PIPsIC-MS_Cheung_e3048364-72c1-1039-9674-3013bb9b91fd/_temp__2021-03-29_06-45-06/export/xar/experiments_and_runs.xar.exploded/Run104139/20191108%20Gradient/20191108%20Gradient.skyd into the system
29 Mar 2021 06:45:34,029 DEBUG: Finished trying to load data file file:///data/apache-tomcat/temp/Pipeline_temp/ISAS%20Protein%20Dynamics%20-%202021_Targeted_Lipidomics_PIPsIC-MS_Cheung_e3048364-72c1-1039-9674-3013bb9b91fd/_temp__2021-03-29_06-45-06/export/xar/experiments_and_runs.xar.exploded/Run104139/20191108%20Gradient/20191108%20Gradient.skyd into the system
29 Mar 2021 06:45:34,029 DEBUG: Trying to load data file file:///data/apache-tomcat/temp/Pipeline_temp/ISAS%20Protein%20Dynamics%20-%202021_Targeted_Lipidomics_PIPsIC-MS_Cheung_e3048364-72c1-1039-9674-3013bb9b91fd/_temp__2021-03-29_06-45-06/export/xar/experiments_and_runs.xar.exploded/Run104138/20191105%20Calibration%20curve.sky.zip into the system
29 Mar 2021 06:45:34,033 INFO : Starting import from 20191105 Calibration curve.sky.zip
29 Mar 2021 06:45:34,040 INFO : Starting to import Skyline document from 20191105 Calibration curve.sky.zip
29 Mar 2021 06:45:34,042 INFO : Expanding 20191105 Calibration curve.skyd
29 Mar 2021 06:45:34,066 INFO : Expanding 20191105 Calibration curve.sky.view
29 Mar 2021 06:45:34,067 INFO : Expanding 20191105 Calibration curve.sky
29 Mar 2021 06:45:34,092 INFO : 7% Done
29 Mar 2021 06:45:34,103 DEBUG: Starting to load chromatogram headers
29 Mar 2021 06:45:34,104 DEBUG: Done loading chromatogram headers
29 Mar 2021 06:45:34,231 INFO : Inserting PIPs
29 Mar 2021 06:45:34,245 INFO : 19% Done
29 Mar 2021 06:45:34,353 INFO : 28% Done
29 Mar 2021 06:45:34,456 INFO : 39% Done
29 Mar 2021 06:45:34,563 INFO : 50% Done
29 Mar 2021 06:45:34,661 INFO : 61% Done
29 Mar 2021 06:45:34,831 INFO : 70% Done
29 Mar 2021 06:45:34,928 INFO : 71% Done
29 Mar 2021 06:45:34,946 INFO : 81% Done
29 Mar 2021 06:45:35,189 INFO : 92% Done
29 Mar 2021 06:45:35,540 INFO : 98% Done
29 Mar 2021 06:45:35,642 DEBUG: Total molecules inserted: 11
29 Mar 2021 06:45:35,644 INFO : Done parsing Skyline document.
29 Mar 2021 06:45:35,647 INFO : Creating and populating temp tables for Proportion values
29 Mar 2021 06:45:35,692 INFO : Setting PrecursorModifiedAreaProportion values on precursorchrominfo
29 Mar 2021 06:45:36,182 INFO : Setting ModifiedAreaProportion values on generalmoleculechrominfo
29 Mar 2021 06:45:36,249 INFO : Cleaning up temp tables
29 Mar 2021 06:45:36,726 INFO : Completed import of Skyline document from 20191105 Calibration curve.sky.zip
29 Mar 2021 06:45:36,763 INFO : 100% Done
29 Mar 2021 06:45:36,774 DEBUG: Finished trying to load data file file:///data/apache-tomcat/temp/Pipeline_temp/ISAS%20Protein%20Dynamics%20-%202021_Targeted_Lipidomics_PIPsIC-MS_Cheung_e3048364-72c1-1039-9674-3013bb9b91fd/_temp__2021-03-29_06-45-06/export/xar/experiments_and_runs.xar.exploded/Run104138/20191105%20Calibration%20curve.sky.zip into the system
29 Mar 2021 06:45:36,775 DEBUG: Trying to load data file file:///data/apache-tomcat/temp/Pipeline_temp/ISAS%20Protein%20Dynamics%20-%202021_Targeted_Lipidomics_PIPsIC-MS_Cheung_e3048364-72c1-1039-9674-3013bb9b91fd/_temp__2021-03-29_06-45-06/export/xar/experiments_and_runs.xar.exploded/Run104138/20191105%20Calibration%20curve/20191105%20Calibration%20curve.skyd into the system
29 Mar 2021 06:45:36,777 DEBUG: Finished trying to load data file file:///data/apache-tomcat/temp/Pipeline_temp/ISAS%20Protein%20Dynamics%20-%202021_Targeted_Lipidomics_PIPsIC-MS_Cheung_e3048364-72c1-1039-9674-3013bb9b91fd/_temp__2021-03-29_06-45-06/export/xar/experiments_and_runs.xar.exploded/Run104138/20191105%20Calibration%20curve/20191105%20Calibration%20curve.skyd into the system
29 Mar 2021 06:45:36,777 DEBUG: Trying to load data file file:///data/apache-tomcat/temp/Pipeline_temp/ISAS%20Protein%20Dynamics%20-%202021_Targeted_Lipidomics_PIPsIC-MS_Cheung_e3048364-72c1-1039-9674-3013bb9b91fd/_temp__2021-03-29_06-45-06/export/xar/experiments_and_runs.xar.exploded/Run104137/20191003%20Donor%206-7%20+%20calibration%20curve.sky.zip into the system
29 Mar 2021 06:45:36,781 INFO : Starting import from 20191003 Donor 6-7 + calibration curve.sky.zip
29 Mar 2021 06:45:36,788 INFO : Starting to import Skyline document from 20191003 Donor 6-7 + calibration curve.sky.zip
29 Mar 2021 06:45:36,790 INFO : Expanding 20191003 Donor 6-7 + calibration curve.skyd
29 Mar 2021 06:45:36,819 INFO : Expanding 20191003 Donor 6-7 + calibration curve.sky.view
29 Mar 2021 06:45:36,820 INFO : Expanding 20191003 Donor 6-7 + calibration curve.sky
29 Mar 2021 06:45:36,845 INFO : 7% Done
29 Mar 2021 06:45:36,860 DEBUG: Starting to load chromatogram headers
29 Mar 2021 06:45:36,861 DEBUG: Done loading chromatogram headers
29 Mar 2021 06:45:37,008 INFO : Inserting PIPs
29 Mar 2021 06:45:37,025 INFO : 19% Done
29 Mar 2021 06:45:37,165 INFO : 28% Done
29 Mar 2021 06:45:37,305 INFO : 40% Done
29 Mar 2021 06:45:37,465 INFO : 50% Done
29 Mar 2021 06:45:37,565 INFO : 60% Done
29 Mar 2021 06:45:37,627 INFO : 70% Done
29 Mar 2021 06:45:37,698 INFO : 71% Done
29 Mar 2021 06:45:37,707 INFO : 80% Done
29 Mar 2021 06:45:37,762 INFO : 82% Done
29 Mar 2021 06:45:37,770 INFO : 92% Done
29 Mar 2021 06:45:37,861 INFO : 98% Done
29 Mar 2021 06:45:37,910 DEBUG: Total molecules inserted: 11
29 Mar 2021 06:45:37,911 INFO : Done parsing Skyline document.
29 Mar 2021 06:45:37,912 INFO : Creating and populating temp tables for Proportion values
29 Mar 2021 06:45:37,928 INFO : Setting PrecursorModifiedAreaProportion values on precursorchrominfo
29 Mar 2021 06:45:38,338 INFO : Setting ModifiedAreaProportion values on generalmoleculechrominfo
29 Mar 2021 06:45:38,387 INFO : Cleaning up temp tables
29 Mar 2021 06:45:38,741 INFO : Completed import of Skyline document from 20191003 Donor 6-7 + calibration curve.sky.zip
29 Mar 2021 06:45:38,745 INFO : 100% Done
29 Mar 2021 06:45:38,751 DEBUG: Finished trying to load data file file:///data/apache-tomcat/temp/Pipeline_temp/ISAS%20Protein%20Dynamics%20-%202021_Targeted_Lipidomics_PIPsIC-MS_Cheung_e3048364-72c1-1039-9674-3013bb9b91fd/_temp__2021-03-29_06-45-06/export/xar/experiments_and_runs.xar.exploded/Run104137/20191003%20Donor%206-7%20+%20calibration%20curve.sky.zip into the system
29 Mar 2021 06:45:38,751 DEBUG: Trying to load data file file:///data/apache-tomcat/temp/Pipeline_temp/ISAS%20Protein%20Dynamics%20-%202021_Targeted_Lipidomics_PIPsIC-MS_Cheung_e3048364-72c1-1039-9674-3013bb9b91fd/_temp__2021-03-29_06-45-06/export/xar/experiments_and_runs.xar.exploded/Run104137/20191003%20Donor%206-7%20+%20calibration%20curve/20191003%20Donor%206-7%20+%20calibration%20curve.skyd into the system
29 Mar 2021 06:45:38,752 DEBUG: Finished trying to load data file file:///data/apache-tomcat/temp/Pipeline_temp/ISAS%20Protein%20Dynamics%20-%202021_Targeted_Lipidomics_PIPsIC-MS_Cheung_e3048364-72c1-1039-9674-3013bb9b91fd/_temp__2021-03-29_06-45-06/export/xar/experiments_and_runs.xar.exploded/Run104137/20191003%20Donor%206-7%20+%20calibration%20curve/20191003%20Donor%206-7%20+%20calibration%20curve.skyd into the system
29 Mar 2021 06:45:38,752 DEBUG: Trying to load data file file:///data/apache-tomcat/temp/Pipeline_temp/ISAS%20Protein%20Dynamics%20-%202021_Targeted_Lipidomics_PIPsIC-MS_Cheung_e3048364-72c1-1039-9674-3013bb9b91fd/_temp__2021-03-29_06-45-06/export/xar/experiments_and_runs.xar.exploded/Run104136/20191002%20Brain%20samples.sky.zip into the system
29 Mar 2021 06:45:38,754 INFO : Starting import from 20191002 Brain samples.sky.zip
29 Mar 2021 06:45:38,757 INFO : Starting to import Skyline document from 20191002 Brain samples.sky.zip
29 Mar 2021 06:45:38,757 INFO : Expanding 20191002 Brain samples.skyd
29 Mar 2021 06:45:38,762 INFO : Expanding 20191002 Brain samples.sky.view
29 Mar 2021 06:45:38,763 INFO : Expanding 20191002 Brain samples.sky
29 Mar 2021 06:45:38,774 INFO : 6% Done
29 Mar 2021 06:45:38,776 DEBUG: Starting to load chromatogram headers
29 Mar 2021 06:45:38,776 DEBUG: Done loading chromatogram headers
29 Mar 2021 06:45:38,806 INFO : Inserting PIPs
29 Mar 2021 06:45:38,812 INFO : 20% Done
29 Mar 2021 06:45:38,842 INFO : 30% Done
29 Mar 2021 06:45:38,905 INFO : 38% Done
29 Mar 2021 06:45:39,006 INFO : 49% Done
29 Mar 2021 06:45:39,080 INFO : 61% Done
29 Mar 2021 06:45:39,133 INFO : 72% Done
29 Mar 2021 06:45:39,197 INFO : 82% Done
29 Mar 2021 06:45:39,250 INFO : 93% Done
29 Mar 2021 06:45:39,313 INFO : 98% Done
29 Mar 2021 06:45:39,376 DEBUG: Total molecules inserted: 11
29 Mar 2021 06:45:39,378 INFO : Done parsing Skyline document.
29 Mar 2021 06:45:39,381 INFO : Creating and populating temp tables for Proportion values
29 Mar 2021 06:45:39,425 INFO : Setting PrecursorModifiedAreaProportion values on precursorchrominfo
29 Mar 2021 06:45:39,513 INFO : Setting ModifiedAreaProportion values on generalmoleculechrominfo
29 Mar 2021 06:45:39,531 INFO : Cleaning up temp tables
29 Mar 2021 06:45:40,058 INFO : Completed import of Skyline document from 20191002 Brain samples.sky.zip
29 Mar 2021 06:45:40,066 INFO : 100% Done
29 Mar 2021 06:45:40,077 DEBUG: Finished trying to load data file file:///data/apache-tomcat/temp/Pipeline_temp/ISAS%20Protein%20Dynamics%20-%202021_Targeted_Lipidomics_PIPsIC-MS_Cheung_e3048364-72c1-1039-9674-3013bb9b91fd/_temp__2021-03-29_06-45-06/export/xar/experiments_and_runs.xar.exploded/Run104136/20191002%20Brain%20samples.sky.zip into the system
29 Mar 2021 06:45:40,077 DEBUG: Trying to load data file file:///data/apache-tomcat/temp/Pipeline_temp/ISAS%20Protein%20Dynamics%20-%202021_Targeted_Lipidomics_PIPsIC-MS_Cheung_e3048364-72c1-1039-9674-3013bb9b91fd/_temp__2021-03-29_06-45-06/export/xar/experiments_and_runs.xar.exploded/Run104136/20191002%20Brain%20samples/20191002%20Brain%20samples.skyd into the system
29 Mar 2021 06:45:40,078 DEBUG: Finished trying to load data file file:///data/apache-tomcat/temp/Pipeline_temp/ISAS%20Protein%20Dynamics%20-%202021_Targeted_Lipidomics_PIPsIC-MS_Cheung_e3048364-72c1-1039-9674-3013bb9b91fd/_temp__2021-03-29_06-45-06/export/xar/experiments_and_runs.xar.exploded/Run104136/20191002%20Brain%20samples/20191002%20Brain%20samples.skyd into the system
29 Mar 2021 06:45:40,079 DEBUG: Trying to load data file file:///data/apache-tomcat/temp/Pipeline_temp/ISAS%20Protein%20Dynamics%20-%202021_Targeted_Lipidomics_PIPsIC-MS_Cheung_e3048364-72c1-1039-9674-3013bb9b91fd/_temp__2021-03-29_06-45-06/export/xar/experiments_and_runs.xar.exploded/Run104135/20190929%20Extraction%20efficiency.sky.zip into the system
29 Mar 2021 06:45:40,082 INFO : Starting import from 20190929 Extraction efficiency.sky.zip
29 Mar 2021 06:45:40,089 INFO : Starting to import Skyline document from 20190929 Extraction efficiency.sky.zip
29 Mar 2021 06:45:40,096 INFO : Expanding 20190929 Extraction efficiency.skyd
29 Mar 2021 06:45:40,350 INFO : Expanding 20190929 Extraction efficiency.sky.view
29 Mar 2021 06:45:40,351 INFO : Expanding 20190929 Extraction efficiency.sky
29 Mar 2021 06:45:40,372 INFO : 8% Done
29 Mar 2021 06:45:40,381 DEBUG: Starting to load chromatogram headers
29 Mar 2021 06:45:40,382 DEBUG: Done loading chromatogram headers
29 Mar 2021 06:45:40,469 INFO : Inserting PIPs
29 Mar 2021 06:45:40,483 INFO : 19% Done
29 Mar 2021 06:45:40,649 INFO : 30% Done
29 Mar 2021 06:45:40,730 INFO : 40% Done
29 Mar 2021 06:45:40,807 INFO : 49% Done
29 Mar 2021 06:45:40,929 INFO : 61% Done
29 Mar 2021 06:45:41,180 INFO : 70% Done
29 Mar 2021 06:45:41,333 INFO : 72% Done
29 Mar 2021 06:45:41,357 INFO : 81% Done
29 Mar 2021 06:45:41,501 INFO : 93% Done
29 Mar 2021 06:45:41,597 INFO : 98% Done
29 Mar 2021 06:45:41,676 DEBUG: Total molecules inserted: 11
29 Mar 2021 06:45:41,678 INFO : Done parsing Skyline document.
29 Mar 2021 06:45:41,681 INFO : Creating and populating temp tables for Proportion values
29 Mar 2021 06:45:41,739 INFO : Setting PrecursorModifiedAreaProportion values on precursorchrominfo
29 Mar 2021 06:45:41,878 INFO : Setting ModifiedAreaProportion values on generalmoleculechrominfo
29 Mar 2021 06:45:41,918 INFO : Cleaning up temp tables
29 Mar 2021 06:45:42,477 INFO : Completed import of Skyline document from 20190929 Extraction efficiency.sky.zip
29 Mar 2021 06:45:42,486 INFO : 100% Done
29 Mar 2021 06:45:42,498 DEBUG: Finished trying to load data file file:///data/apache-tomcat/temp/Pipeline_temp/ISAS%20Protein%20Dynamics%20-%202021_Targeted_Lipidomics_PIPsIC-MS_Cheung_e3048364-72c1-1039-9674-3013bb9b91fd/_temp__2021-03-29_06-45-06/export/xar/experiments_and_runs.xar.exploded/Run104135/20190929%20Extraction%20efficiency.sky.zip into the system
29 Mar 2021 06:45:42,499 DEBUG: Trying to load data file file:///data/apache-tomcat/temp/Pipeline_temp/ISAS%20Protein%20Dynamics%20-%202021_Targeted_Lipidomics_PIPsIC-MS_Cheung_e3048364-72c1-1039-9674-3013bb9b91fd/_temp__2021-03-29_06-45-06/export/xar/experiments_and_runs.xar.exploded/Run104135/20190929%20Extraction%20efficiency/20190929%20Extraction%20efficiency.skyd into the system
29 Mar 2021 06:45:42,500 DEBUG: Finished trying to load data file file:///data/apache-tomcat/temp/Pipeline_temp/ISAS%20Protein%20Dynamics%20-%202021_Targeted_Lipidomics_PIPsIC-MS_Cheung_e3048364-72c1-1039-9674-3013bb9b91fd/_temp__2021-03-29_06-45-06/export/xar/experiments_and_runs.xar.exploded/Run104135/20190929%20Extraction%20efficiency/20190929%20Extraction%20efficiency.skyd into the system
29 Mar 2021 06:45:42,501 DEBUG: Trying to load data file file:///data/apache-tomcat/temp/Pipeline_temp/ISAS%20Protein%20Dynamics%20-%202021_Targeted_Lipidomics_PIPsIC-MS_Cheung_e3048364-72c1-1039-9674-3013bb9b91fd/_temp__2021-03-29_06-45-06/export/xar/experiments_and_runs.xar.exploded/Run103945/20190928%20Donor%206-7%20PIPs%20MRM%20190926.sky.zip into the system
29 Mar 2021 06:45:42,505 INFO : Starting import from 20190928 Donor 6-7 PIPs MRM 190926.sky.zip
29 Mar 2021 06:45:42,512 INFO : Starting to import Skyline document from 20190928 Donor 6-7 PIPs MRM 190926.sky.zip
29 Mar 2021 06:45:42,526 INFO : Expanding 20190928 Donor 6-7 PIPs MRM 190926.skyd
29 Mar 2021 06:45:43,036 INFO : Expanding 20190928 Donor 6-7 PIPs MRM 190926.sky.view
29 Mar 2021 06:45:43,037 INFO : Expanding 20190928 Donor 6-7 PIPs MRM 190926.sky
29 Mar 2021 06:45:43,063 INFO : 6% Done
29 Mar 2021 06:45:43,079 DEBUG: Starting to load chromatogram headers
29 Mar 2021 06:45:43,080 DEBUG: Done loading chromatogram headers
29 Mar 2021 06:45:43,212 INFO : 9% Done
29 Mar 2021 06:45:43,213 INFO : Inserting PIPs
29 Mar 2021 06:45:43,227 INFO : 19% Done
29 Mar 2021 06:45:43,329 INFO : 28% Done
29 Mar 2021 06:45:43,418 INFO : 39% Done
29 Mar 2021 06:45:43,506 INFO : 50% Done
29 Mar 2021 06:45:43,601 INFO : 61% Done
29 Mar 2021 06:45:43,690 INFO : 70% Done
29 Mar 2021 06:45:43,779 INFO : 71% Done
29 Mar 2021 06:45:43,796 INFO : 81% Done
29 Mar 2021 06:45:43,895 INFO : 92% Done
29 Mar 2021 06:45:43,988 INFO : 98% Done
29 Mar 2021 06:45:44,050 DEBUG: Total molecules inserted: 11
29 Mar 2021 06:45:44,052 INFO : Done parsing Skyline document.
29 Mar 2021 06:45:44,055 INFO : Creating and populating temp tables for Proportion values
29 Mar 2021 06:45:44,089 INFO : Setting PrecursorModifiedAreaProportion values on precursorchrominfo
29 Mar 2021 06:45:44,808 INFO : Setting ModifiedAreaProportion values on generalmoleculechrominfo
29 Mar 2021 06:45:44,848 INFO : Cleaning up temp tables
29 Mar 2021 06:45:45,429 INFO : Completed import of Skyline document from 20190928 Donor 6-7 PIPs MRM 190926.sky.zip
29 Mar 2021 06:45:45,442 INFO : 100% Done
29 Mar 2021 06:45:45,454 DEBUG: Finished trying to load data file file:///data/apache-tomcat/temp/Pipeline_temp/ISAS%20Protein%20Dynamics%20-%202021_Targeted_Lipidomics_PIPsIC-MS_Cheung_e3048364-72c1-1039-9674-3013bb9b91fd/_temp__2021-03-29_06-45-06/export/xar/experiments_and_runs.xar.exploded/Run103945/20190928%20Donor%206-7%20PIPs%20MRM%20190926.sky.zip into the system
29 Mar 2021 06:45:45,455 DEBUG: Trying to load data file file:///data/apache-tomcat/temp/Pipeline_temp/ISAS%20Protein%20Dynamics%20-%202021_Targeted_Lipidomics_PIPsIC-MS_Cheung_e3048364-72c1-1039-9674-3013bb9b91fd/_temp__2021-03-29_06-45-06/export/xar/experiments_and_runs.xar.exploded/Run103945/20190928%20Donor%206-7%20PIPs%20MRM%20190926/20190928%20Donor%206-7%20PIPs%20MRM%20190926.skyd into the system
29 Mar 2021 06:45:45,456 DEBUG: Finished trying to load data file file:///data/apache-tomcat/temp/Pipeline_temp/ISAS%20Protein%20Dynamics%20-%202021_Targeted_Lipidomics_PIPsIC-MS_Cheung_e3048364-72c1-1039-9674-3013bb9b91fd/_temp__2021-03-29_06-45-06/export/xar/experiments_and_runs.xar.exploded/Run103945/20190928%20Donor%206-7%20PIPs%20MRM%20190926/20190928%20Donor%206-7%20PIPs%20MRM%20190926.skyd into the system
29 Mar 2021 06:45:45,456 DEBUG: Trying to load data file file:///data/apache-tomcat/temp/Pipeline_temp/ISAS%20Protein%20Dynamics%20-%202021_Targeted_Lipidomics_PIPsIC-MS_Cheung_e3048364-72c1-1039-9674-3013bb9b91fd/_temp__2021-03-29_06-45-06/export/xar/experiments_and_runs.xar.exploded/Run103943/20190927%20PIP%20extraction%20efficiency.sky.zip into the system
29 Mar 2021 06:45:45,460 INFO : Starting import from 20190927 PIP extraction efficiency.sky.zip
29 Mar 2021 06:45:45,467 INFO : Starting to import Skyline document from 20190927 PIP extraction efficiency.sky.zip
29 Mar 2021 06:45:45,473 INFO : Expanding 20190927 PIP extraction efficiency.skyd
29 Mar 2021 06:45:45,718 INFO : Expanding 20190927 PIP extraction efficiency.sky.view
29 Mar 2021 06:45:45,718 INFO : Expanding 20190927 PIP extraction efficiency.sky
29 Mar 2021 06:45:45,742 INFO : 6% Done
29 Mar 2021 06:45:45,752 DEBUG: Starting to load chromatogram headers
29 Mar 2021 06:45:45,753 DEBUG: Done loading chromatogram headers
29 Mar 2021 06:45:45,846 INFO : Inserting PIPs
29 Mar 2021 06:45:45,861 INFO : 16% Done
29 Mar 2021 06:45:45,971 INFO : 25% Done
29 Mar 2021 06:45:46,048 INFO : 32% Done
29 Mar 2021 06:45:46,127 INFO : 43% Done
29 Mar 2021 06:45:46,580 INFO : 51% Done
29 Mar 2021 06:45:46,661 INFO : 60% Done
29 Mar 2021 06:45:46,744 INFO : 69% Done
29 Mar 2021 06:45:46,836 INFO : 76% Done
29 Mar 2021 06:45:46,929 INFO : 84% Done
29 Mar 2021 06:45:47,038 INFO : 92% Done
29 Mar 2021 06:45:47,135 INFO : 98% Done
29 Mar 2021 06:45:47,234 DEBUG: Total molecules inserted: 11
29 Mar 2021 06:45:47,236 INFO : Done parsing Skyline document.
29 Mar 2021 06:45:47,239 INFO : Creating and populating temp tables for Proportion values
29 Mar 2021 06:45:47,278 INFO : Setting PrecursorModifiedAreaProportion values on precursorchrominfo
29 Mar 2021 06:45:47,523 INFO : Setting ModifiedAreaProportion values on generalmoleculechrominfo
29 Mar 2021 06:45:47,572 INFO : Cleaning up temp tables
29 Mar 2021 06:45:48,171 INFO : Completed import of Skyline document from 20190927 PIP extraction efficiency.sky.zip
29 Mar 2021 06:45:48,180 INFO : 100% Done
29 Mar 2021 06:45:48,193 DEBUG: Finished trying to load data file file:///data/apache-tomcat/temp/Pipeline_temp/ISAS%20Protein%20Dynamics%20-%202021_Targeted_Lipidomics_PIPsIC-MS_Cheung_e3048364-72c1-1039-9674-3013bb9b91fd/_temp__2021-03-29_06-45-06/export/xar/experiments_and_runs.xar.exploded/Run103943/20190927%20PIP%20extraction%20efficiency.sky.zip into the system
29 Mar 2021 06:45:48,193 DEBUG: Trying to load data file file:///data/apache-tomcat/temp/Pipeline_temp/ISAS%20Protein%20Dynamics%20-%202021_Targeted_Lipidomics_PIPsIC-MS_Cheung_e3048364-72c1-1039-9674-3013bb9b91fd/_temp__2021-03-29_06-45-06/export/xar/experiments_and_runs.xar.exploded/Run103943/20190927%20PIP%20extraction%20efficiency/20190927%20PIP%20extraction%20efficiency.skyd into the system
29 Mar 2021 06:45:48,195 DEBUG: Finished trying to load data file file:///data/apache-tomcat/temp/Pipeline_temp/ISAS%20Protein%20Dynamics%20-%202021_Targeted_Lipidomics_PIPsIC-MS_Cheung_e3048364-72c1-1039-9674-3013bb9b91fd/_temp__2021-03-29_06-45-06/export/xar/experiments_and_runs.xar.exploded/Run103943/20190927%20PIP%20extraction%20efficiency/20190927%20PIP%20extraction%20efficiency.skyd into the system
29 Mar 2021 06:45:48,325 INFO : Done importing xar
29 Mar 2021 06:45:48,351 INFO : Loading pages and webpart properties
29 Mar 2021 06:45:48,607 INFO : Done importing pages and webpart properties
29 Mar 2021 06:45:48,607 INFO : 
29 Mar 2021 06:45:48,608 INFO : Experiment import completed successfully.
29 Mar 2021 06:45:48,608 INFO : Successfully completed task 'org.labkey.panoramapublic.pipeline.ExperimentImportTask'
29 Mar 2021 06:45:48,709 INFO : Starting to run task 'org.labkey.panoramapublic.pipeline.CopyExperimentFinalTask' at location 'webserver-high-priority'
29 Mar 2021 06:45:48,710 INFO : 
29 Mar 2021 06:45:48,710 INFO : Finishing up experiment copy.
29 Mar 2021 06:45:48,712 INFO : Creating a new TargetedMS experiment entry in panoramapublic.ExperimentAnnotations.
29 Mar 2021 06:45:48,784 INFO : Updating access URL to point to the new copy of the data.
29 Mar 2021 06:45:49,006 INFO : Setting the 'copied' timestamp and journalExperimentId on the JournalExperiment table.
29 Mar 2021 06:45:49,010 INFO : Removing copy permissions given to journal.
29 Mar 2021 06:45:49,148 INFO : Adding read permissions to all users that are folder admins in the source container.
29 Mar 2021 06:45:49,191 INFO : Setting the TargetedMS folder type to 'Experimental Data'
29 Mar 2021 06:45:49,214 INFO : Updating the 'Raw Data' tab configuration
29 Mar 2021 06:45:49,223 INFO : Updating dataFileUrls for run 20190927 PIP extraction efficiency.sky.zip; targetedms run ID 106791
29 Mar 2021 06:45:49,224 INFO : Updating dataFileUrl...
29 Mar 2021 06:45:49,224 INFO : from: file:///data/apache-tomcat/temp/Pipeline_temp/ISAS%20Protein%20Dynamics%20-%202021_Targeted_Lipidomics_PIPsIC-MS_Cheung_e3048364-72c1-1039-9674-3013bb9b91fd/_temp__2021-03-29_06-45-06/export/xar/experiments_and_runs.xar.exploded/Run103943/20190927%20PIP%20extraction%20efficiency/20190927%20PIP%20extraction%20efficiency.skyd
29 Mar 2021 06:45:49,225 INFO : to: file:///data/labkey/files/Panorama%20Public/2021/ISAS%20Protein%20Dynamics%20-%202021_Targeted_Lipidomics_PIPsIC-MS_Cheung/@files/20190927%20PIP%20extraction%20efficiency/20190927%20PIP%20extraction%20efficiency.skyd
29 Mar 2021 06:45:49,233 INFO : Updating dataFileUrl...
29 Mar 2021 06:45:49,233 INFO : from: file:///data/apache-tomcat/temp/Pipeline_temp/ISAS%20Protein%20Dynamics%20-%202021_Targeted_Lipidomics_PIPsIC-MS_Cheung_e3048364-72c1-1039-9674-3013bb9b91fd/_temp__2021-03-29_06-45-06/export/xar/experiments_and_runs.xar.exploded/Run103943/20190927%20PIP%20extraction%20efficiency.sky.zip
29 Mar 2021 06:45:49,233 INFO : to: file:///data/labkey/files/Panorama%20Public/2021/ISAS%20Protein%20Dynamics%20-%202021_Targeted_Lipidomics_PIPsIC-MS_Cheung/@files/20190927%20PIP%20extraction%20efficiency.sky.zip
29 Mar 2021 06:45:49,246 INFO : Updating dataFileUrls for run 20190928 Donor 6-7 PIPs MRM 190926.sky.zip; targetedms run ID 106790
29 Mar 2021 06:45:49,247 INFO : Updating dataFileUrl...
29 Mar 2021 06:45:49,247 INFO : from: file:///data/apache-tomcat/temp/Pipeline_temp/ISAS%20Protein%20Dynamics%20-%202021_Targeted_Lipidomics_PIPsIC-MS_Cheung_e3048364-72c1-1039-9674-3013bb9b91fd/_temp__2021-03-29_06-45-06/export/xar/experiments_and_runs.xar.exploded/Run103945/20190928%20Donor%206-7%20PIPs%20MRM%20190926/20190928%20Donor%206-7%20PIPs%20MRM%20190926.skyd
29 Mar 2021 06:45:49,248 INFO : to: file:///data/labkey/files/Panorama%20Public/2021/ISAS%20Protein%20Dynamics%20-%202021_Targeted_Lipidomics_PIPsIC-MS_Cheung/@files/20190928%20Donor%206-7%20PIPs%20MRM%20190926/20190928%20Donor%206-7%20PIPs%20MRM%20190926.skyd
29 Mar 2021 06:45:49,253 INFO : Updating dataFileUrl...
29 Mar 2021 06:45:49,253 INFO : from: file:///data/apache-tomcat/temp/Pipeline_temp/ISAS%20Protein%20Dynamics%20-%202021_Targeted_Lipidomics_PIPsIC-MS_Cheung_e3048364-72c1-1039-9674-3013bb9b91fd/_temp__2021-03-29_06-45-06/export/xar/experiments_and_runs.xar.exploded/Run103945/20190928%20Donor%206-7%20PIPs%20MRM%20190926.sky.zip
29 Mar 2021 06:45:49,254 INFO : to: file:///data/labkey/files/Panorama%20Public/2021/ISAS%20Protein%20Dynamics%20-%202021_Targeted_Lipidomics_PIPsIC-MS_Cheung/@files/20190928%20Donor%206-7%20PIPs%20MRM%20190926.sky.zip
29 Mar 2021 06:45:49,264 INFO : Updating dataFileUrls for run 20190929 Extraction efficiency.sky.zip; targetedms run ID 106789
29 Mar 2021 06:45:49,265 INFO : Updating dataFileUrl...
29 Mar 2021 06:45:49,265 INFO : from: file:///data/apache-tomcat/temp/Pipeline_temp/ISAS%20Protein%20Dynamics%20-%202021_Targeted_Lipidomics_PIPsIC-MS_Cheung_e3048364-72c1-1039-9674-3013bb9b91fd/_temp__2021-03-29_06-45-06/export/xar/experiments_and_runs.xar.exploded/Run104135/20190929%20Extraction%20efficiency.sky.zip
29 Mar 2021 06:45:49,265 INFO : to: file:///data/labkey/files/Panorama%20Public/2021/ISAS%20Protein%20Dynamics%20-%202021_Targeted_Lipidomics_PIPsIC-MS_Cheung/@files/20190929%20Extraction%20efficiency.sky.zip
29 Mar 2021 06:45:49,271 INFO : Updating dataFileUrl...
29 Mar 2021 06:45:49,271 INFO : from: file:///data/apache-tomcat/temp/Pipeline_temp/ISAS%20Protein%20Dynamics%20-%202021_Targeted_Lipidomics_PIPsIC-MS_Cheung_e3048364-72c1-1039-9674-3013bb9b91fd/_temp__2021-03-29_06-45-06/export/xar/experiments_and_runs.xar.exploded/Run104135/20190929%20Extraction%20efficiency/20190929%20Extraction%20efficiency.skyd
29 Mar 2021 06:45:49,272 INFO : to: file:///data/labkey/files/Panorama%20Public/2021/ISAS%20Protein%20Dynamics%20-%202021_Targeted_Lipidomics_PIPsIC-MS_Cheung/@files/20190929%20Extraction%20efficiency/20190929%20Extraction%20efficiency.skyd
29 Mar 2021 06:45:49,281 INFO : Updating dataFileUrls for run 20191002 Brain samples.sky.zip; targetedms run ID 106788
29 Mar 2021 06:45:49,282 INFO : Updating dataFileUrl...
29 Mar 2021 06:45:49,282 INFO : from: file:///data/apache-tomcat/temp/Pipeline_temp/ISAS%20Protein%20Dynamics%20-%202021_Targeted_Lipidomics_PIPsIC-MS_Cheung_e3048364-72c1-1039-9674-3013bb9b91fd/_temp__2021-03-29_06-45-06/export/xar/experiments_and_runs.xar.exploded/Run104136/20191002%20Brain%20samples/20191002%20Brain%20samples.skyd
29 Mar 2021 06:45:49,283 INFO : to: file:///data/labkey/files/Panorama%20Public/2021/ISAS%20Protein%20Dynamics%20-%202021_Targeted_Lipidomics_PIPsIC-MS_Cheung/@files/20191002%20Brain%20samples/20191002%20Brain%20samples.skyd
29 Mar 2021 06:45:49,288 INFO : Updating dataFileUrl...
29 Mar 2021 06:45:49,288 INFO : from: file:///data/apache-tomcat/temp/Pipeline_temp/ISAS%20Protein%20Dynamics%20-%202021_Targeted_Lipidomics_PIPsIC-MS_Cheung_e3048364-72c1-1039-9674-3013bb9b91fd/_temp__2021-03-29_06-45-06/export/xar/experiments_and_runs.xar.exploded/Run104136/20191002%20Brain%20samples.sky.zip
29 Mar 2021 06:45:49,288 INFO : to: file:///data/labkey/files/Panorama%20Public/2021/ISAS%20Protein%20Dynamics%20-%202021_Targeted_Lipidomics_PIPsIC-MS_Cheung/@files/20191002%20Brain%20samples.sky.zip
29 Mar 2021 06:45:49,299 INFO : Updating dataFileUrls for run 20191003 Donor 6-7 + calibration curve.sky.zip; targetedms run ID 106787
29 Mar 2021 06:45:49,299 INFO : Updating dataFileUrl...
29 Mar 2021 06:45:49,300 INFO : from: file:///data/apache-tomcat/temp/Pipeline_temp/ISAS%20Protein%20Dynamics%20-%202021_Targeted_Lipidomics_PIPsIC-MS_Cheung_e3048364-72c1-1039-9674-3013bb9b91fd/_temp__2021-03-29_06-45-06/export/xar/experiments_and_runs.xar.exploded/Run104137/20191003%20Donor%206-7%20+%20calibration%20curve/20191003%20Donor%206-7%20+%20calibration%20curve.skyd
29 Mar 2021 06:45:49,300 INFO : to: file:///data/labkey/files/Panorama%20Public/2021/ISAS%20Protein%20Dynamics%20-%202021_Targeted_Lipidomics_PIPsIC-MS_Cheung/@files/20191003%20Donor%206-7%20+%20calibration%20curve/20191003%20Donor%206-7%20+%20calibration%20curve.skyd
29 Mar 2021 06:45:49,306 INFO : Updating dataFileUrl...
29 Mar 2021 06:45:49,306 INFO : from: file:///data/apache-tomcat/temp/Pipeline_temp/ISAS%20Protein%20Dynamics%20-%202021_Targeted_Lipidomics_PIPsIC-MS_Cheung_e3048364-72c1-1039-9674-3013bb9b91fd/_temp__2021-03-29_06-45-06/export/xar/experiments_and_runs.xar.exploded/Run104137/20191003%20Donor%206-7%20+%20calibration%20curve.sky.zip
29 Mar 2021 06:45:49,307 INFO : to: file:///data/labkey/files/Panorama%20Public/2021/ISAS%20Protein%20Dynamics%20-%202021_Targeted_Lipidomics_PIPsIC-MS_Cheung/@files/20191003%20Donor%206-7%20+%20calibration%20curve.sky.zip
29 Mar 2021 06:45:49,318 INFO : Updating dataFileUrls for run 20191105 Calibration curve.sky.zip; targetedms run ID 106786
29 Mar 2021 06:45:49,318 INFO : Updating dataFileUrl...
29 Mar 2021 06:45:49,319 INFO : from: file:///data/apache-tomcat/temp/Pipeline_temp/ISAS%20Protein%20Dynamics%20-%202021_Targeted_Lipidomics_PIPsIC-MS_Cheung_e3048364-72c1-1039-9674-3013bb9b91fd/_temp__2021-03-29_06-45-06/export/xar/experiments_and_runs.xar.exploded/Run104138/20191105%20Calibration%20curve/20191105%20Calibration%20curve.skyd
29 Mar 2021 06:45:49,319 INFO : to: file:///data/labkey/files/Panorama%20Public/2021/ISAS%20Protein%20Dynamics%20-%202021_Targeted_Lipidomics_PIPsIC-MS_Cheung/@files/20191105%20Calibration%20curve/20191105%20Calibration%20curve.skyd
29 Mar 2021 06:45:49,325 INFO : Updating dataFileUrl...
29 Mar 2021 06:45:49,325 INFO : from: file:///data/apache-tomcat/temp/Pipeline_temp/ISAS%20Protein%20Dynamics%20-%202021_Targeted_Lipidomics_PIPsIC-MS_Cheung_e3048364-72c1-1039-9674-3013bb9b91fd/_temp__2021-03-29_06-45-06/export/xar/experiments_and_runs.xar.exploded/Run104138/20191105%20Calibration%20curve.sky.zip
29 Mar 2021 06:45:49,326 INFO : to: file:///data/labkey/files/Panorama%20Public/2021/ISAS%20Protein%20Dynamics%20-%202021_Targeted_Lipidomics_PIPsIC-MS_Cheung/@files/20191105%20Calibration%20curve.sky.zip
29 Mar 2021 06:45:49,336 INFO : Updating dataFileUrls for run 20191108 Gradient.sky.zip; targetedms run ID 106785
29 Mar 2021 06:45:49,337 INFO : Updating dataFileUrl...
29 Mar 2021 06:45:49,337 INFO : from: file:///data/apache-tomcat/temp/Pipeline_temp/ISAS%20Protein%20Dynamics%20-%202021_Targeted_Lipidomics_PIPsIC-MS_Cheung_e3048364-72c1-1039-9674-3013bb9b91fd/_temp__2021-03-29_06-45-06/export/xar/experiments_and_runs.xar.exploded/Run104139/20191108%20Gradient/20191108%20Gradient.skyd
29 Mar 2021 06:45:49,338 INFO : to: file:///data/labkey/files/Panorama%20Public/2021/ISAS%20Protein%20Dynamics%20-%202021_Targeted_Lipidomics_PIPsIC-MS_Cheung/@files/20191108%20Gradient/20191108%20Gradient.skyd
29 Mar 2021 06:45:49,344 INFO : Updating dataFileUrl...
29 Mar 2021 06:45:49,344 INFO : from: file:///data/apache-tomcat/temp/Pipeline_temp/ISAS%20Protein%20Dynamics%20-%202021_Targeted_Lipidomics_PIPsIC-MS_Cheung_e3048364-72c1-1039-9674-3013bb9b91fd/_temp__2021-03-29_06-45-06/export/xar/experiments_and_runs.xar.exploded/Run104139/20191108%20Gradient.sky.zip
29 Mar 2021 06:45:49,344 INFO : to: file:///data/labkey/files/Panorama%20Public/2021/ISAS%20Protein%20Dynamics%20-%202021_Targeted_Lipidomics_PIPsIC-MS_Cheung/@files/20191108%20Gradient.sky.zip
29 Mar 2021 06:45:49,355 INFO : Updating dataFileUrls for run D2 15 CRP.sky.zip; targetedms run ID 106784
29 Mar 2021 06:45:49,356 INFO : Updating dataFileUrl...
29 Mar 2021 06:45:49,356 INFO : from: file:///data/apache-tomcat/temp/Pipeline_temp/ISAS%20Protein%20Dynamics%20-%202021_Targeted_Lipidomics_PIPsIC-MS_Cheung_e3048364-72c1-1039-9674-3013bb9b91fd/_temp__2021-03-29_06-45-06/export/xar/experiments_and_runs.xar.exploded/Run104141/D2%2015%20CRP/D2%2015%20CRP.skyd
29 Mar 2021 06:45:49,357 INFO : to: file:///data/labkey/files/Panorama%20Public/2021/ISAS%20Protein%20Dynamics%20-%202021_Targeted_Lipidomics_PIPsIC-MS_Cheung/@files/D2%2015%20CRP/D2%2015%20CRP.skyd
29 Mar 2021 06:45:49,362 INFO : Updating dataFileUrl...
29 Mar 2021 06:45:49,363 INFO : from: file:///data/apache-tomcat/temp/Pipeline_temp/ISAS%20Protein%20Dynamics%20-%202021_Targeted_Lipidomics_PIPsIC-MS_Cheung_e3048364-72c1-1039-9674-3013bb9b91fd/_temp__2021-03-29_06-45-06/export/xar/experiments_and_runs.xar.exploded/Run104141/D2%2015%20CRP.sky.zip
29 Mar 2021 06:45:49,363 INFO : to: file:///data/labkey/files/Panorama%20Public/2021/ISAS%20Protein%20Dynamics%20-%202021_Targeted_Lipidomics_PIPsIC-MS_Cheung/@files/D2%2015%20CRP.sky.zip
29 Mar 2021 06:45:49,374 INFO : Updating dataFileUrls for run 20191114 Extraction efficiency.sky.zip; targetedms run ID 106783
29 Mar 2021 06:45:49,374 INFO : Updating dataFileUrl...
29 Mar 2021 06:45:49,375 INFO : from: file:///data/apache-tomcat/temp/Pipeline_temp/ISAS%20Protein%20Dynamics%20-%202021_Targeted_Lipidomics_PIPsIC-MS_Cheung_e3048364-72c1-1039-9674-3013bb9b91fd/_temp__2021-03-29_06-45-06/export/xar/experiments_and_runs.xar.exploded/Run104140/20191114%20Extraction%20efficiency/20191114%20Extraction%20efficiency.skyd
29 Mar 2021 06:45:49,375 INFO : to: file:///data/labkey/files/Panorama%20Public/2021/ISAS%20Protein%20Dynamics%20-%202021_Targeted_Lipidomics_PIPsIC-MS_Cheung/@files/20191114%20Extraction%20efficiency/20191114%20Extraction%20efficiency.skyd
29 Mar 2021 06:45:49,381 INFO : Updating dataFileUrl...
29 Mar 2021 06:45:49,381 INFO : from: file:///data/apache-tomcat/temp/Pipeline_temp/ISAS%20Protein%20Dynamics%20-%202021_Targeted_Lipidomics_PIPsIC-MS_Cheung_e3048364-72c1-1039-9674-3013bb9b91fd/_temp__2021-03-29_06-45-06/export/xar/experiments_and_runs.xar.exploded/Run104140/20191114%20Extraction%20efficiency.sky.zip
29 Mar 2021 06:45:49,381 INFO : to: file:///data/labkey/files/Panorama%20Public/2021/ISAS%20Protein%20Dynamics%20-%202021_Targeted_Lipidomics_PIPsIC-MS_Cheung/@files/20191114%20Extraction%20efficiency.sky.zip
29 Mar 2021 06:45:49,392 INFO : Updating dataFileUrls for run PIPs MRM 191001 Donor 45.sky.zip; targetedms run ID 106782
29 Mar 2021 06:45:49,392 INFO : Updating dataFileUrl...
29 Mar 2021 06:45:49,392 INFO : from: file:///data/apache-tomcat/temp/Pipeline_temp/ISAS%20Protein%20Dynamics%20-%202021_Targeted_Lipidomics_PIPsIC-MS_Cheung_e3048364-72c1-1039-9674-3013bb9b91fd/_temp__2021-03-29_06-45-06/export/xar/experiments_and_runs.xar.exploded/Run104143/PIPs%20MRM%20191001%20Donor%2045.sky.zip
29 Mar 2021 06:45:49,393 INFO : to: file:///data/labkey/files/Panorama%20Public/2021/ISAS%20Protein%20Dynamics%20-%202021_Targeted_Lipidomics_PIPsIC-MS_Cheung/@files/PIPs%20MRM%20191001%20Donor%2045.sky.zip
29 Mar 2021 06:45:49,398 INFO : Updating dataFileUrl...
29 Mar 2021 06:45:49,398 INFO : from: file:///data/apache-tomcat/temp/Pipeline_temp/ISAS%20Protein%20Dynamics%20-%202021_Targeted_Lipidomics_PIPsIC-MS_Cheung_e3048364-72c1-1039-9674-3013bb9b91fd/_temp__2021-03-29_06-45-06/export/xar/experiments_and_runs.xar.exploded/Run104143/PIPs%20MRM%20191001%20Donor%2045/PIPs%20MRM%20191001%20Donor%2045.skyd
29 Mar 2021 06:45:49,399 INFO : to: file:///data/labkey/files/Panorama%20Public/2021/ISAS%20Protein%20Dynamics%20-%202021_Targeted_Lipidomics_PIPsIC-MS_Cheung/@files/PIPs%20MRM%20191001%20Donor%2045/PIPs%20MRM%20191001%20Donor%2045.skyd
29 Mar 2021 06:45:49,408 INFO : Updating dataFileUrls for run PIPs MRM 190930 OP9.sky.zip; targetedms run ID 106781
29 Mar 2021 06:45:49,409 INFO : Updating dataFileUrl...
29 Mar 2021 06:45:49,409 INFO : from: file:///data/apache-tomcat/temp/Pipeline_temp/ISAS%20Protein%20Dynamics%20-%202021_Targeted_Lipidomics_PIPsIC-MS_Cheung_e3048364-72c1-1039-9674-3013bb9b91fd/_temp__2021-03-29_06-45-06/export/xar/experiments_and_runs.xar.exploded/Run104142/PIPs%20MRM%20190930%20OP9/PIPs%20MRM%20190930%20OP9.skyd
29 Mar 2021 06:45:49,410 INFO : to: file:///data/labkey/files/Panorama%20Public/2021/ISAS%20Protein%20Dynamics%20-%202021_Targeted_Lipidomics_PIPsIC-MS_Cheung/@files/PIPs%20MRM%20190930%20OP9/PIPs%20MRM%20190930%20OP9.skyd
29 Mar 2021 06:45:49,415 INFO : Updating dataFileUrl...
29 Mar 2021 06:45:49,415 INFO : from: file:///data/apache-tomcat/temp/Pipeline_temp/ISAS%20Protein%20Dynamics%20-%202021_Targeted_Lipidomics_PIPsIC-MS_Cheung_e3048364-72c1-1039-9674-3013bb9b91fd/_temp__2021-03-29_06-45-06/export/xar/experiments_and_runs.xar.exploded/Run104142/PIPs%20MRM%20190930%20OP9.sky.zip
29 Mar 2021 06:45:49,415 INFO : to: file:///data/labkey/files/Panorama%20Public/2021/ISAS%20Protein%20Dynamics%20-%202021_Targeted_Lipidomics_PIPsIC-MS_Cheung/@files/PIPs%20MRM%20190930%20OP9.sky.zip
29 Mar 2021 06:45:49,422 INFO : Creating a reviewer account.
29 Mar 2021 06:45:50,097 INFO : Created reviewer with email: User panorama+reviewer18@proteinms.net
29 Mar 2021 06:45:50,111 INFO : Hiding the Data Pipeline tab.
29 Mar 2021 06:45:50,521 INFO : Emailing submitter.
29 Mar 2021 06:45:51,117 INFO : Successfully completed task 'org.labkey.panoramapublic.pipeline.CopyExperimentFinalTask'