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Validating data for experiment Id: 1212, validation Id: 393

IIT Bombay Proteomics - MRM_Rohu_Peptide_Atlas_Validation

Job Status

Created: 2023-03-22 14:26:22
Modified: 2023-03-22 14:26:23
Email: vsharma@uw.edu
Status: COMPLETE
Info:
Description: Validating data for experiment Id: 1212, validation Id: 393
File Path: /data/labkey/files/Panorama Public/2021/IIT Bombay Proteomics - MRM_Rohu_Peptide_Atlas_Validation/@files/Experiment_Validation_1281_2023-03-22_14-26-21.log
Files: Experiment_Validation_1281_2023-03-22_14-26-21.log
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Log File


22 Mar 2023 14:26:21,944 INFO : Validating data for a ProteomeXchange submission.
22 Mar 2023 14:26:22,388 INFO : =======================================
22 Mar 2023 14:26:22,443 INFO : Starting to run task 'org.labkey.panoramapublic.pipeline.PxDataValidationTask' at location 'webserver'
22 Mar 2023 14:26:22,444 INFO : Validating data for experiment Id: 1212, validation Id: 393
22 Mar 2023 14:26:22,467 INFO : Validating data for 1 Skyline documents in 1 folders
22 Mar 2023 14:26:22,477 INFO : Sample file validation for Skyline document: 18052021_Mehar_Data_des_MRM_List1_analysed_2021-05-28_14-57-40.sky.zip
22 Mar 2023 14:26:22,477 INFO :   Found all sample files.
22 Mar 2023 14:26:22,584 INFO : Modifications validation:
22 Mar 2023 14:26:22,585 INFO : VALID MODIFICATIONS:
22 Mar 2023 14:26:22,585 INFO : 4183: Carbamidomethyl (C): UNIMOD:4 - Carbamidomethyl
22 Mar 2023 14:26:22,585 INFO :     18052021_Mehar_Data_des_MRM_List1_analysed_2021-05-28_14-57-40.sky.zip
22 Mar 2023 14:26:22,585 INFO : INVALID MODIFICATIONS (No Unimod ID):
22 Mar 2023 14:26:22,587 INFO : Validating spectral library: Female_G_TPP.blib
22 Mar 2023 14:26:23,107 INFO : 'Female_G_TPP' (Female_G_TPP.blib) library in 1 Skyline documents was built with 18 raw files; 18 peptide Id files. Status: Missing spectrum and peptide Id  files.
22 Mar 2023 14:26:23,107 INFO :   MISSING FILES:
22 Mar 2023 14:26:23,108 INFO :     Spectrum File: 05042019_Mehar_2038_Ingel_Female_gonad_pH_8_Fr1.mzML
22 Mar 2023 14:26:23,108 INFO :     Spectrum File: 05042019_Mehar_2038_Ingel_Female_gonad_pH_8_Fr2.mzML
22 Mar 2023 14:26:23,108 INFO :     Spectrum File: 05042019_Mehar_2038_Ingel_Female_gonad_pH_8_Fr3.mzML
22 Mar 2023 14:26:23,108 INFO :     Spectrum File: 05042019_Mehar_2038_Ingel_Female_gonad_pH_8_Fr4.mzML
22 Mar 2023 14:26:23,108 INFO :     Spectrum File: 05042019_Mehar_2038_Ingel_Female_gonad_pH_8_Fr5.mzML
22 Mar 2023 14:26:23,108 INFO :     Spectrum File: 05042019_Mehar_2038_Ingel_Female_gonad_pH_8_Fr6.mzML
22 Mar 2023 14:26:23,108 INFO :     Spectrum File: 09042019_Mehar_2038_Ingel_Female_gonad_pH_2_5_Fr1.mzML
22 Mar 2023 14:26:23,108 INFO :     Spectrum File: 09042019_Mehar_2038_Ingel_Female_gonad_pH_2_5_Fr2.mzML
22 Mar 2023 14:26:23,108 INFO :     Spectrum File: 09042019_Mehar_2038_Ingel_Female_gonad_pH_2_5_Fr3.mzML
22 Mar 2023 14:26:23,108 INFO :     Spectrum File: 09042019_Mehar_2038_Ingel_Female_gonad_pH_2_5_Fr4.mzML
22 Mar 2023 14:26:23,108 INFO :     Spectrum File: 09042019_Mehar_2038_Ingel_Female_gonad_pH_2_5_Fr5.mzML
22 Mar 2023 14:26:23,108 INFO :     Spectrum File: 09042019_Mehar_2038_Ingel_Female_gonad_pH_2_5_Fr6.mzML
22 Mar 2023 14:26:23,108 INFO :     Spectrum File: 10042019_Mehar_2038_Ingel_Female_gonad_pH_13_Fr1.mzML
22 Mar 2023 14:26:23,108 INFO :     Spectrum File: 10042019_Mehar_2038_Ingel_Female_gonad_pH_13_Fr3.mzML
22 Mar 2023 14:26:23,108 INFO :     Spectrum File: 10042019_Mehar_2038_Ingel_Female_gonad_pH_13_Fr4.mzML
22 Mar 2023 14:26:23,108 INFO :     Spectrum File: 10042019_Mehar_2038_Ingel_Female_gonad_pH_13_Fr5.mzML
22 Mar 2023 14:26:23,108 INFO :     Spectrum File: 11042019_Mehar_2038_Ingel_Female_gonad_pH_13_Fr2.mzML
22 Mar 2023 14:26:23,108 INFO :     Spectrum File: 11042019_Mehar_2038_Ingel_Female_gonad_pH_13_Fr6.mzML
22 Mar 2023 14:26:23,108 INFO :     Peptide Id File: 05042019_Mehar_2038_Ingel_Female_gonad_pH_8_Fr1.pep.xml
22 Mar 2023 14:26:23,108 INFO :     Peptide Id File: 05042019_Mehar_2038_Ingel_Female_gonad_pH_8_Fr2.pep.xml
22 Mar 2023 14:26:23,108 INFO :     Peptide Id File: 05042019_Mehar_2038_Ingel_Female_gonad_pH_8_Fr3.pep.xml
22 Mar 2023 14:26:23,108 INFO :     Peptide Id File: 05042019_Mehar_2038_Ingel_Female_gonad_pH_8_Fr4.pep.xml
22 Mar 2023 14:26:23,108 INFO :     Peptide Id File: 05042019_Mehar_2038_Ingel_Female_gonad_pH_8_Fr5.pep.xml
22 Mar 2023 14:26:23,108 INFO :     Peptide Id File: 05042019_Mehar_2038_Ingel_Female_gonad_pH_8_Fr6.pep.xml
22 Mar 2023 14:26:23,110 INFO :     Peptide Id File: 09042019_Mehar_2038_Ingel_Female_gonad_pH_2_5_Fr1.pep.xml
22 Mar 2023 14:26:23,110 INFO :     Peptide Id File: 09042019_Mehar_2038_Ingel_Female_gonad_pH_2_5_Fr2.pep.xml
22 Mar 2023 14:26:23,110 INFO :     Peptide Id File: 09042019_Mehar_2038_Ingel_Female_gonad_pH_2_5_Fr3.pep.xml
22 Mar 2023 14:26:23,110 INFO :     Peptide Id File: 09042019_Mehar_2038_Ingel_Female_gonad_pH_2_5_Fr4.pep.xml
22 Mar 2023 14:26:23,110 INFO :     Peptide Id File: 09042019_Mehar_2038_Ingel_Female_gonad_pH_2_5_Fr5.pep.xml
22 Mar 2023 14:26:23,110 INFO :     Peptide Id File: 09042019_Mehar_2038_Ingel_Female_gonad_pH_2_5_Fr6.pep.xml
22 Mar 2023 14:26:23,110 INFO :     Peptide Id File: 10042019_Mehar_2038_Ingel_Female_gonad_pH_13_Fr1.pep.xml
22 Mar 2023 14:26:23,110 INFO :     Peptide Id File: 10042019_Mehar_2038_Ingel_Female_gonad_pH_13_Fr3.pep.xml
22 Mar 2023 14:26:23,110 INFO :     Peptide Id File: 10042019_Mehar_2038_Ingel_Female_gonad_pH_13_Fr4.pep.xml
22 Mar 2023 14:26:23,110 INFO :     Peptide Id File: 10042019_Mehar_2038_Ingel_Female_gonad_pH_13_Fr5.pep.xml
22 Mar 2023 14:26:23,110 INFO :     Peptide Id File: 11042019_Mehar_2038_Ingel_Female_gonad_pH_13_Fr2.pep.xml
22 Mar 2023 14:26:23,110 INFO :     Peptide Id File: 11042019_Mehar_2038_Ingel_Female_gonad_pH_13_Fr6.pep.xml
22 Mar 2023 14:26:23,110 INFO : Spectral library validation complete.
22 Mar 2023 14:26:23,111 INFO : Data validation is complete. Status is IncompleteMetadata
22 Mar 2023 14:26:23,111 INFO : Successfully completed task 'org.labkey.panoramapublic.pipeline.PxDataValidationTask'