06 Jan 2020 21:35:07,709 INFO : Copying experiment "Mass Spectrometry-GUided Immunoassay DEvelopment (MS-GUIDE)" from folder /Wollscheid/MSGUIDE to /Panorama Public/2020/Wollscheid - MSGUIDE
06 Jan 2020 21:35:07,709 INFO : =======================================
06 Jan 2020 21:35:07,865 INFO : Starting to run task 'org.labkey.panoramapublic.pipeline.ExperimentExportTask' at location 'webserver-high-priority'
06 Jan 2020 21:35:07,865 INFO :
06 Jan 2020 21:35:07,865 INFO : Exporting experiment.
06 Jan 2020 21:41:50,503 INFO :
06 Jan 2020 21:41:50,503 INFO : Experiment export completed successfully.
06 Jan 2020 21:41:50,503 INFO : Successfully completed task 'org.labkey.panoramapublic.pipeline.ExperimentExportTask'
06 Jan 2020 21:41:50,581 INFO : Starting to run task 'org.labkey.panoramapublic.pipeline.ExperimentImportTask' at location 'webserver-high-priority'
06 Jan 2020 21:41:50,582 INFO :
06 Jan 2020 21:41:50,582 INFO : Importing experiment.
06 Jan 2020 21:41:50,608 INFO : Loading folder properties (folder type, settings and active modules)
06 Jan 2020 21:41:50,841 INFO : Done importing folder properties (folder type, settings and active modules)
06 Jan 2020 21:41:50,845 INFO : Loading etl definitions
06 Jan 2020 21:41:50,847 INFO : Loading wikis
06 Jan 2020 21:41:50,865 INFO : 0 wikis imported
06 Jan 2020 21:41:50,866 INFO : Done importing wikis
06 Jan 2020 21:47:32,122 INFO : Loading xar
06 Jan 2020 21:47:41,036 DEBUG: Finished loading Protocol with LSID 'urn:lsid:uw.edu:Protocol.Folder-6336:TargetedMS.ImportSkyZip'
06 Jan 2020 21:47:41,041 DEBUG: Finished loading Protocol with LSID 'urn:lsid:uw.edu:Protocol.Folder-6336:TargetedMS.ImportSkyZip.Core'
06 Jan 2020 21:47:41,047 DEBUG: Finished loading Protocol with LSID 'urn:lsid:uw.edu:Protocol.Folder-6336:TargetedMS.ImportSkyZip.Output'
06 Jan 2020 21:47:41,047 DEBUG: Protocol import complete
06 Jan 2020 21:47:41,097 DEBUG: Finished loading Experiment with LSID 'urn:lsid:uw.edu:Experiment.Folder-6336:MS-GUIDE'
06 Jan 2020 21:47:41,097 DEBUG: Experiment/Run group import complete
06 Jan 2020 21:47:41,146 DEBUG: Protocol action set import complete
06 Jan 2020 21:47:41,208 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-6336:TargetedMS.ImportSkyZip'
06 Jan 2020 21:47:41,305 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:UploadedFile.Folder-6336:b086eac9-04aa-1038-baec-3013bb9b17af'
06 Jan 2020 21:47:41,317 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:skyd.Folder-6336:b086ec0e-04aa-1038-baec-3013bb9b17af'
06 Jan 2020 21:47:41,317 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-6336:TargetedMS.ImportSkyZip.Core'
06 Jan 2020 21:47:41,325 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-6336:TargetedMS.ImportSkyZip.Output'
06 Jan 2020 21:47:41,326 DEBUG: Finished loading ExperimentRun with LSID 'urn:lsid:uw.edu:Run.Folder-6336:b086ec85-04aa-1038-baec-3013bb9b17af'
06 Jan 2020 21:47:41,348 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-6336:TargetedMS.ImportSkyZip'
06 Jan 2020 21:47:41,384 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:UploadedFile.Folder-6336:86c5dd14-048d-1038-baec-3013bb9b17af'
06 Jan 2020 21:47:41,408 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:skyd.Folder-6336:3d3850f6-04a6-1038-baec-3013bb9b17af'
06 Jan 2020 21:47:41,409 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-6336:TargetedMS.ImportSkyZip.Core'
06 Jan 2020 21:47:41,415 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-6336:TargetedMS.ImportSkyZip.Output'
06 Jan 2020 21:47:41,417 DEBUG: Finished loading ExperimentRun with LSID 'urn:lsid:uw.edu:Run.Folder-6336:b086ea82-04aa-1038-baec-3013bb9b17af'
06 Jan 2020 21:47:41,435 DEBUG: Trying to load data file file:///data/labkey/files/Panorama%20Public/2020/Wollscheid%20-%20MSGUIDE/@files/export/xar/experiments_and_runs.xar.exploded/Run78728/20190920_HH_results_modeling.sky.zip into the system
06 Jan 2020 21:47:41,439 INFO : Starting import from 20190920_HH_results_modeling.sky.zip
06 Jan 2020 21:47:41,451 INFO : Starting to import Skyline document from 20190920_HH_results_modeling.sky.zip
06 Jan 2020 21:47:41,496 INFO : Expanding Human.protdb
06 Jan 2020 21:47:45,452 INFO : Expanding 20150129_jpt_neu.blib
06 Jan 2020 21:47:45,502 INFO : Expanding 20190920_HH_results_modeling.skyd
06 Jan 2020 21:47:46,171 INFO : Expanding 20190920_HH_results_modeling.sky.view
06 Jan 2020 21:47:46,172 INFO : Expanding 20190920_HH_results_modeling.sky
06 Jan 2020 21:47:46,211 INFO : 1% Done
06 Jan 2020 21:47:47,343 INFO : Inserting sp|Q9BXN1|ASPN_HUMAN
06 Jan 2020 21:47:47,436 INFO : 2% Done
06 Jan 2020 21:47:48,297 DEBUG: Total peptides inserted: 1
06 Jan 2020 21:47:48,376 INFO : Inserting sp|O75882|ATRN_HUMAN
06 Jan 2020 21:47:48,418 INFO : 3% Done
06 Jan 2020 21:47:48,739 INFO : 5% Done
06 Jan 2020 21:47:49,019 INFO : 6% Done
06 Jan 2020 21:47:49,332 DEBUG: Total peptides inserted: 3
06 Jan 2020 21:47:49,401 INFO : Inserting sp|P43251|BTD_HUMAN
06 Jan 2020 21:47:49,447 INFO : 7% Done
06 Jan 2020 21:47:49,731 INFO : 9% Done
06 Jan 2020 21:47:49,999 DEBUG: Total peptides inserted: 2
06 Jan 2020 21:47:50,067 INFO : Inserting sp|Q9BY67|CADM1_HUMAN
06 Jan 2020 21:47:50,114 INFO : 10% Done
06 Jan 2020 21:47:50,398 INFO : 11% Done
06 Jan 2020 21:47:50,669 DEBUG: Total peptides inserted: 2
06 Jan 2020 21:47:50,747 INFO : Inserting sp|P08603|CFAH_HUMAN
06 Jan 2020 21:47:50,793 INFO : 13% Done
06 Jan 2020 21:47:51,084 INFO : 14% Done
06 Jan 2020 21:47:51,420 DEBUG: Total peptides inserted: 2
06 Jan 2020 21:47:51,488 INFO : Inserting sp|P00450|CERU_HUMAN
06 Jan 2020 21:47:51,497 INFO : 16% Done
06 Jan 2020 21:47:51,787 INFO : 17% Done
06 Jan 2020 21:47:52,149 DEBUG: Total peptides inserted: 2
06 Jan 2020 21:47:52,239 INFO : Inserting sp|P07339|CATD_HUMAN
06 Jan 2020 21:47:52,292 INFO : 19% Done
06 Jan 2020 21:47:52,671 DEBUG: Total peptides inserted: 1
06 Jan 2020 21:47:52,789 INFO : Inserting sp|Q16610|ECM1_HUMAN
06 Jan 2020 21:47:52,823 INFO : 20% Done
06 Jan 2020 21:47:53,149 DEBUG: Total peptides inserted: 1
06 Jan 2020 21:47:53,241 INFO : Inserting sp|P02751|FINC_HUMAN
06 Jan 2020 21:47:53,278 INFO : 22% Done
06 Jan 2020 21:47:53,547 INFO : 23% Done
06 Jan 2020 21:47:53,798 DEBUG: Total peptides inserted: 2
06 Jan 2020 21:47:53,927 INFO : Inserting sp|Q8NBJ4|GOLM1_HUMAN
06 Jan 2020 21:47:53,978 INFO : 24% Done
06 Jan 2020 21:47:54,242 DEBUG: Total peptides inserted: 1
06 Jan 2020 21:47:54,331 INFO : Inserting sp|Q9Y4L1|HYOU1_HUMAN
06 Jan 2020 21:47:54,389 INFO : 27% Done
06 Jan 2020 21:47:54,906 DEBUG: Total peptides inserted: 1
06 Jan 2020 21:47:55,078 INFO : Inserting sp|P05362|ICAM1_HUMAN
06 Jan 2020 21:47:55,140 INFO : 28% Done
06 Jan 2020 21:47:55,873 INFO : 30% Done
06 Jan 2020 21:47:56,117 DEBUG: Total peptides inserted: 2
06 Jan 2020 21:47:56,214 INFO : Inserting sp|P32004|L1CAM_HUMAN
06 Jan 2020 21:47:56,560 INFO : 31% Done
06 Jan 2020 21:47:56,842 DEBUG: Total peptides inserted: 2
06 Jan 2020 21:47:56,901 INFO : Inserting sp|Q08380|LG3BP_HUMAN
06 Jan 2020 21:47:57,148 INFO : 33% Done
06 Jan 2020 21:47:57,409 INFO : 34% Done
06 Jan 2020 21:47:57,670 INFO : 35% Done
06 Jan 2020 21:47:57,922 DEBUG: Total peptides inserted: 3
06 Jan 2020 21:47:57,993 INFO : Inserting sp|P08473|NEP_HUMAN
06 Jan 2020 21:47:58,017 INFO : 37% Done
06 Jan 2020 21:47:58,336 DEBUG: Total peptides inserted: 1
06 Jan 2020 21:47:58,410 INFO : Inserting sp|P13591|NCAM1_HUMAN
06 Jan 2020 21:47:58,436 INFO : 38% Done
06 Jan 2020 21:47:58,691 DEBUG: Total peptides inserted: 1
06 Jan 2020 21:47:58,763 INFO : Inserting sp|Q6UX06|OLFM4_HUMAN
06 Jan 2020 21:47:59,092 DEBUG: Total peptides inserted: 1
06 Jan 2020 21:47:59,142 INFO : Inserting sp|O15031|PLXB2_HUMAN
06 Jan 2020 21:47:59,172 INFO : 40% Done
06 Jan 2020 21:47:59,428 DEBUG: Total peptides inserted: 1
06 Jan 2020 21:47:59,467 INFO : Inserting sp|P02787|TRFE_HUMAN
06 Jan 2020 21:47:59,498 INFO : 41% Done
06 Jan 2020 21:47:59,768 INFO : 42% Done
06 Jan 2020 21:48:00,056 DEBUG: Total peptides inserted: 2
06 Jan 2020 21:48:00,141 INFO : Inserting sp|P04004|VTNC_HUMAN
06 Jan 2020 21:48:00,166 INFO : 44% Done
06 Jan 2020 21:48:00,456 INFO : 46% Done
06 Jan 2020 21:48:00,703 INFO : 47% Done
06 Jan 2020 21:48:01,007 DEBUG: Total peptides inserted: 3
06 Jan 2020 21:48:01,108 INFO : Inserting sp|P51884|LUM_HUMAN
06 Jan 2020 21:48:01,154 INFO : 48% Done
06 Jan 2020 21:48:01,456 INFO : 50% Done
06 Jan 2020 21:48:01,719 DEBUG: Total peptides inserted: 2
06 Jan 2020 21:48:01,775 INFO : Inserting sp|P01833|PIGR_HUMAN
06 Jan 2020 21:48:01,801 INFO : 51% Done
06 Jan 2020 21:48:02,119 INFO : 52% Done
06 Jan 2020 21:48:02,347 DEBUG: Total peptides inserted: 2
06 Jan 2020 21:48:02,418 INFO : Inserting sp|P07996|TSP1_HUMAN
06 Jan 2020 21:48:02,442 INFO : 54% Done
06 Jan 2020 21:48:02,746 INFO : 55% Done
06 Jan 2020 21:48:03,048 DEBUG: Total peptides inserted: 2
06 Jan 2020 21:48:03,118 INFO : Inserting sp|P01033|TIMP1_HUMAN
06 Jan 2020 21:48:03,146 INFO : 56% Done
06 Jan 2020 21:48:03,446 DEBUG: Total peptides inserted: 1
06 Jan 2020 21:48:03,500 INFO : Inserting sp|P25311|ZA2G_HUMAN
06 Jan 2020 21:48:03,534 INFO : 58% Done
06 Jan 2020 21:48:03,829 DEBUG: Total peptides inserted: 1
06 Jan 2020 21:48:03,901 INFO : Inserting sp|P02452|CO1A1_HUMAN
06 Jan 2020 21:48:04,327 DEBUG: Total peptides inserted: 1
06 Jan 2020 21:48:04,388 INFO : Inserting sp|Q13308|PTK7_HUMAN
06 Jan 2020 21:48:04,416 INFO : 59% Done
06 Jan 2020 21:48:04,767 DEBUG: Total peptides inserted: 1
06 Jan 2020 21:48:04,813 INFO : Inserting sp|P14780|MMP9_HUMAN
06 Jan 2020 21:48:04,856 INFO : 60% Done
06 Jan 2020 21:48:05,106 DEBUG: Total peptides inserted: 1
06 Jan 2020 21:48:05,180 INFO : Inserting sp|Q15063|POSTN_HUMAN
06 Jan 2020 21:48:05,212 INFO : 62% Done
06 Jan 2020 21:48:05,493 DEBUG: Total peptides inserted: 1
06 Jan 2020 21:48:05,562 INFO : Inserting sp|Q13421|MSLN_HUMAN
06 Jan 2020 21:48:05,889 DEBUG: Total peptides inserted: 1
06 Jan 2020 21:48:05,964 INFO : Inserting sp|Q3SZR3|A1AG_BOVIN
06 Jan 2020 21:48:06,003 INFO : 63% Done
06 Jan 2020 21:48:06,290 INFO : 65% Done
06 Jan 2020 21:48:06,557 INFO : 66% Done
06 Jan 2020 21:48:06,787 DEBUG: Total peptides inserted: 3
06 Jan 2020 21:48:06,812 INFO : Inserting sp|Q58D62|FETUB_BOVINFetuin-BOS=BostaurusGN=FETUBPE=2SV=1
06 Jan 2020 21:48:06,842 INFO : 67% Done
06 Jan 2020 21:48:07,151 DEBUG: Total peptides inserted: 1
06 Jan 2020 21:48:07,151 INFO : Inserting iRT-C18
06 Jan 2020 21:48:07,183 INFO : 69% Done
06 Jan 2020 21:48:07,397 INFO : 70% Done
06 Jan 2020 21:48:07,632 INFO : 71% Done
06 Jan 2020 21:48:07,916 INFO : 72% Done
06 Jan 2020 21:48:08,119 INFO : 73% Done
06 Jan 2020 21:48:08,357 INFO : 74% Done
06 Jan 2020 21:48:08,577 INFO : 75% Done
06 Jan 2020 21:48:08,828 INFO : 77% Done
06 Jan 2020 21:48:09,060 INFO : 78% Done
06 Jan 2020 21:48:09,258 INFO : 79% Done
06 Jan 2020 21:48:09,474 INFO : 80% Done
06 Jan 2020 21:48:09,709 DEBUG: Total peptides inserted: 11
06 Jan 2020 21:48:09,709 INFO : Done parsing Skyline document.
06 Jan 2020 21:48:09,719 INFO : Calculating fold changes
06 Jan 2020 21:48:09,734 DEBUG: Calculating fold change for group comparison Pre- vs Postoperation, 1 of 1
06 Jan 2020 21:48:12,341 INFO : 98% Done
06 Jan 2020 21:48:12,342 INFO : Done calculating fold changes.
06 Jan 2020 21:48:14,519 INFO : Completed import of Skyline document from 20190920_HH_results_modeling.sky.zip
06 Jan 2020 21:48:14,521 INFO : 100% Done
06 Jan 2020 21:48:14,533 DEBUG: Finished trying to load data file file:///data/labkey/files/Panorama%20Public/2020/Wollscheid%20-%20MSGUIDE/@files/export/xar/experiments_and_runs.xar.exploded/Run78728/20190920_HH_results_modeling.sky.zip into the system
06 Jan 2020 21:48:14,533 DEBUG: Trying to load data file file:///data/labkey/files/Panorama%20Public/2020/Wollscheid%20-%20MSGUIDE/@files/export/xar/experiments_and_runs.xar.exploded/Run78728/20190920_HH_results_modeling/20190920_HH_results_modeling.skyd into the system
06 Jan 2020 21:48:14,534 DEBUG: Finished trying to load data file file:///data/labkey/files/Panorama%20Public/2020/Wollscheid%20-%20MSGUIDE/@files/export/xar/experiments_and_runs.xar.exploded/Run78728/20190920_HH_results_modeling/20190920_HH_results_modeling.skyd into the system
06 Jan 2020 21:48:14,534 DEBUG: Trying to load data file file:///data/labkey/files/Panorama%20Public/2020/Wollscheid%20-%20MSGUIDE/@files/export/xar/experiments_and_runs.xar.exploded/Run78727/20190906_heavy_light_jpt_all.sky.zip into the system
06 Jan 2020 21:48:14,537 INFO : Starting import from 20190906_heavy_light_jpt_all.sky.zip
06 Jan 2020 21:48:14,544 INFO : Starting to import Skyline document from 20190906_heavy_light_jpt_all.sky.zip
06 Jan 2020 21:48:14,549 INFO : Expanding Human.protdb
06 Jan 2020 21:48:18,885 INFO : Expanding 20150518_Fusion_iRT.irtdb
06 Jan 2020 21:48:18,885 INFO : Expanding 201912_MSGuide.blib
06 Jan 2020 21:48:18,906 INFO : Expanding 201912_MSGuide.redundant.blib
06 Jan 2020 21:48:19,237 INFO : Expanding 20150129_jpt_neu.blib
06 Jan 2020 21:48:19,288 INFO : Expanding 20190906_heavy_light_jpt_all.skyd
06 Jan 2020 21:48:19,348 INFO : Expanding 20190906_heavy_light_jpt_all.sky.view
06 Jan 2020 21:48:19,348 INFO : Expanding 20190906_heavy_light_jpt_all.sky
06 Jan 2020 21:48:19,359 INFO : 2% Done
06 Jan 2020 21:48:19,914 INFO : Inserting sp|Q9BXN1|ASPN_HUMAN
06 Jan 2020 21:48:19,922 INFO : 3% Done
06 Jan 2020 21:48:19,971 DEBUG: Total peptides inserted: 1
06 Jan 2020 21:48:19,979 INFO : Inserting sp|O75882|ATRN_HUMAN
06 Jan 2020 21:48:19,983 INFO : 4% Done
06 Jan 2020 21:48:20,075 INFO : 5% Done
06 Jan 2020 21:48:20,177 DEBUG: Total peptides inserted: 3
06 Jan 2020 21:48:20,185 INFO : Inserting sp|P43251|BTD_HUMAN
06 Jan 2020 21:48:20,189 INFO : 6% Done
06 Jan 2020 21:48:20,232 INFO : 7% Done
06 Jan 2020 21:48:20,300 INFO : 8% Done
06 Jan 2020 21:48:20,340 DEBUG: Total peptides inserted: 3
06 Jan 2020 21:48:20,349 INFO : Inserting sp|Q9BY67|CADM1_HUMAN
06 Jan 2020 21:48:20,351 INFO : 9% Done
06 Jan 2020 21:48:20,446 INFO : 10% Done
06 Jan 2020 21:48:20,480 DEBUG: Total peptides inserted: 3
06 Jan 2020 21:48:20,489 INFO : Inserting sp|P08603|CFAH_HUMAN
06 Jan 2020 21:48:20,491 INFO : 11% Done
06 Jan 2020 21:48:20,616 INFO : 12% Done
06 Jan 2020 21:48:20,650 DEBUG: Total peptides inserted: 2
06 Jan 2020 21:48:20,658 INFO : Inserting sp|P00450|CERU_HUMAN
06 Jan 2020 21:48:20,660 INFO : 13% Done
06 Jan 2020 21:48:20,762 INFO : 14% Done
06 Jan 2020 21:48:20,801 DEBUG: Total peptides inserted: 3
06 Jan 2020 21:48:20,810 INFO : Inserting sp|P07339|CATD_HUMAN
06 Jan 2020 21:48:20,812 INFO : 15% Done
06 Jan 2020 21:48:20,852 DEBUG: Total peptides inserted: 1
06 Jan 2020 21:48:20,860 INFO : Inserting sp|Q16610|ECM1_HUMAN
06 Jan 2020 21:48:20,862 INFO : 16% Done
06 Jan 2020 21:48:20,903 INFO : 17% Done
06 Jan 2020 21:48:20,963 DEBUG: Total peptides inserted: 2
06 Jan 2020 21:48:20,971 INFO : Inserting sp|P02751|FINC_HUMAN
06 Jan 2020 21:48:20,972 INFO : 18% Done
06 Jan 2020 21:48:21,014 INFO : 19% Done
06 Jan 2020 21:48:21,058 DEBUG: Total peptides inserted: 2
06 Jan 2020 21:48:21,126 INFO : Inserting sp|Q6P9A2|GLT18_HUMAN
06 Jan 2020 21:48:21,224 INFO : 20% Done
06 Jan 2020 21:48:21,287 DEBUG: Total peptides inserted: 2
06 Jan 2020 21:48:21,295 INFO : Inserting sp|Q8NBJ4|GOLM1_HUMAN
06 Jan 2020 21:48:21,297 INFO : 21% Done
06 Jan 2020 21:48:21,397 DEBUG: Total peptides inserted: 2
06 Jan 2020 21:48:21,398 INFO : 22% Done
06 Jan 2020 21:48:21,406 INFO : Inserting sp|Q9Y4L1|HYOU1_HUMAN
06 Jan 2020 21:48:21,408 INFO : 23% Done
06 Jan 2020 21:48:21,542 INFO : 24% Done
06 Jan 2020 21:48:21,648 DEBUG: Total peptides inserted: 3
06 Jan 2020 21:48:21,656 INFO : Inserting sp|P05362|ICAM1_HUMAN
06 Jan 2020 21:48:21,658 INFO : 25% Done
06 Jan 2020 21:48:21,774 INFO : 26% Done
06 Jan 2020 21:48:21,819 DEBUG: Total peptides inserted: 3
06 Jan 2020 21:48:21,827 INFO : Inserting sp|P32004|L1CAM_HUMAN
06 Jan 2020 21:48:21,880 INFO : 27% Done
06 Jan 2020 21:48:21,920 INFO : 28% Done
06 Jan 2020 21:48:21,963 DEBUG: Total peptides inserted: 3
06 Jan 2020 21:48:21,971 INFO : Inserting sp|Q08380|LG3BP_HUMAN
06 Jan 2020 21:48:21,972 INFO : 29% Done
06 Jan 2020 21:48:22,032 INFO : 30% Done
06 Jan 2020 21:48:22,102 DEBUG: Total peptides inserted: 3
06 Jan 2020 21:48:22,102 INFO : 31% Done
06 Jan 2020 21:48:22,195 INFO : Inserting sp|Q07954|LRP1_HUMAN
06 Jan 2020 21:48:22,296 INFO : 32% Done
06 Jan 2020 21:48:22,394 INFO : 33% Done
06 Jan 2020 21:48:22,449 DEBUG: Total peptides inserted: 3
06 Jan 2020 21:48:22,456 INFO : Inserting sp|P08473|NEP_HUMAN
06 Jan 2020 21:48:22,458 INFO : 34% Done
06 Jan 2020 21:48:22,553 DEBUG: Total peptides inserted: 2
06 Jan 2020 21:48:22,561 INFO : Inserting sp|P13591|NCAM1_HUMAN
06 Jan 2020 21:48:22,562 INFO : 35% Done
06 Jan 2020 21:48:22,677 INFO : 36% Done
06 Jan 2020 21:48:22,717 INFO : 37% Done
06 Jan 2020 21:48:22,782 DEBUG: Total peptides inserted: 3
06 Jan 2020 21:48:22,790 INFO : Inserting sp|Q6UX06|OLFM4_HUMAN
06 Jan 2020 21:48:22,831 INFO : 38% Done
06 Jan 2020 21:48:22,954 DEBUG: Total peptides inserted: 3
06 Jan 2020 21:48:22,961 INFO : Inserting sp|O15031|PLXB2_HUMAN
06 Jan 2020 21:48:22,963 INFO : 40% Done
06 Jan 2020 21:48:22,998 DEBUG: Total peptides inserted: 1
06 Jan 2020 21:48:23,006 INFO : Inserting sp|P02787|TRFE_HUMAN
06 Jan 2020 21:48:23,046 INFO : 41% Done
06 Jan 2020 21:48:23,081 DEBUG: Total peptides inserted: 2
06 Jan 2020 21:48:23,089 INFO : Inserting sp|P04004|VTNC_HUMAN
06 Jan 2020 21:48:23,091 INFO : 42% Done
06 Jan 2020 21:48:23,187 INFO : 43% Done
06 Jan 2020 21:48:23,216 DEBUG: Total peptides inserted: 3
06 Jan 2020 21:48:23,260 INFO : Inserting sp|P13688|CEAM1_HUMAN
06 Jan 2020 21:48:23,286 INFO : 44% Done
06 Jan 2020 21:48:23,400 INFO : 45% Done
06 Jan 2020 21:48:23,461 DEBUG: Total peptides inserted: 3
06 Jan 2020 21:48:23,506 INFO : Inserting sp|P14384|CBPM_HUMAN
06 Jan 2020 21:48:23,530 INFO : 46% Done
06 Jan 2020 21:48:23,598 INFO : 47% Done
06 Jan 2020 21:48:23,725 DEBUG: Total peptides inserted: 3
06 Jan 2020 21:48:23,725 INFO : 48% Done
06 Jan 2020 21:48:23,785 INFO : Inserting sp|P42702|LIFR_HUMAN
06 Jan 2020 21:48:24,207 INFO : 49% Done
06 Jan 2020 21:48:24,292 DEBUG: Total peptides inserted: 3
06 Jan 2020 21:48:24,300 INFO : Inserting sp|P51884|LUM_HUMAN
06 Jan 2020 21:48:24,302 INFO : 50% Done
06 Jan 2020 21:48:24,337 INFO : 51% Done
06 Jan 2020 21:48:24,439 DEBUG: Total peptides inserted: 3
06 Jan 2020 21:48:24,439 INFO : 52% Done
06 Jan 2020 21:48:24,448 INFO : Inserting sp|P01833|PIGR_HUMAN
06 Jan 2020 21:48:24,508 INFO : 53% Done
06 Jan 2020 21:48:24,547 DEBUG: Total peptides inserted: 3
06 Jan 2020 21:48:24,555 INFO : Inserting sp|P07996|TSP1_HUMAN
06 Jan 2020 21:48:24,589 INFO : 55% Done
06 Jan 2020 21:48:24,700 DEBUG: Total peptides inserted: 2
06 Jan 2020 21:48:24,706 INFO : Inserting sp|P01033|TIMP1_HUMAN
06 Jan 2020 21:48:24,762 DEBUG: Total peptides inserted: 1
06 Jan 2020 21:48:24,762 INFO : 56% Done
06 Jan 2020 21:48:24,768 INFO : Inserting sp|P25311|ZA2G_HUMAN
06 Jan 2020 21:48:24,818 INFO : 57% Done
06 Jan 2020 21:48:24,852 DEBUG: Total peptides inserted: 2
06 Jan 2020 21:48:24,907 INFO : Inserting sp|P21810|PGS1_HUMAN
06 Jan 2020 21:48:24,945 INFO : 58% Done
06 Jan 2020 21:48:25,001 DEBUG: Total peptides inserted: 1
06 Jan 2020 21:48:25,007 INFO : Inserting sp|P02452|CO1A1_HUMAN
06 Jan 2020 21:48:25,008 INFO : 59% Done
06 Jan 2020 21:48:25,059 INFO : 60% Done
06 Jan 2020 21:48:25,122 DEBUG: Total peptides inserted: 2
06 Jan 2020 21:48:25,218 INFO : Inserting sp|Q6FHJ7|SFRP4_HUMAN
06 Jan 2020 21:48:25,322 DEBUG: Total peptides inserted: 1
06 Jan 2020 21:48:25,376 INFO : Inserting sp|P20151|KLK2_HUMAN
06 Jan 2020 21:48:25,399 INFO : 62% Done
06 Jan 2020 21:48:25,665 DEBUG: Total peptides inserted: 2
06 Jan 2020 21:48:25,736 INFO : Inserting sp|P12830|CADH1_HUMAN
06 Jan 2020 21:48:25,862 DEBUG: Total peptides inserted: 1
06 Jan 2020 21:48:25,917 INFO : Inserting sp|P54108|CRIS3_HUMAN
06 Jan 2020 21:48:25,956 INFO : 63% Done
06 Jan 2020 21:48:26,039 DEBUG: Total peptides inserted: 2
06 Jan 2020 21:48:26,069 INFO : Inserting sp|P05981|HEPS_HUMAN
06 Jan 2020 21:48:26,088 INFO : 64% Done
06 Jan 2020 21:48:26,158 DEBUG: Total peptides inserted: 1
06 Jan 2020 21:48:26,214 INFO : Inserting sp|P05231|IL6_HUMAN
06 Jan 2020 21:48:26,294 DEBUG: Total peptides inserted: 1
06 Jan 2020 21:48:26,318 INFO : Inserting sp|Q9UBX7|KLK11_HUMAN
06 Jan 2020 21:48:26,356 INFO : 65% Done
06 Jan 2020 21:48:26,426 INFO : 66% Done
06 Jan 2020 21:48:26,532 DEBUG: Total peptides inserted: 4
06 Jan 2020 21:48:26,532 INFO : 67% Done
06 Jan 2020 21:48:26,571 INFO : Inserting sp|P00749|UROK_HUMAN
06 Jan 2020 21:48:26,652 DEBUG: Total peptides inserted: 1
06 Jan 2020 21:48:26,729 INFO : Inserting sp|O43653|PSCA_HUMAN
06 Jan 2020 21:48:26,772 INFO : 68% Done
06 Jan 2020 21:48:26,837 DEBUG: Total peptides inserted: 1
06 Jan 2020 21:48:26,908 INFO : Inserting sp|Q04609|FOLH1_HUMAN
06 Jan 2020 21:48:26,940 INFO : 69% Done
06 Jan 2020 21:48:27,061 INFO : 70% Done
06 Jan 2020 21:48:27,108 DEBUG: Total peptides inserted: 3
06 Jan 2020 21:48:27,156 INFO : Inserting sp|P08253|MMP2_HUMAN
06 Jan 2020 21:48:27,171 INFO : 71% Done
06 Jan 2020 21:48:27,286 DEBUG: Total peptides inserted: 2
06 Jan 2020 21:48:27,345 INFO : Inserting sp|Q02083|NAAA_HUMAN
06 Jan 2020 21:48:27,347 INFO : 72% Done
06 Jan 2020 21:48:27,395 DEBUG: Total peptides inserted: 1
06 Jan 2020 21:48:27,396 INFO : 73% Done
06 Jan 2020 21:48:27,404 INFO : Inserting sp|Q13308|PTK7_HUMAN
06 Jan 2020 21:48:27,446 INFO : 74% Done
06 Jan 2020 21:48:27,553 DEBUG: Total peptides inserted: 3
06 Jan 2020 21:48:27,560 INFO : Inserting sp|P14780|MMP9_HUMAN
06 Jan 2020 21:48:27,591 INFO : 75% Done
06 Jan 2020 21:48:27,637 DEBUG: Total peptides inserted: 2
06 Jan 2020 21:48:27,640 INFO : 79% Done
06 Jan 2020 21:48:27,696 INFO : Inserting sp|Q8WXI7|MUC16_HUMAN
06 Jan 2020 21:48:27,731 INFO : 80% Done
06 Jan 2020 21:48:27,840 INFO : 81% Done
06 Jan 2020 21:48:27,897 DEBUG: Total peptides inserted: 3
06 Jan 2020 21:48:27,932 INFO : Inserting sp|P06731|CEAM5_HUMAN
06 Jan 2020 21:48:28,014 INFO : 82% Done
06 Jan 2020 21:48:28,068 INFO : 83% Done
06 Jan 2020 21:48:28,124 DEBUG: Total peptides inserted: 3
06 Jan 2020 21:48:28,184 INFO : Inserting sp|P15309|PPAP_HUMAN
06 Jan 2020 21:48:28,265 DEBUG: Total peptides inserted: 1
06 Jan 2020 21:48:28,265 INFO : 84% Done
06 Jan 2020 21:48:28,272 INFO : Inserting sp|Q15063|POSTN_HUMAN
06 Jan 2020 21:48:28,308 DEBUG: Total peptides inserted: 1
06 Jan 2020 21:48:28,338 INFO : Inserting sp|P07288|KLK3_HUMAN
06 Jan 2020 21:48:28,384 INFO : 85% Done
06 Jan 2020 21:48:28,430 DEBUG: Total peptides inserted: 1
06 Jan 2020 21:48:28,439 INFO : Inserting sp|Q13421|MSLN_HUMAN
06 Jan 2020 21:48:28,440 INFO : 86% Done
06 Jan 2020 21:48:28,529 DEBUG: Total peptides inserted: 2
06 Jan 2020 21:48:28,536 INFO : Inserting sp|Q3SZR3|A1AG_BOVIN
06 Jan 2020 21:48:28,538 INFO : 87% Done
06 Jan 2020 21:48:28,591 INFO : 88% Done
06 Jan 2020 21:48:28,627 DEBUG: Total peptides inserted: 3
06 Jan 2020 21:48:28,627 INFO : Inserting iRT-C18
06 Jan 2020 21:48:28,629 INFO : 89% Done
06 Jan 2020 21:48:28,679 INFO : 90% Done
06 Jan 2020 21:48:28,710 INFO : 91% Done
06 Jan 2020 21:48:28,738 INFO : 92% Done
06 Jan 2020 21:48:28,792 INFO : 94% Done
06 Jan 2020 21:48:28,848 INFO : 95% Done
06 Jan 2020 21:48:28,876 INFO : 97% Done
06 Jan 2020 21:48:28,932 INFO : 98% Done
06 Jan 2020 21:48:28,955 DEBUG: Total peptides inserted: 11
06 Jan 2020 21:48:28,955 INFO : Done parsing Skyline document.
06 Jan 2020 21:48:30,700 INFO : Completed import of Skyline document from 20190906_heavy_light_jpt_all.sky.zip
06 Jan 2020 21:48:30,701 INFO : 100% Done
06 Jan 2020 21:48:30,711 DEBUG: Finished trying to load data file file:///data/labkey/files/Panorama%20Public/2020/Wollscheid%20-%20MSGUIDE/@files/export/xar/experiments_and_runs.xar.exploded/Run78727/20190906_heavy_light_jpt_all.sky.zip into the system
06 Jan 2020 21:48:30,711 DEBUG: Trying to load data file file:///data/labkey/files/Panorama%20Public/2020/Wollscheid%20-%20MSGUIDE/@files/export/xar/experiments_and_runs.xar.exploded/Run78727/20190906_heavy_light_jpt_all/20190906_heavy_light_jpt_all.skyd into the system
06 Jan 2020 21:48:30,711 DEBUG: Finished trying to load data file file:///data/labkey/files/Panorama%20Public/2020/Wollscheid%20-%20MSGUIDE/@files/export/xar/experiments_and_runs.xar.exploded/Run78727/20190906_heavy_light_jpt_all/20190906_heavy_light_jpt_all.skyd into the system
06 Jan 2020 21:48:30,740 INFO : Done importing xar
06 Jan 2020 21:48:30,744 INFO : Loading pages and webpart properties
06 Jan 2020 21:48:30,969 INFO : Done importing pages and webpart properties
06 Jan 2020 21:48:30,969 INFO :
06 Jan 2020 21:48:30,969 INFO : Experiment import completed successfully.
06 Jan 2020 21:48:30,969 INFO : Successfully completed task 'org.labkey.panoramapublic.pipeline.ExperimentImportTask'
06 Jan 2020 21:48:31,025 INFO : Starting to run task 'org.labkey.panoramapublic.pipeline.CopyExperimentFinalTask' at location 'webserver-high-priority'
06 Jan 2020 21:48:31,025 INFO :
06 Jan 2020 21:48:31,025 INFO : Finishing up experiment copy.
06 Jan 2020 21:48:31,027 INFO : Creating a new TargetedMS experiment entry in panoramapublic.ExperimentAnnotations.
06 Jan 2020 21:48:31,097 INFO : Updating access URL to point to the new copy of the data.
06 Jan 2020 21:48:31,255 INFO : Setting the 'copied' timestamp on the JournalExperiment table.
06 Jan 2020 21:48:31,278 INFO : Removing copy permissions given to journal.
06 Jan 2020 21:48:31,338 INFO : Adding read permissions to all users that are folder admins in the source container.
06 Jan 2020 21:48:31,360 INFO : Setting the TargetedMS folder type to 'Experimental Data'
06 Jan 2020 21:48:31,376 INFO : Updating the 'Raw Data' tab configuration
06 Jan 2020 21:48:31,383 INFO : Updating dataFileUrls for run 20190920_HH_results_modeling.sky.zip; targetedms run ID 80582
06 Jan 2020 21:48:31,383 INFO : Updating dataFileUrl...
06 Jan 2020 21:48:31,383 INFO : from: file:///data/labkey/files/Panorama%20Public/2020/Wollscheid%20-%20MSGUIDE/@files/export/xar/experiments_and_runs.xar.exploded/Run78728/20190920_HH_results_modeling.sky.zip
06 Jan 2020 21:48:31,384 INFO : to: file:///data/labkey/files/Panorama%20Public/2020/Wollscheid%20-%20MSGUIDE/@files/20190920_HH_results_modeling.sky.zip
06 Jan 2020 21:48:31,433 INFO : Updating dataFileUrl...
06 Jan 2020 21:48:31,433 INFO : from: file:///data/labkey/files/Panorama%20Public/2020/Wollscheid%20-%20MSGUIDE/@files/export/xar/experiments_and_runs.xar.exploded/Run78728/20190920_HH_results_modeling/20190920_HH_results_modeling.skyd
06 Jan 2020 21:48:31,433 INFO : to: file:///data/labkey/files/Panorama%20Public/2020/Wollscheid%20-%20MSGUIDE/@files/20190920_HH_results_modeling/20190920_HH_results_modeling.skyd
06 Jan 2020 21:48:31,453 INFO : Updating dataFileUrls for run 20190906_heavy_light_jpt_all.sky.zip; targetedms run ID 80583
06 Jan 2020 21:48:31,454 INFO : Updating dataFileUrl...
06 Jan 2020 21:48:31,454 INFO : from: file:///data/labkey/files/Panorama%20Public/2020/Wollscheid%20-%20MSGUIDE/@files/export/xar/experiments_and_runs.xar.exploded/Run78727/20190906_heavy_light_jpt_all/20190906_heavy_light_jpt_all.skyd
06 Jan 2020 21:48:31,454 INFO : to: file:///data/labkey/files/Panorama%20Public/2020/Wollscheid%20-%20MSGUIDE/@files/20190906_heavy_light_jpt_all/20190906_heavy_light_jpt_all.skyd
06 Jan 2020 21:48:31,459 INFO : Updating dataFileUrl...
06 Jan 2020 21:48:31,459 INFO : from: file:///data/labkey/files/Panorama%20Public/2020/Wollscheid%20-%20MSGUIDE/@files/export/xar/experiments_and_runs.xar.exploded/Run78727/20190906_heavy_light_jpt_all.sky.zip
06 Jan 2020 21:48:31,459 INFO : to: file:///data/labkey/files/Panorama%20Public/2020/Wollscheid%20-%20MSGUIDE/@files/20190906_heavy_light_jpt_all.sky.zip
06 Jan 2020 21:48:41,739 INFO : Successfully completed task 'org.labkey.panoramapublic.pipeline.CopyExperimentFinalTask'