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Validating data for experiment Id: 943, validation Id: 1512

QIMRBerghofer - Identification of candidate circulating glucocorticoid response biomarkers in humans using a proteomic approach

Job Status

Created: 2025-03-03 00:18:34
Modified: 2025-03-03 00:18:35
Email: vsharma@uw.edu
Status: COMPLETE
Info:
Description: Validating data for experiment Id: 943, validation Id: 1512
File Path: /data/labkey/files/Panorama Public/2020/QIMRBerghofer - Identification of candidate circulating glucocorticoid response biomarkers in humans using a proteomic approach/@files/Experiment_Validation_1006_2025-03-03_00-18-34.log
Files: Experiment_Validation_1006_2025-03-03_00-18-34.log
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Log File


03 Mar 2025 00:18:34,947 INFO : Validating data for a ProteomeXchange submission.
03 Mar 2025 00:18:34,948 INFO : =======================================
03 Mar 2025 00:18:34,978 INFO : Starting to run task 'org.labkey.panoramapublic.pipeline.PxDataValidationTask' at location 'webserver'
03 Mar 2025 00:18:34,979 INFO : Validating data for experiment Id: 943, validation Id: 1512
03 Mar 2025 00:18:34,996 INFO : Validating data for 1 Skyline documents in 1 folders
03 Mar 2025 00:18:35,010 INFO : Sample file validation for Skyline document: 20171010_JB_BM_rep_AM_filtered_2020-06-22_14-26-36.sky.zip
03 Mar 2025 00:18:35,010 INFO :   Found all sample files.
03 Mar 2025 00:18:35,072 INFO : Modifications validation:
03 Mar 2025 00:18:35,072 INFO : VALID MODIFICATIONS:
03 Mar 2025 00:18:35,072 INFO : 10850: Carbamidomethyl (C): UNIMOD:4 - Carbamidomethyl
03 Mar 2025 00:18:35,072 INFO :     20171010_JB_BM_rep_AM_filtered_2020-06-22_14-26-36.sky.zip
03 Mar 2025 00:18:35,072 INFO : INVALID MODIFICATIONS (No Unimod ID):
03 Mar 2025 00:18:35,074 INFO : Validating spectral library: 170620_JBarclay_PBMC_MQ_TS.blib
03 Mar 2025 00:18:35,215 INFO : '170620_JBarclay_PBMC_MQ_TS' (170620_JBarclay_PBMC_MQ_TS.blib) library in 1 Skyline documents was built with 24 raw files; 3 peptide Id files. Status: Missing spectrum and peptide Id  files.
03 Mar 2025 00:18:35,215 INFO :   MISSING FILES:
03 Mar 2025 00:18:35,215 INFO :     Spectrum File: 20160727_JBarclay_13
03 Mar 2025 00:18:35,216 INFO :     Spectrum File: 20160727_JBarclay_14
03 Mar 2025 00:18:35,216 INFO :     Spectrum File: 20160727_JBarclay_15
03 Mar 2025 00:18:35,216 INFO :     Spectrum File: 20160727_JBarclay_16
03 Mar 2025 00:18:35,216 INFO :     Spectrum File: 20160727_JBarclay_17
03 Mar 2025 00:18:35,216 INFO :     Spectrum File: 20160727_JBarclay_18
03 Mar 2025 00:18:35,216 INFO :     Spectrum File: 20160727_JBarclay_19
03 Mar 2025 00:18:35,216 INFO :     Spectrum File: 20160727_JBarclay_20
03 Mar 2025 00:18:35,216 INFO :     Spectrum File: 20160727_JBarclay_21
03 Mar 2025 00:18:35,216 INFO :     Spectrum File: 20160727_JBarclay_22
03 Mar 2025 00:18:35,216 INFO :     Spectrum File: 20160727_JBarclay_23
03 Mar 2025 00:18:35,216 INFO :     Spectrum File: 20160727_JBarclay_24
03 Mar 2025 00:18:35,216 INFO :     Spectrum File: 20160727_JBarclay_1
03 Mar 2025 00:18:35,216 INFO :     Spectrum File: 20160727_JBarclay_10
03 Mar 2025 00:18:35,216 INFO :     Spectrum File: 20160727_JBarclay_11
03 Mar 2025 00:18:35,216 INFO :     Spectrum File: 20160727_JBarclay_12
03 Mar 2025 00:18:35,216 INFO :     Spectrum File: 20160727_JBarclay_2
03 Mar 2025 00:18:35,216 INFO :     Spectrum File: 20160727_JBarclay_3
03 Mar 2025 00:18:35,216 INFO :     Spectrum File: 20160727_JBarclay_4
03 Mar 2025 00:18:35,216 INFO :     Spectrum File: 20160727_JBarclay_5
03 Mar 2025 00:18:35,216 INFO :     Spectrum File: 20160727_JBarclay_6
03 Mar 2025 00:18:35,216 INFO :     Spectrum File: 20160727_JBarclay_7
03 Mar 2025 00:18:35,216 INFO :     Spectrum File: 20160727_JBarclay_8
03 Mar 2025 00:18:35,216 INFO :     Spectrum File: 20160727_JBarclay_9
03 Mar 2025 00:18:35,216 INFO :     Peptide Id File: evidence.txt
03 Mar 2025 00:18:35,216 INFO : Spectral library validation complete.
03 Mar 2025 00:18:35,216 INFO : Data validation is complete. Status is IncompleteMetadata
03 Mar 2025 00:18:35,217 INFO : Successfully completed task 'org.labkey.panoramapublic.pipeline.PxDataValidationTask'