PDI: /Panorama Public/2019/UW Roberts Lab - Geoduck-OA-eelgrass

PDI

UW Roberts Lab - Geoduck-OA-eelgrass

Protein

File	2017-geoduck-SRM.sky.zip 191 MB SkyP file (link only, 1KB) Full Skyline file Copy relative URL to clipboard Copy full URL to clipboard
Description	Protein disulfide-isomerase cds.comp135363_c0_seq1\|m.24227 comp135363_c0_seq1\|g.24227 ORF comp135363_c0_seq1\|g.24227 comp135363_c0_seq1\|m.24227 type:internal len:521 (-) comp135363_c0_seq1:2-1561(-)
Decoy	false
Note

Sequence Coverage

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By: Replicate: Modified forms: Combined Stacked

The number displayed on each peptide box is the rank
1										11										21										31										41										51										61										71										81										91
V	E	Y	T	T	S	E	C	L	S	N	I	L	Q	N	I	F	L	K	M	K	V	I	L	I	L	L	L	V	S	F	S	G	I	I	A	T	E	Y	T	E	E	D	G	V	L	V	L	T	D	D	T	I	D	D	A	L	Q	E	F	E	H	I	L	V	E	F	Y	A	P	W	C	G	H	C	K	A	L	T	P	E	Y	V	K	A	A	K	A	L	A	D	E	Q	S	P	I	K	L	A	K


101										111										121										131										141										151										161										171										181										191
V	D	A	T	I	Q	T	K	C	A	K	K	Y	E	V	Q	G	Y	P	T	I	K	F	F	R	N	N	K	P	S	D	Y	Q	G	G	R	Q	A	A	D	I	V	N	W	L	K	K	K	T	G	P	A	A	V	T	L	T	S	V	E	Q	C	N	T	M	I	E	K	D	N	V	V	V	I	G	F	F	K	D	V	D	S	D	G	A	K	A	F	L	E	A	A	A	G	I	D	D	I	P	F
																									3																																											1

201										211										221										231										241										251										261										271										281										291
G	V	T	S	D	S	A	L	F	K	E	N	E	M	D	S	D	G	V	M	L	F	K	K	F	D	E	G	K	N	R	L	D	G	E	V	T	A	A	S	V	K	A	F	I	A	E	N	S	L	P	L	V	I	E	F	T	Q	E	S	A	Q	K	I	F	G	G	E	V	K	T	H	I	L	L	F	T	D	N	V	E	Q	D	S	A	N	M	V	A	Y	K	E	V	A	A	G	F	K	G	K


301										311										321										331										341										351										361										371										381										391
V	L	F	I	Y	I	N	V	G	Q	E	D	N	E	R	I	L	E	F	F	G	L	K	K	L	E	C	P	A	V	R	L	I	Q	L	E	E	D	M	T	K	F	K	P	E	V	Q	E	I	T	V	D	S	L	K	T	F	V	S	S	V	L	D	G	S	L	K	A	H	L	M	S	E	D	V	P	E	D	W	D	A	K	P	V	K	V	L	V	S	K	N	F	A	E	V	A	K	N	K	D


401										411										421										431										441										451										461										471										481										491
K	D	V	L	V	E	F	Y	A	P	W	C	G	H	C	K	Q	L	A	P	I	W	D	E	L	G	E	K	F	A	D	S	D	S	V	V	V	A	K	M	D	S	T	A	N	E	V	E	D	V	K	V	Q	S	F	P	T	I	K	C	F	P	K	D	G	K	D	A	I	D	Y	N	G	E	R	N	L	A	G	F	E	A	F	L	K	A	G	C	S	K	E	A	A	G	T	P	M	D	E	D
																																							2

501										511
E	M	D	E	D	E	E	G	E	E	G	E	E	E	E	E	E	E	E	E

Intensity

(Log 10 base)

Annotations for PDI

Description	Protein disulfide-isomerase cds.comp135363_c0_seq1\|m.24227 comp135363_c0_seq1\|g.24227 ORF comp135363_c0_seq1\|g.24227 comp135363_c0_seq1\|m.24227 type:internal len:521 (-) comp135363_c0_seq1:2-1561(-)
Gene name
Organism	Unknown unknown

Genbank IDs	GIs	Swiss-Prot Accessions	Swiss-Prot Names	Ensembl	IPI Numbers	GO Categories
none loaded	none loaded	none loaded	none loaded	none loaded	none loaded	none loaded

Peptides

Select All Select None Show Selected Show Unselected Show All	Peptide Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Bar Chart Pie Chart Quick Chart	Peptide Neutral Mass Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	Missed Cleavages Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	Avg. Measured RT Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	Predicted RT Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	RT Score Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart
	NNKPSDYQGGR	1234.5691	0	14.8930
	DNVVVIGFFK	1136.6230	0	33.2550
	MDSTANEVEDVK	1336.5817	0	20.6204

Chromatograms

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Summary Charts

Peak Areas

Retention Times