Glycogen: /Panorama Public/2019/UW Roberts Lab - Geoduck-OA-eelgrass

Glycogen

UW Roberts Lab - Geoduck-OA-eelgrass

Protein

File	2017-geoduck-SRM.sky.zip 191 MB SkyP file (link only, 1KB) Full Skyline file Copy relative URL to clipboard Copy full URL to clipboard
Description	phosphorylase, muscle form cds.comp143236_c1_seq1\|m.45178 comp143236_c1_seq1\|g.45178 ORF comp143236_c1_seq1\|g.45178 comp143236_c1_seq1\|m.45178 type:complete len:857 (+) comp143236_c1_seq1:98-2668(+)
Decoy	false
Note

Sequence Coverage

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By: Replicate: Modified forms: Combined Stacked

The number displayed on each peptide box is the rank
1										11										21										31										41										51										61										71										81										91
M	A	T	P	Q	T	D	T	D	K	R	K	Q	I	S	I	R	G	I	A	P	V	E	N	V	S	N	V	K	K	T	F	N	R	H	L	H	Y	T	L	V	K	D	R	N	V	A	T	P	R	D	Y	Y	Y	A	L	A	H	T	V	R	D	H	L	T	G	R	W	I	R	T	Q	Q	H	Y	Y	E	K	D	P	K	R	V	Y	Y	L	S	L	E	F	Y	M	G	R	T	L	S	N	T	M


101										111										121										131										141										151										161										171										181										191
V	N	L	G	I	Q	S	S	C	D	E	A	M	Y	Q	L	G	L	D	I	E	E	L	E	E	I	E	E	D	A	G	L	G	N	G	G	L	G	R	L	A	A	C	F	L	D	S	M	A	T	L	G	L	A	A	Y	G	Y	G	I	R	Y	D	Y	G	I	F	A	Q	K	I	E	N	G	W	Q	L	E	E	P	D	D	W	L	R	Y	G	N	P	W	E	K	A	R	P	E	Y	V	L	P


201										211										221										231										241										251										261										271										281										291
V	N	F	F	G	R	V	E	D	K	D	G	K	K	K	W	V	D	T	Q	V	V	F	A	M	P	Y	D	S	P	I	P	G	Y	G	N	N	T	V	N	T	M	R	L	W	S	A	K	A	P	N	S	F	N	L	R	F	F	N	S	G	E	Y	I	S	A	V	C	D	R	N	L	A	E	N	I	S	R	V	L	Y	P	N	D	N	F	F	E	G	K	E	L	R	L	K	Q	E	Y	F	L
																																																1																														3

301										311										321										331										341										351										361										371										381										391
V	A	A	T	L	Q	D	I	I	R	R	F	K	S	S	K	F	G	S	R	D	P	V	R	T	S	F	D	A	F	P	D	K	V	A	I	Q	L	N	D	T	H	P	A	M	A	L	P	E	L	M	R	I	F	V	D	I	E	G	L	T	W	D	K	A	W	E	L	T	V	K	T	C	A	Y	T	N	H	T	V	L	P	E	A	L	E	R	W	P	T	S	L	L	E	T	L	L	P	R	H
																								2

401										411										421										431										441										451										461										471										481										491
L	Q	I	I	Y	Y	I	N	H	L	F	L	E	E	V	K	K	K	F	P	G	D	S	G	R	L	G	R	M	S	I	V	E	E	H	G	E	K	R	I	N	M	A	H	L	A	I	V	G	S	H	A	I	N	G	V	A	A	I	H	S	E	I	I	K	T	K	T	F	K	D	F	H	E	M	F	P	D	R	F	Q	N	K	T	N	G	I	T	P	R	R	W	L	L	L	C	N	P	G	L


501										511										521										531										541										551										561										571										581										591
S	D	V	I	A	E	K	I	G	E	V	W	V	T	D	L	Y	A	L	K	E	L	K	Q	Y	D	S	N	E	M	F	L	R	T	I	M	K	V	K	Q	E	N	K	M	K	L	A	A	Y	I	K	Q	E	Y	N	I	D	V	N	S	A	S	I	F	D	I	H	V	K	R	I	H	E	Y	K	R	Q	L	L	N	C	M	H	I	I	T	L	Y	N	R	I	K	K	D	P	N	K	P	V	T


601										611										621										631										641										651										661										671										681										691
P	R	T	V	M	I	G	G	K	A	A	P	G	Y	H	M	A	K	L	I	I	K	L	I	N	C	V	G	N	V	V	N	N	D	P	I	I	G	D	K	L	K	V	V	Y	L	E	N	Y	R	V	S	L	A	E	K	I	I	P	A	A	D	L	S	E	Q	I	S	T	A	G	T	E	A	S	G	T	G	N	M	K	F	Q	L	N	G	A	L	T	I	G	T	L	D	G	A	N	V	E	M


701										711										721										731										741										751										761										771										781										791
R	E	E	M	G	D	E	N	I	F	I	F	G	M	T	V	E	E	V	E	A	L	E	R	K	G	Y	N	S	R	D	Y	Y	D	A	N	E	D	I	R	Q	V	V	E	Q	I	N	N	G	Y	F	N	P	D	E	P	Q	L	F	K	D	I	Y	N	T	L	M	H	H	D	R	F	M	L	L	A	D	Y	E	A	Y	I	K	C	Q	D	R	V	G	E	V	F	K	N	P	M	L	W	A	K


801										811										821										831										841										851
M	C	L	H	N	I	A	S	S	G	K	F	S	S	D	R	T	I	S	E	Y	A	K	D	I	W	G	T	D	P	T	E	F	K	L	P	A	P	H	E	S	A	L	D	Y	E	D	S	A	S	G	A	D	G	K	K

Intensity

(Log 10 base)

Annotations for Glycogen

Description	phosphorylase, muscle form cds.comp143236_c1_seq1\|m.45178 comp143236_c1_seq1\|g.45178 ORF comp143236_c1_seq1\|g.45178 comp143236_c1_seq1\|m.45178 type:complete len:857 (+) comp143236_c1_seq1:98-2668(+)
Gene name
Organism	Unknown unknown

Genbank IDs	GIs	Swiss-Prot Accessions	Swiss-Prot Names	Ensembl	IPI Numbers	GO Categories
none loaded	none loaded	none loaded	none loaded	none loaded	none loaded	none loaded

Peptides

Select All Select None Show Selected Show Unselected Show All	Peptide Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Bar Chart Pie Chart Quick Chart	Peptide Neutral Mass Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	Missed Cleavages Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	Avg. Measured RT Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	Predicted RT Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	RT Score Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart
	APNSFNLR	917.4719	0	22.9952
	VLYPNDNFFEGK	1441.6878	0	29.2960
	TSFDAFPDK	1026.4658	0	25.4150

Chromatograms

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Summary Charts

Peak Areas

Retention Times