15 Jan 2020 18:39:15,506 INFO : Starting to run task 'org.labkey.targetedms.pipeline.TargetedMSImportTask' at location 'webserver-high-priority'
15 Jan 2020 18:39:15,510 INFO : Starting to import Skyline document from matchedmatrixcalcurve_yeastyeast_2019-05-22_reimported.sky.sky.zip
15 Jan 2020 18:39:15,523 INFO : Expanding yeast.protdb
15 Jan 2020 18:39:16,767 INFO : Expanding 20170901_CalCurves_YeastCurve_QUANT.elib
15 Jan 2020 18:39:26,951 INFO : Expanding matchedmatrixcalcurve_yeastyeast_2019-05-22_reimported.sky.skyd
15 Jan 2020 18:40:18,477 INFO : Expanding matchedmatrixcalcurve_yeastyeast_2019-05-22_reimported.sky.zip.view
15 Jan 2020 18:40:18,477 INFO : Expanding matchedmatrixcalcurve_yeastyeast_2019-05-22_reimported.sky.zip
15 Jan 2020 18:40:24,345 INFO : Expanding matchedmatrixcalcurve_yeastyeast_2019-05-22_reimported.sky.skyl
15 Jan 2020 18:40:24,361 INFO : Failed to complete task 'org.labkey.targetedms.pipeline.TargetedMSImportTask'
15 Jan 2020 18:40:24,391 ERROR: zip file /data/labkey/files/Panorama Public/2019/MacCoss - matched matrix cal curves/@files/matchedmatrixcalcurve_yeastyeast_2019-05-22_reimported.sky.sky.zip does not contain a .sky file
org.labkey.api.pipeline.PipelineJobException: zip file /data/labkey/files/Panorama Public/2019/MacCoss - matched matrix cal curves/@files/matchedmatrixcalcurve_yeastyeast_2019-05-22_reimported.sky.sky.zip does not contain a .sky file
at org.labkey.targetedms.pipeline.TargetedMSImportTask.run(TargetedMSImportTask.java:74)
at org.labkey.api.pipeline.PipelineJob.runActiveTask(PipelineJob.java:795)
at org.labkey.api.pipeline.PipelineJob.run(PipelineJob.java:1026)
at org.labkey.pipeline.mule.PipelineJobRunner.run(PipelineJobRunner.java:40)
at jdk.internal.reflect.GeneratedMethodAccessor9930.invoke(Unknown Source)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:567)
at org.mule.impl.model.resolvers.DynamicEntryPoint.invokeMethod(DynamicEntryPoint.java:312)
at org.mule.impl.model.resolvers.DynamicEntryPoint.invoke(DynamicEntryPoint.java:259)
at org.mule.impl.DefaultLifecycleAdapter.intercept(DefaultLifecycleAdapter.java:193)
at org.mule.impl.InterceptorsInvoker.execute(InterceptorsInvoker.java:47)
at org.mule.impl.model.DefaultMuleProxy.run(DefaultMuleProxy.java:470)
at org.mule.impl.work.WorkerContext.run(WorkerContext.java:310)
at edu.emory.mathcs.backport.java.util.concurrent.ThreadPoolExecutor$CallerRunsPolicy.rejectedExecution(ThreadPoolExecutor.java:1486)
at edu.emory.mathcs.backport.java.util.concurrent.ThreadPoolExecutor.reject(ThreadPoolExecutor.java:391)
at edu.emory.mathcs.backport.java.util.concurrent.ThreadPoolExecutor.execute(ThreadPoolExecutor.java:865)
at org.mule.impl.work.ScheduleWorkExecutor.doExecute(ScheduleWorkExecutor.java:39)
at org.mule.impl.work.MuleWorkManager.executeWork(MuleWorkManager.java:277)
at org.mule.impl.work.MuleWorkManager.scheduleWork(MuleWorkManager.java:244)
at org.mule.impl.model.seda.SedaComponent.run(SedaComponent.java:483)
at org.mule.impl.work.WorkerContext.run(WorkerContext.java:310)
at edu.emory.mathcs.backport.java.util.concurrent.ThreadPoolExecutor$Worker.runTask(ThreadPoolExecutor.java:650)
at edu.emory.mathcs.backport.java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:675)
at java.base/java.lang.Thread.run(Thread.java:835)
Caused by: java.io.IOException: zip file /data/labkey/files/Panorama Public/2019/MacCoss - matched matrix cal curves/@files/matchedmatrixcalcurve_yeastyeast_2019-05-22_reimported.sky.sky.zip does not contain a .sky file
at org.labkey.targetedms.SkylineDocImporter.extractIfZip(SkylineDocImporter.java:834)
at org.labkey.targetedms.SkylineDocImporter.importSkylineDoc(SkylineDocImporter.java:257)
at org.labkey.targetedms.SkylineDocImporter.importRun(SkylineDocImporter.java:219)
at org.labkey.targetedms.pipeline.TargetedMSImportTask.run(TargetedMSImportTask.java:65)
... 23 more