Copying experiment: Structural control of regioselectivity in an unusual bacterial acyl-CoA dehydrogenase: /Panorama Public/2019/JBEI - Structural control of regioselectivity in an unusual bacterial acyl-CoA dehydrogenase

Copying experiment: Structural control of regioselectivity in an unusual bacterial acyl-CoA dehydrogenase

JBEI - Structural control of regioselectivity in an unusual bacterial acyl-CoA dehydrogenase

Job Status

Created:

2019-08-14 11:40:09

Modified:

2020-04-21 05:12:56

Email:

vsharma@uw.edu

Status:

COMPLETE

Info:

Description:

Copying experiment: Structural control of regioselectivity in an unusual bacterial acyl-CoA dehydrogenase

File Path:

/data/labkey/files/Panorama Public/2019/JBEI - Structural control of regioselectivity in an unusual bacterial acyl-CoA dehydrogenase/@files/Experiment_815.log

Files:

Experiment_815.log

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14 Aug 2019 11:40:09,222 INFO : Copying experiment "Structural control of regioselectivity in an unusual bacterial acyl-CoA dehydrogenase" from folder /JBEI/Project - Jackie Blake-Hedges/Structural control of regioselectivity in an unusual bacterial acyl-CoA dehydrogenase to /Panorama Public/2019/JBEI - Structural control of regioselectivity in an unusual bacterial acyl-CoA dehydrogenase

14 Aug 2019 11:40:09,223 INFO : =======================================

14 Aug 2019 13:44:37,182 INFO : Starting to run task 'org.labkey.targetedms.pipeline.ExperimentExportTask' at location 'webserver-high-priority'

14 Aug 2019 13:44:37,200 INFO :

14 Aug 2019 13:44:37,201 INFO : Exporting experiment.

14 Aug 2019 13:44:44,506 INFO :

14 Aug 2019 13:44:44,506 INFO : Experiment export completed successfully.

14 Aug 2019 13:44:44,506 INFO : Successfully completed task 'org.labkey.targetedms.pipeline.ExperimentExportTask'

14 Aug 2019 14:10:48,720 INFO : Starting to run task 'org.labkey.targetedms.pipeline.ExperimentImportTask' at location 'webserver-high-priority'

14 Aug 2019 14:10:48,720 INFO :

14 Aug 2019 14:10:48,721 INFO : Importing experiment.

14 Aug 2019 14:10:48,800 INFO : Loading folder properties (folder type, settings and active modules)

14 Aug 2019 14:10:49,040 INFO : Done importing folder properties (folder type, settings and active modules)

14 Aug 2019 14:10:49,048 INFO : Loading etl definitions

14 Aug 2019 14:10:49,054 INFO : Loading wikis

14 Aug 2019 14:10:49,096 INFO : 0 wikis imported

14 Aug 2019 14:10:49,096 INFO : Done importing wikis

14 Aug 2019 14:10:52,647 INFO : Loading xar

14 Aug 2019 14:10:53,390 DEBUG: Finished loading Protocol with LSID 'urn:lsid:uw.edu:Protocol.Folder-5827:TargetedMS.ImportSkyZip'

14 Aug 2019 14:10:53,398 DEBUG: Finished loading Protocol with LSID 'urn:lsid:uw.edu:Protocol.Folder-5827:TargetedMS.ImportSkyZip.Core'

14 Aug 2019 14:10:53,405 DEBUG: Finished loading Protocol with LSID 'urn:lsid:uw.edu:Protocol.Folder-5827:TargetedMS.ImportSkyZip.Output'

14 Aug 2019 14:10:53,405 DEBUG: Protocol import complete

14 Aug 2019 14:10:53,527 DEBUG: Finished loading Experiment with LSID 'urn:lsid:uw.edu:Experiment.Folder-5827:Structural+control+of+regioselectivity+in+an+unusual+bacterial+acyl-CoA+dehydrogenase'

14 Aug 2019 14:10:53,528 DEBUG: Experiment/Run group import complete

14 Aug 2019 14:10:53,677 DEBUG: Protocol action set import complete

14 Aug 2019 14:10:53,738 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-5827:TargetedMS.ImportSkyZip'

14 Aug 2019 14:10:54,113 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:skyd.Folder-5827:07d9ca0e-9e74-1037-a610-3013bb9b251d'

14 Aug 2019 14:10:54,128 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:UploadedFile.Folder-5827:07d9c9fc-9e74-1037-a610-3013bb9b251d'

14 Aug 2019 14:10:54,128 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-5827:TargetedMS.ImportSkyZip.Core'

14 Aug 2019 14:10:54,137 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-5827:TargetedMS.ImportSkyZip.Output'

14 Aug 2019 14:10:54,138 DEBUG: Finished loading ExperimentRun with LSID 'urn:lsid:uw.edu:Run.Folder-5827:07d9ca92-9e74-1037-a610-3013bb9b251d'

14 Aug 2019 14:10:54,155 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-5827:TargetedMS.ImportSkyZip'

14 Aug 2019 14:10:54,193 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:skyd.Folder-5827:273f5ae9-9e73-1037-a610-3013bb9b251d'

14 Aug 2019 14:10:54,222 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:UploadedFile.Folder-5827:273f5ad8-9e73-1037-a610-3013bb9b251d'

14 Aug 2019 14:10:54,222 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-5827:TargetedMS.ImportSkyZip.Core'

14 Aug 2019 14:10:54,229 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-5827:TargetedMS.ImportSkyZip.Output'

14 Aug 2019 14:10:54,230 DEBUG: Finished loading ExperimentRun with LSID 'urn:lsid:uw.edu:Run.Folder-5827:273f5b44-9e73-1037-a610-3013bb9b251d'

14 Aug 2019 14:10:54,247 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-5827:TargetedMS.ImportSkyZip'

14 Aug 2019 14:10:54,274 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:skyd.Folder-5827:273f5c78-9e73-1037-a610-3013bb9b251d'

14 Aug 2019 14:10:54,308 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:UploadedFile.Folder-5827:273f5c5a-9e73-1037-a610-3013bb9b251d'

14 Aug 2019 14:10:54,308 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-5827:TargetedMS.ImportSkyZip.Core'

14 Aug 2019 14:10:54,316 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-5827:TargetedMS.ImportSkyZip.Output'

14 Aug 2019 14:10:54,318 DEBUG: Finished loading ExperimentRun with LSID 'urn:lsid:uw.edu:Run.Folder-5827:273f5e28-9e73-1037-a610-3013bb9b251d'

14 Aug 2019 14:10:54,320 DEBUG: Trying to load data file file:///data/labkey/files/Panorama%20Public/2019/JBEI%20-%20Structural%20control%20of%20regioselectivity%20in%20an%20unusual%20bacterial%20acyl-CoA%20dehydrogenase/@files/export/xar/experiments_and_runs.xar.exploded/Run71435/WT%20assays_set%201_pub%20data_2019-08-11_07-41-51/WT%20assays_set%201_pub%20data.skyd into the system

14 Aug 2019 14:10:54,323 DEBUG: Finished trying to load data file file:///data/labkey/files/Panorama%20Public/2019/JBEI%20-%20Structural%20control%20of%20regioselectivity%20in%20an%20unusual%20bacterial%20acyl-CoA%20dehydrogenase/@files/export/xar/experiments_and_runs.xar.exploded/Run71435/WT%20assays_set%201_pub%20data_2019-08-11_07-41-51/WT%20assays_set%201_pub%20data.skyd into the system

14 Aug 2019 14:10:54,324 DEBUG: Trying to load data file file:///data/labkey/files/Panorama%20Public/2019/JBEI%20-%20Structural%20control%20of%20regioselectivity%20in%20an%20unusual%20bacterial%20acyl-CoA%20dehydrogenase/@files/export/xar/experiments_and_runs.xar.exploded/Run71435/WT%20assays_set%201_pub%20data_2019-08-11_07-41-51.sky.zip into the system

14 Aug 2019 14:10:54,329 INFO : Starting import from WT assays_set 1_pub data_2019-08-11_07-41-51.sky.zip

14 Aug 2019 14:10:54,341 INFO : Starting to import Skyline document from WT assays_set 1_pub data_2019-08-11_07-41-51.sky.zip

14 Aug 2019 14:10:54,344 INFO : Expanding WT assays_set 1_pub data.skyd

14 Aug 2019 14:10:54,397 INFO : Expanding WT assays_set 1_pub data.sky.view

14 Aug 2019 14:10:54,398 INFO : Expanding WT assays_set 1_pub data.sky

14 Aug 2019 14:10:54,408 WARN : The version of this Skyline document is 19.1. This is newer than the highest supported version 4.1

14 Aug 2019 14:10:54,963 INFO : Inserting tr|E9KTG6|E9KTG6_9ACTN_TcsAS98A

14 Aug 2019 14:10:55,418 INFO : Total peptides inserted: 3

14 Aug 2019 14:10:55,580 INFO : Inserting sp|P39135|SFP_BACSU

14 Aug 2019 14:10:55,716 INFO : Total peptides inserted: 1

14 Aug 2019 14:10:55,752 INFO : Inserting Holo-ACP

14 Aug 2019 14:10:56,202 INFO : Total peptides inserted: 2

14 Aug 2019 14:10:56,215 INFO : Inserting Apo-ACP

14 Aug 2019 14:10:56,558 INFO : Total peptides inserted: 2

14 Aug 2019 14:10:56,583 INFO : Inserting 2-pentenoyl-ACP

14 Aug 2019 14:10:56,724 INFO : Total peptides inserted: 2

14 Aug 2019 14:10:56,732 INFO : Inserting 2,4-pentadienoyl-ACP

14 Aug 2019 14:10:56,837 INFO : Total peptides inserted: 2

14 Aug 2019 14:10:56,844 INFO : Inserting Hydroxyvaleroyl-ACP

14 Aug 2019 14:10:56,960 INFO : Total peptides inserted: 2

14 Aug 2019 14:10:57,000 INFO : Inserting Dihydroxyvaleroyl-ACP

14 Aug 2019 14:10:57,121 INFO : Total peptides inserted: 2

14 Aug 2019 14:10:57,129 INFO : Inserting 3-hydroxy-45-pentenoyl-ACP

14 Aug 2019 14:10:57,254 INFO : Total peptides inserted: 2

14 Aug 2019 14:10:57,262 INFO : Inserting 2-hexenoyl-ACP

14 Aug 2019 14:10:57,391 INFO : Total peptides inserted: 2

14 Aug 2019 14:10:57,399 INFO : Inserting Hydroxyhexanoyl-ACP

14 Aug 2019 14:10:57,490 INFO : Total peptides inserted: 2

14 Aug 2019 14:10:57,497 INFO : Inserting 3-hydroxy-45-hexenoyl-ACP

14 Aug 2019 14:10:57,625 INFO : Total peptides inserted: 2

14 Aug 2019 14:10:57,632 INFO : Inserting Dihydroxyhexanoyl-ACP

14 Aug 2019 14:10:57,738 INFO : Total peptides inserted: 2

14 Aug 2019 14:10:57,745 INFO : Inserting 2,4-hexadienoyl-ACP

14 Aug 2019 14:10:57,830 INFO : Total peptides inserted: 2

14 Aug 2019 14:10:57,911 INFO : Inserting tr|E9KTG9|E9KTG9_9ACTN_TcsD

14 Aug 2019 14:10:58,081 INFO : Total peptides inserted: 2

14 Aug 2019 14:10:58,088 INFO : Inserting 2-heptenoyl-ACP

14 Aug 2019 14:10:58,145 INFO : Total peptides inserted: 2

14 Aug 2019 14:10:58,152 INFO : Inserting 2,4-heptadienoyl-ACP

14 Aug 2019 14:10:58,231 INFO : Total peptides inserted: 2

14 Aug 2019 14:10:58,238 INFO : Inserting Hydroxyheptanoyl-ACP

14 Aug 2019 14:10:58,299 INFO : Total peptides inserted: 2

14 Aug 2019 14:10:58,307 INFO : Inserting Dihydroxyheptanoyl-ACP

14 Aug 2019 14:10:58,368 INFO : Total peptides inserted: 2

14 Aug 2019 14:10:58,376 INFO : Inserting 3-hydroxy-45-heptenoyl-ACP

14 Aug 2019 14:10:58,435 INFO : Total peptides inserted: 2

14 Aug 2019 14:10:58,440 WARN : Log file is missing. Proceeding without the log.

14 Aug 2019 14:11:00,081 INFO : Completed import of Skyline document from WT assays_set 1_pub data_2019-08-11_07-41-51.sky.zip

14 Aug 2019 14:11:00,087 DEBUG: Finished trying to load data file file:///data/labkey/files/Panorama%20Public/2019/JBEI%20-%20Structural%20control%20of%20regioselectivity%20in%20an%20unusual%20bacterial%20acyl-CoA%20dehydrogenase/@files/export/xar/experiments_and_runs.xar.exploded/Run71435/WT%20assays_set%201_pub%20data_2019-08-11_07-41-51.sky.zip into the system

14 Aug 2019 14:11:00,088 DEBUG: Trying to load data file file:///data/labkey/files/Panorama%20Public/2019/JBEI%20-%20Structural%20control%20of%20regioselectivity%20in%20an%20unusual%20bacterial%20acyl-CoA%20dehydrogenase/@files/export/xar/experiments_and_runs.xar.exploded/Run71432/Malonate%20assays_pub%20data_2019-08-11_07-36-51/Malonate%20assays_pub%20data.skyd into the system

14 Aug 2019 14:11:00,090 DEBUG: Finished trying to load data file file:///data/labkey/files/Panorama%20Public/2019/JBEI%20-%20Structural%20control%20of%20regioselectivity%20in%20an%20unusual%20bacterial%20acyl-CoA%20dehydrogenase/@files/export/xar/experiments_and_runs.xar.exploded/Run71432/Malonate%20assays_pub%20data_2019-08-11_07-36-51/Malonate%20assays_pub%20data.skyd into the system

14 Aug 2019 14:11:00,091 DEBUG: Trying to load data file file:///data/labkey/files/Panorama%20Public/2019/JBEI%20-%20Structural%20control%20of%20regioselectivity%20in%20an%20unusual%20bacterial%20acyl-CoA%20dehydrogenase/@files/export/xar/experiments_and_runs.xar.exploded/Run71432/Malonate%20assays_pub%20data_2019-08-11_07-36-51.sky.zip into the system

14 Aug 2019 14:11:00,095 INFO : Starting import from Malonate assays_pub data_2019-08-11_07-36-51.sky.zip

14 Aug 2019 14:11:00,100 INFO : Starting to import Skyline document from Malonate assays_pub data_2019-08-11_07-36-51.sky.zip

14 Aug 2019 14:11:00,102 INFO : Expanding Malonate assays_pub data.skyd

14 Aug 2019 14:11:00,117 INFO : Expanding Malonate assays_pub data.sky.view

14 Aug 2019 14:11:00,118 INFO : Expanding Malonate assays_pub data.sky

14 Aug 2019 14:11:00,123 WARN : The version of this Skyline document is 19.1. This is newer than the highest supported version 4.1

14 Aug 2019 14:11:00,326 INFO : Inserting tr|E9KTG6|E9KTG6_9ACTN_TcsAS98A

14 Aug 2019 14:11:00,366 INFO : Total peptides inserted: 3

14 Aug 2019 14:11:00,369 INFO : Inserting sp|P39135|SFP_BACSU

14 Aug 2019 14:11:00,391 INFO : Total peptides inserted: 1

14 Aug 2019 14:11:00,394 INFO : Inserting Holo-ACP

14 Aug 2019 14:11:00,421 INFO : Total peptides inserted: 2

14 Aug 2019 14:11:00,424 INFO : Inserting Apo-ACP

14 Aug 2019 14:11:00,490 INFO : Total peptides inserted: 2

14 Aug 2019 14:11:00,508 INFO : Inserting Valeroyl-ACP

14 Aug 2019 14:11:00,661 INFO : Total peptides inserted: 2

14 Aug 2019 14:11:00,669 INFO : Inserting 2-pentenoyl-ACP

14 Aug 2019 14:11:00,741 INFO : Total peptides inserted: 2

14 Aug 2019 14:11:00,749 INFO : Inserting tr|E9KTG9|E9KTG9_9ACTN_TcsD

14 Aug 2019 14:11:00,826 INFO : Total peptides inserted: 2

14 Aug 2019 14:11:00,849 INFO : Inserting Propylmalonyl-ACP

14 Aug 2019 14:11:00,926 INFO : Total peptides inserted: 2

14 Aug 2019 14:11:00,933 INFO : Inserting Allymalonyl-ACP

14 Aug 2019 14:11:01,009 INFO : Total peptides inserted: 2

14 Aug 2019 14:11:01,013 WARN : Log file is missing. Proceeding without the log.

14 Aug 2019 14:11:02,146 INFO : Completed import of Skyline document from Malonate assays_pub data_2019-08-11_07-36-51.sky.zip

14 Aug 2019 14:11:02,154 DEBUG: Finished trying to load data file file:///data/labkey/files/Panorama%20Public/2019/JBEI%20-%20Structural%20control%20of%20regioselectivity%20in%20an%20unusual%20bacterial%20acyl-CoA%20dehydrogenase/@files/export/xar/experiments_and_runs.xar.exploded/Run71432/Malonate%20assays_pub%20data_2019-08-11_07-36-51.sky.zip into the system

14 Aug 2019 14:11:02,154 DEBUG: Trying to load data file file:///data/labkey/files/Panorama%20Public/2019/JBEI%20-%20Structural%20control%20of%20regioselectivity%20in%20an%20unusual%20bacterial%20acyl-CoA%20dehydrogenase/@files/export/xar/experiments_and_runs.xar.exploded/Run71433/Mutants%20assays_WT-but-val_pub%20data_2019-08-11_07-39-25/Mutants%20assays_WT-but-val_pub%20data.skyd into the system

14 Aug 2019 14:11:02,155 DEBUG: Finished trying to load data file file:///data/labkey/files/Panorama%20Public/2019/JBEI%20-%20Structural%20control%20of%20regioselectivity%20in%20an%20unusual%20bacterial%20acyl-CoA%20dehydrogenase/@files/export/xar/experiments_and_runs.xar.exploded/Run71433/Mutants%20assays_WT-but-val_pub%20data_2019-08-11_07-39-25/Mutants%20assays_WT-but-val_pub%20data.skyd into the system

14 Aug 2019 14:11:02,156 DEBUG: Trying to load data file file:///data/labkey/files/Panorama%20Public/2019/JBEI%20-%20Structural%20control%20of%20regioselectivity%20in%20an%20unusual%20bacterial%20acyl-CoA%20dehydrogenase/@files/export/xar/experiments_and_runs.xar.exploded/Run71433/Mutants%20assays_WT-but-val_pub%20data_2019-08-11_07-39-25.sky.zip into the system

14 Aug 2019 14:11:02,158 INFO : Starting import from Mutants assays_WT-but-val_pub data_2019-08-11_07-39-25.sky.zip

14 Aug 2019 14:11:02,162 INFO : Starting to import Skyline document from Mutants assays_WT-but-val_pub data_2019-08-11_07-39-25.sky.zip

14 Aug 2019 14:11:02,166 INFO : Expanding Mutants assays_WT-but-val_pub data.skyd

14 Aug 2019 14:11:02,268 INFO : Expanding Mutants assays_WT-but-val_pub data.sky.view

14 Aug 2019 14:11:02,268 INFO : Expanding Mutants assays_WT-but-val_pub data.sky

14 Aug 2019 14:11:02,285 WARN : The version of this Skyline document is 19.1. This is newer than the highest supported version 4.1

14 Aug 2019 14:11:02,761 INFO : Inserting tr|E9KTG6|E9KTG6_9ACTN_TcsAS98A

14 Aug 2019 14:11:03,551 INFO : Total peptides inserted: 3

14 Aug 2019 14:11:03,559 INFO : Inserting sp|P39135|SFP_BACSU

14 Aug 2019 14:11:03,863 INFO : Total peptides inserted: 1

14 Aug 2019 14:11:03,870 INFO : Inserting Holo-ACP

14 Aug 2019 14:11:04,445 INFO : Total peptides inserted: 2

14 Aug 2019 14:11:04,453 INFO : Inserting Apo-ACP

14 Aug 2019 14:11:05,745 INFO : Total peptides inserted: 2

14 Aug 2019 14:11:05,752 INFO : Inserting Valeroyl-ACP

14 Aug 2019 14:11:06,263 INFO : Total peptides inserted: 2

14 Aug 2019 14:11:06,270 INFO : Inserting 2-pentenoyl-ACP

14 Aug 2019 14:11:06,789 INFO : Total peptides inserted: 2

14 Aug 2019 14:11:06,796 INFO : Inserting 2,4-pentadienoyl-ACP

14 Aug 2019 14:11:07,358 INFO : Total peptides inserted: 2

14 Aug 2019 14:11:07,365 INFO : Inserting Hydroxyvaleroyl-ACP

14 Aug 2019 14:11:07,883 INFO : Total peptides inserted: 2

14 Aug 2019 14:11:07,890 INFO : Inserting 2-hexenoyl-ACP

14 Aug 2019 14:11:08,389 INFO : Total peptides inserted: 2

14 Aug 2019 14:11:08,396 INFO : Inserting Hydroxyhexanoyl-ACP

14 Aug 2019 14:11:08,910 INFO : Total peptides inserted: 2

14 Aug 2019 14:11:08,917 INFO : Inserting 2,4-hexadienoyl-ACP

14 Aug 2019 14:11:09,473 INFO : Total peptides inserted: 2

14 Aug 2019 14:11:09,480 INFO : Inserting tr|E9KTG9|E9KTG9_9ACTN_TcsD

14 Aug 2019 14:11:10,109 INFO : Total peptides inserted: 2

14 Aug 2019 14:11:10,117 INFO : Inserting 2-heptenoyl-ACP

14 Aug 2019 14:11:10,258 INFO : Total peptides inserted: 2

14 Aug 2019 14:11:10,265 INFO : Inserting 2,4-heptadienoyl-ACP

14 Aug 2019 14:11:10,400 INFO : Total peptides inserted: 2

14 Aug 2019 14:11:10,407 INFO : Inserting Hydroxyheptanoyl-ACP

14 Aug 2019 14:11:10,562 INFO : Total peptides inserted: 2

14 Aug 2019 14:11:10,570 INFO : Inserting Butyryl-ACP

14 Aug 2019 14:11:11,040 INFO : Total peptides inserted: 2

14 Aug 2019 14:11:11,043 INFO : Inserting Crotonyl-ACP

14 Aug 2019 14:11:11,286 INFO : Total peptides inserted: 2

14 Aug 2019 14:11:11,289 INFO : Inserting Hydroxybutyryl-ACP

14 Aug 2019 14:11:11,507 INFO : Total peptides inserted: 2

14 Aug 2019 14:11:11,509 WARN : Log file is missing. Proceeding without the log.

14 Aug 2019 14:11:12,678 INFO : Completed import of Skyline document from Mutants assays_WT-but-val_pub data_2019-08-11_07-39-25.sky.zip

14 Aug 2019 14:11:12,708 DEBUG: Finished trying to load data file file:///data/labkey/files/Panorama%20Public/2019/JBEI%20-%20Structural%20control%20of%20regioselectivity%20in%20an%20unusual%20bacterial%20acyl-CoA%20dehydrogenase/@files/export/xar/experiments_and_runs.xar.exploded/Run71433/Mutants%20assays_WT-but-val_pub%20data_2019-08-11_07-39-25.sky.zip into the system

14 Aug 2019 14:11:12,747 INFO : Done importing xar

14 Aug 2019 14:11:12,750 INFO : Loading pages and webpart properties

14 Aug 2019 14:11:12,955 INFO : Done importing pages and webpart properties

14 Aug 2019 14:11:12,956 INFO :

14 Aug 2019 14:11:12,956 INFO : Experiment import completed successfully.

14 Aug 2019 14:11:12,956 INFO : Successfully completed task 'org.labkey.targetedms.pipeline.ExperimentImportTask'

14 Aug 2019 14:33:58,059 INFO : Starting to run task 'org.labkey.targetedms.pipeline.CopyExperimentFinalTask' at location 'webserver-high-priority'

14 Aug 2019 14:33:58,085 INFO :

14 Aug 2019 14:33:58,086 INFO : Finishing up experiment copy.

14 Aug 2019 14:33:58,088 INFO : Creating a new TargetedMS experiment entry in targetedms.ExperimentAnnotations.

14 Aug 2019 14:33:58,361 INFO : Updating access URL to point to the new copy of the data.

14 Aug 2019 14:33:58,760 INFO : Setting the 'copied' timestamp on the JournalExperiment table.

14 Aug 2019 14:33:58,775 INFO : Removing copy permissions given to journal.

14 Aug 2019 14:33:58,858 INFO : Adding read permissions to all users that are folder admins in the source container.

14 Aug 2019 14:33:58,889 INFO : Setting the TargetedMS folder type to 'Experimental Data'

14 Aug 2019 14:33:58,925 INFO : Updating the 'Raw Data' tab configuration

14 Aug 2019 14:33:58,942 INFO : Updating dataFileUrls for run WT assays_set 1_pub data_2019-08-11_07-41-51.sky.zip; targetedms run ID 72765

14 Aug 2019 14:33:58,943 INFO : Updating dataFileUrl...

14 Aug 2019 14:33:58,943 INFO : from: file:///data/labkey/files/Panorama%20Public/2019/JBEI%20-%20Structural%20control%20of%20regioselectivity%20in%20an%20unusual%20bacterial%20acyl-CoA%20dehydrogenase/@files/export/xar/experiments_and_runs.xar.exploded/Run71435/WT%20assays_set%201_pub%20data_2019-08-11_07-41-51.sky.zip

14 Aug 2019 14:33:58,944 INFO : to: file:///data/labkey/files/Panorama%20Public/2019/JBEI%20-%20Structural%20control%20of%20regioselectivity%20in%20an%20unusual%20bacterial%20acyl-CoA%20dehydrogenase/@files/WT%20assays_set%201_pub%20data_2019-08-11_07-41-51.sky.zip

14 Aug 2019 14:33:58,979 INFO : Updating dataFileUrl...

14 Aug 2019 14:33:58,979 INFO : from: file:///data/labkey/files/Panorama%20Public/2019/JBEI%20-%20Structural%20control%20of%20regioselectivity%20in%20an%20unusual%20bacterial%20acyl-CoA%20dehydrogenase/@files/export/xar/experiments_and_runs.xar.exploded/Run71435/WT%20assays_set%201_pub%20data_2019-08-11_07-41-51/WT%20assays_set%201_pub%20data.skyd

14 Aug 2019 14:33:58,980 INFO : to: file:///data/labkey/files/Panorama%20Public/2019/JBEI%20-%20Structural%20control%20of%20regioselectivity%20in%20an%20unusual%20bacterial%20acyl-CoA%20dehydrogenase/@files/WT%20assays_set%201_pub%20data_2019-08-11_07-41-51/WT%20assays_set%201_pub%20data.skyd

14 Aug 2019 14:33:59,048 INFO : Updating dataFileUrls for run Malonate assays_pub data_2019-08-11_07-36-51.sky.zip; targetedms run ID 72766

14 Aug 2019 14:33:59,049 INFO : Updating dataFileUrl...

14 Aug 2019 14:33:59,049 INFO : from: file:///data/labkey/files/Panorama%20Public/2019/JBEI%20-%20Structural%20control%20of%20regioselectivity%20in%20an%20unusual%20bacterial%20acyl-CoA%20dehydrogenase/@files/export/xar/experiments_and_runs.xar.exploded/Run71432/Malonate%20assays_pub%20data_2019-08-11_07-36-51.sky.zip

14 Aug 2019 14:33:59,049 INFO : to: file:///data/labkey/files/Panorama%20Public/2019/JBEI%20-%20Structural%20control%20of%20regioselectivity%20in%20an%20unusual%20bacterial%20acyl-CoA%20dehydrogenase/@files/Malonate%20assays_pub%20data_2019-08-11_07-36-51.sky.zip

14 Aug 2019 14:33:59,056 INFO : Updating dataFileUrl...

14 Aug 2019 14:33:59,056 INFO : from: file:///data/labkey/files/Panorama%20Public/2019/JBEI%20-%20Structural%20control%20of%20regioselectivity%20in%20an%20unusual%20bacterial%20acyl-CoA%20dehydrogenase/@files/export/xar/experiments_and_runs.xar.exploded/Run71432/Malonate%20assays_pub%20data_2019-08-11_07-36-51/Malonate%20assays_pub%20data.skyd

14 Aug 2019 14:33:59,057 INFO : to: file:///data/labkey/files/Panorama%20Public/2019/JBEI%20-%20Structural%20control%20of%20regioselectivity%20in%20an%20unusual%20bacterial%20acyl-CoA%20dehydrogenase/@files/Malonate%20assays_pub%20data_2019-08-11_07-36-51/Malonate%20assays_pub%20data.skyd

14 Aug 2019 14:33:59,066 INFO : Updating dataFileUrls for run Mutants assays_WT-but-val_pub data_2019-08-11_07-39-25.sky.zip; targetedms run ID 72767

14 Aug 2019 14:33:59,067 INFO : Updating dataFileUrl...

14 Aug 2019 14:33:59,067 INFO : from: file:///data/labkey/files/Panorama%20Public/2019/JBEI%20-%20Structural%20control%20of%20regioselectivity%20in%20an%20unusual%20bacterial%20acyl-CoA%20dehydrogenase/@files/export/xar/experiments_and_runs.xar.exploded/Run71433/Mutants%20assays_WT-but-val_pub%20data_2019-08-11_07-39-25.sky.zip

14 Aug 2019 14:33:59,068 INFO : to: file:///data/labkey/files/Panorama%20Public/2019/JBEI%20-%20Structural%20control%20of%20regioselectivity%20in%20an%20unusual%20bacterial%20acyl-CoA%20dehydrogenase/@files/Mutants%20assays_WT-but-val_pub%20data_2019-08-11_07-39-25.sky.zip

14 Aug 2019 14:33:59,089 INFO : Updating dataFileUrl...

14 Aug 2019 14:33:59,089 INFO : from: file:///data/labkey/files/Panorama%20Public/2019/JBEI%20-%20Structural%20control%20of%20regioselectivity%20in%20an%20unusual%20bacterial%20acyl-CoA%20dehydrogenase/@files/export/xar/experiments_and_runs.xar.exploded/Run71433/Mutants%20assays_WT-but-val_pub%20data_2019-08-11_07-39-25/Mutants%20assays_WT-but-val_pub%20data.skyd

14 Aug 2019 14:33:59,089 INFO : to: file:///data/labkey/files/Panorama%20Public/2019/JBEI%20-%20Structural%20control%20of%20regioselectivity%20in%20an%20unusual%20bacterial%20acyl-CoA%20dehydrogenase/@files/Mutants%20assays_WT-but-val_pub%20data_2019-08-11_07-39-25/Mutants%20assays_WT-but-val_pub%20data.skyd

14 Aug 2019 14:33:59,170 INFO : Successfully completed task 'org.labkey.targetedms.pipeline.CopyExperimentFinalTask'