02 Oct 2018 23:21:08,421 INFO : Copying experiment "Low-density lipoprotein receptor-related protein 1 (LRP1)-derived peptides protect against aggregation of LDL and cholesterol loading of vascular cells. Molecular and Cellular basis for antiatherosclerotic efficacy" from folder /UPF - CRG/ApoB100-2018 to /Panorama Public/2018/UPF CRG - ApoB100-2018

02 Oct 2018 23:21:08,421 INFO : =======================================

02 Oct 2018 23:21:17,146 INFO : Starting to run task 'org.labkey.targetedms.pipeline.ExperimentExportTask' at location 'webserver'

02 Oct 2018 23:21:17,147 INFO : 

02 Oct 2018 23:21:17,147 INFO : Exporting experiment.

02 Oct 2018 23:21:36,278 INFO : 

02 Oct 2018 23:21:36,278 INFO : Experiment export completed successfully.

02 Oct 2018 23:21:36,278 INFO : Successfully completed task 'org.labkey.targetedms.pipeline.ExperimentExportTask'

02 Oct 2018 23:21:36,301 INFO : Starting to run task 'org.labkey.targetedms.pipeline.ExperimentImportTask' at location 'webserver'

02 Oct 2018 23:21:36,302 INFO : 

02 Oct 2018 23:21:36,302 INFO : Importing experiment.

02 Oct 2018 23:21:36,360 INFO : Loading folder properties (folder type, settings and active modules)

02 Oct 2018 23:21:36,485 INFO : Done importing folder properties (folder type, settings and active modules)

02 Oct 2018 23:21:36,491 INFO : Loading container specific module properties

02 Oct 2018 23:21:36,501 INFO : Done importing container specific module properties

02 Oct 2018 23:21:36,541 INFO : Loading xar

02 Oct 2018 23:21:36,872 DEBUG: Finished loading Protocol with LSID 'urn:lsid:uw.edu:Protocol.Folder-4608:TargetedMS.ImportSkyZip'

02 Oct 2018 23:21:36,880 DEBUG: Finished loading Protocol with LSID 'urn:lsid:uw.edu:Protocol.Folder-4608:TargetedMS.ImportSkyZip.Core'

02 Oct 2018 23:21:36,888 DEBUG: Finished loading Protocol with LSID 'urn:lsid:uw.edu:Protocol.Folder-4608:TargetedMS.ImportSkyZip.Output'

02 Oct 2018 23:21:36,888 DEBUG: Protocol import complete

02 Oct 2018 23:21:36,899 DEBUG: Finished loading Experiment with LSID 'urn:lsid:uw.edu:Experiment.Folder-4608:Low-density+lipoprotein+receptor-related+protein+1+%28LRP1%29-derived+peptides+protect+against+aggregation+of+LDL+and+cholesterol+loading+of+vascular+cells.+Molecular+and+Cellular+basis+for+antiatheros...'

02 Oct 2018 23:21:36,899 DEBUG: Experiment/Run group import complete

02 Oct 2018 23:21:37,055 DEBUG: Protocol action set import complete

02 Oct 2018 23:21:37,110 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-4608:TargetedMS.ImportSkyZip'

02 Oct 2018 23:21:37,222 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:UploadedFile.Folder-4608:156ef2a1-a7b4-1036-a72c-3013bb9b911c'

02 Oct 2018 23:21:37,223 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-4608:TargetedMS.ImportSkyZip.Core'

02 Oct 2018 23:21:37,231 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-4608:TargetedMS.ImportSkyZip.Output'

02 Oct 2018 23:21:37,233 DEBUG: Finished loading ExperimentRun with LSID 'urn:lsid:uw.edu:Run.Folder-4608:05d6e0a3-a7b6-1036-a72c-3013bb9b911c'

02 Oct 2018 23:21:37,235 DEBUG: Trying to load data file file:///data/labkey/files/Panorama%20Public/2018/UPF%20CRG%20-%20ApoB100-2018/@files/export/xar/experiments_and_runs.xar.exploded/Run40065/analysis-apoB_2018-10-01_16-39-01.sky.zip into the system

02 Oct 2018 23:21:37,239 INFO : Starting import from analysis-apoB_2018-10-01_16-39-01.sky.zip

02 Oct 2018 23:21:37,255 INFO : Starting to import Skyline document from analysis-apoB_2018-10-01_16-39-01.sky.zip

02 Oct 2018 23:21:37,255 INFO : Expanding ApoB.blib

02 Oct 2018 23:21:37,309 INFO : Expanding analysis-apoB.skyd

02 Oct 2018 23:21:37,581 INFO : Expanding analysis-apoB.sky.view

02 Oct 2018 23:21:37,582 INFO : Expanding analysis-apoB.sky

02 Oct 2018 23:21:37,622 WARN : The version of this Skyline document is 4.12. This is newer than the highest supported version 4.1

02 Oct 2018 23:21:38,216 INFO : Inserting sp|P04114|APOB_HUMAN

02 Oct 2018 23:21:57,810 INFO : Completed import of Skyline document from analysis-apoB_2018-10-01_16-39-01.sky.zip

02 Oct 2018 23:21:57,816 DEBUG: Finished trying to load data file file:///data/labkey/files/Panorama%20Public/2018/UPF%20CRG%20-%20ApoB100-2018/@files/export/xar/experiments_and_runs.xar.exploded/Run40065/analysis-apoB_2018-10-01_16-39-01.sky.zip into the system

02 Oct 2018 23:21:57,827 INFO : Done importing xar

02 Oct 2018 23:21:57,831 INFO : Loading wikis

02 Oct 2018 23:21:57,836 INFO : 0 wikis imported

02 Oct 2018 23:21:57,836 INFO : Done importing wikis

02 Oct 2018 23:22:06,729 INFO : Loading pages and webpart properties

02 Oct 2018 23:22:06,806 INFO : Done importing pages and webpart properties

02 Oct 2018 23:22:06,806 INFO : 

02 Oct 2018 23:22:06,806 INFO : Experiment import completed successfully.

02 Oct 2018 23:22:06,806 INFO : Successfully completed task 'org.labkey.targetedms.pipeline.ExperimentImportTask'

02 Oct 2018 23:22:06,832 INFO : Starting to run task 'org.labkey.targetedms.pipeline.CopyExperimentFinalTask' at location 'webserver'

02 Oct 2018 23:22:06,833 INFO : 

02 Oct 2018 23:22:06,833 INFO : Finishing up experiment copy.

02 Oct 2018 23:22:06,835 INFO : Creating a new TargetedMS experiment entry in targetedms.ExperimentAnnotations.

02 Oct 2018 23:22:06,869 INFO : Updating access URL to point to the new copy of the data.

02 Oct 2018 23:22:07,884 INFO : Successfully completed task 'org.labkey.targetedms.pipeline.CopyExperimentFinalTask'