05 Dec 2018 10:57:14,962 INFO : Copying experiment "Multiplex assay for quantification of acute phase proteins and immunoglobulin A in dried blood spots" from folder /U of Masaryk - RECETOX/Vidova et al. J. Proteome Res. 2018_supplementary data to /Panorama Public/2018/U. Masaryk-Vidova et al. JPR.2018
05 Dec 2018 10:57:14,962 INFO : =======================================
05 Dec 2018 10:57:15,048 INFO : Starting to run task 'org.labkey.targetedms.pipeline.ExperimentExportTask' at location 'webserver'
05 Dec 2018 10:57:15,050 INFO :
05 Dec 2018 10:57:15,051 INFO : Exporting experiment.
05 Dec 2018 10:57:25,487 INFO :
05 Dec 2018 10:57:25,487 INFO : Experiment export completed successfully.
05 Dec 2018 10:57:25,488 INFO : Successfully completed task 'org.labkey.targetedms.pipeline.ExperimentExportTask'
05 Dec 2018 10:57:25,499 INFO : Starting to run task 'org.labkey.targetedms.pipeline.ExperimentImportTask' at location 'webserver'
05 Dec 2018 10:57:25,499 INFO :
05 Dec 2018 10:57:25,499 INFO : Importing experiment.
05 Dec 2018 10:57:25,503 INFO : Loading folder properties (folder type, settings and active modules)
05 Dec 2018 10:57:25,727 INFO : Done importing folder properties (folder type, settings and active modules)
05 Dec 2018 10:57:25,730 INFO : Loading container specific module properties
05 Dec 2018 10:57:25,740 INFO : Done importing container specific module properties
05 Dec 2018 10:57:25,743 INFO : Loading xar
05 Dec 2018 10:57:27,059 DEBUG: Finished loading Protocol with LSID 'urn:lsid:uw.edu:Protocol.Folder-4791:TargetedMS.ImportSkyZip'
05 Dec 2018 10:57:27,064 DEBUG: Finished loading Protocol with LSID 'urn:lsid:uw.edu:Protocol.Folder-4791:TargetedMS.ImportSkyZip.Core'
05 Dec 2018 10:57:27,069 DEBUG: Finished loading Protocol with LSID 'urn:lsid:uw.edu:Protocol.Folder-4791:TargetedMS.ImportSkyZip.Output'
05 Dec 2018 10:57:27,069 DEBUG: Protocol import complete
05 Dec 2018 10:57:27,071 DEBUG: Finished loading Experiment with LSID 'urn:lsid:uw.edu:Experiment.Folder-4791:Multiplex+assay+for+quantification+of+acute+phase+proteins+and+immunoglobulin+A+in+dried+blood+spots'
05 Dec 2018 10:57:27,071 DEBUG: Experiment/Run group import complete
05 Dec 2018 10:57:27,106 DEBUG: Protocol action set import complete
05 Dec 2018 10:57:27,135 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-4791:TargetedMS.ImportSkyZip'
05 Dec 2018 10:57:27,222 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:UploadedFile.Folder-4791:549167db-c0b2-1036-bb6c-3013bb9b852c'
05 Dec 2018 10:57:27,223 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-4791:TargetedMS.ImportSkyZip.Core'
05 Dec 2018 10:57:27,227 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-4791:TargetedMS.ImportSkyZip.Output'
05 Dec 2018 10:57:27,228 DEBUG: Finished loading ExperimentRun with LSID 'urn:lsid:uw.edu:Run.Folder-4791:54916894-c0b2-1036-bb6c-3013bb9b852c'
05 Dec 2018 10:57:27,238 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-4791:TargetedMS.ImportSkyZip'
05 Dec 2018 10:57:27,249 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:UploadedFile.Folder-4791:54916aa0-c0b2-1036-bb6c-3013bb9b852c'
05 Dec 2018 10:57:27,249 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-4791:TargetedMS.ImportSkyZip.Core'
05 Dec 2018 10:57:27,253 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-4791:TargetedMS.ImportSkyZip.Output'
05 Dec 2018 10:57:27,254 DEBUG: Finished loading ExperimentRun with LSID 'urn:lsid:uw.edu:Run.Folder-4791:54916ad6-c0b2-1036-bb6c-3013bb9b852c'
05 Dec 2018 10:57:27,264 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-4791:TargetedMS.ImportSkyZip'
05 Dec 2018 10:57:27,275 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:UploadedFile.Folder-4791:54916c58-c0b2-1036-bb6c-3013bb9b852c'
05 Dec 2018 10:57:27,275 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-4791:TargetedMS.ImportSkyZip.Core'
05 Dec 2018 10:57:27,278 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-4791:TargetedMS.ImportSkyZip.Output'
05 Dec 2018 10:57:27,280 DEBUG: Finished loading ExperimentRun with LSID 'urn:lsid:uw.edu:Run.Folder-4791:54916c8c-c0b2-1036-bb6c-3013bb9b852c'
05 Dec 2018 10:57:27,290 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-4791:TargetedMS.ImportSkyZip'
05 Dec 2018 10:57:27,301 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:UploadedFile.Folder-4791:54916d67-c0b2-1036-bb6c-3013bb9b852c'
05 Dec 2018 10:57:27,301 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-4791:TargetedMS.ImportSkyZip.Core'
05 Dec 2018 10:57:27,304 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-4791:TargetedMS.ImportSkyZip.Output'
05 Dec 2018 10:57:27,305 DEBUG: Finished loading ExperimentRun with LSID 'urn:lsid:uw.edu:Run.Folder-4791:54916d85-c0b2-1036-bb6c-3013bb9b852c'
05 Dec 2018 10:57:27,315 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-4791:TargetedMS.ImportSkyZip'
05 Dec 2018 10:57:27,352 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:UploadedFile.Folder-4791:f2bd9ed6-c0bd-1036-bb6c-3013bb9b852c'
05 Dec 2018 10:57:27,352 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-4791:TargetedMS.ImportSkyZip.Core'
05 Dec 2018 10:57:27,356 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-4791:TargetedMS.ImportSkyZip.Output'
05 Dec 2018 10:57:27,357 DEBUG: Finished loading ExperimentRun with LSID 'urn:lsid:uw.edu:Run.Folder-4791:f2bd9fee-c0bd-1036-bb6c-3013bb9b852c'
05 Dec 2018 10:57:27,374 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-4791:TargetedMS.ImportSkyZip'
05 Dec 2018 10:57:27,386 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:UploadedFile.Folder-4791:f2bda236-c0bd-1036-bb6c-3013bb9b852c'
05 Dec 2018 10:57:27,386 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-4791:TargetedMS.ImportSkyZip.Core'
05 Dec 2018 10:57:27,389 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-4791:TargetedMS.ImportSkyZip.Output'
05 Dec 2018 10:57:27,390 DEBUG: Finished loading ExperimentRun with LSID 'urn:lsid:uw.edu:Run.Folder-4791:f2bda28f-c0bd-1036-bb6c-3013bb9b852c'
05 Dec 2018 10:57:27,400 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-4791:TargetedMS.ImportSkyZip'
05 Dec 2018 10:57:27,411 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:UploadedFile.Folder-4791:f2bda4a8-c0bd-1036-bb6c-3013bb9b852c'
05 Dec 2018 10:57:27,411 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-4791:TargetedMS.ImportSkyZip.Core'
05 Dec 2018 10:57:27,416 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-4791:TargetedMS.ImportSkyZip.Output'
05 Dec 2018 10:57:27,417 DEBUG: Finished loading ExperimentRun with LSID 'urn:lsid:uw.edu:Run.Folder-4791:f2bda550-c0bd-1036-bb6c-3013bb9b852c'
05 Dec 2018 10:57:27,432 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-4791:TargetedMS.ImportSkyZip'
05 Dec 2018 10:57:27,447 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:UploadedFile.Folder-4791:f2bda6ab-c0bd-1036-bb6c-3013bb9b852c'
05 Dec 2018 10:57:27,448 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-4791:TargetedMS.ImportSkyZip.Core'
05 Dec 2018 10:57:27,452 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-4791:TargetedMS.ImportSkyZip.Output'
05 Dec 2018 10:57:27,454 DEBUG: Finished loading ExperimentRun with LSID 'urn:lsid:uw.edu:Run.Folder-4791:f2bda6f4-c0bd-1036-bb6c-3013bb9b852c'
05 Dec 2018 10:57:27,481 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-4791:TargetedMS.ImportSkyZip'
05 Dec 2018 10:57:27,495 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:UploadedFile.Folder-4791:f2bda81a-c0bd-1036-bb6c-3013bb9b852c'
05 Dec 2018 10:57:27,496 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-4791:TargetedMS.ImportSkyZip.Core'
05 Dec 2018 10:57:27,500 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-4791:TargetedMS.ImportSkyZip.Output'
05 Dec 2018 10:57:27,502 DEBUG: Finished loading ExperimentRun with LSID 'urn:lsid:uw.edu:Run.Folder-4791:f2bda8a6-c0bd-1036-bb6c-3013bb9b852c'
05 Dec 2018 10:57:27,517 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-4791:TargetedMS.ImportSkyZip'
05 Dec 2018 10:57:27,532 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:UploadedFile.Folder-4791:5491633f-c0b2-1036-bb6c-3013bb9b852c'
05 Dec 2018 10:57:27,532 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-4791:TargetedMS.ImportSkyZip.Core'
05 Dec 2018 10:57:27,537 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-4791:TargetedMS.ImportSkyZip.Output'
05 Dec 2018 10:57:27,538 DEBUG: Finished loading ExperimentRun with LSID 'urn:lsid:uw.edu:Run.Folder-4791:5491637a-c0b2-1036-bb6c-3013bb9b852c'
05 Dec 2018 10:57:27,553 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-4791:TargetedMS.ImportSkyZip'
05 Dec 2018 10:57:27,568 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:UploadedFile.Folder-4791:5491697e-c0b2-1036-bb6c-3013bb9b852c'
05 Dec 2018 10:57:27,568 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-4791:TargetedMS.ImportSkyZip.Core'
05 Dec 2018 10:57:27,573 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-4791:TargetedMS.ImportSkyZip.Output'
05 Dec 2018 10:57:27,574 DEBUG: Finished loading ExperimentRun with LSID 'urn:lsid:uw.edu:Run.Folder-4791:549169c3-c0b2-1036-bb6c-3013bb9b852c'
05 Dec 2018 10:57:27,602 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-4791:TargetedMS.ImportSkyZip'
05 Dec 2018 10:57:27,664 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:UploadedFile.Folder-4791:2142838e-c0bb-1036-bb6c-3013bb9b852c'
05 Dec 2018 10:57:27,665 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-4791:TargetedMS.ImportSkyZip.Core'
05 Dec 2018 10:57:27,670 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-4791:TargetedMS.ImportSkyZip.Output'
05 Dec 2018 10:57:27,672 DEBUG: Finished loading ExperimentRun with LSID 'urn:lsid:uw.edu:Run.Folder-4791:f2bd9c80-c0bd-1036-bb6c-3013bb9b852c'
05 Dec 2018 10:57:27,674 DEBUG: Trying to load data file file:///data/labkey/files/Panorama%20Public/2018/U.%20Masaryk-Vidova%20et%20al.%20JPR.2018/@files/export/xar/experiments_and_runs.xar.exploded/Run42175/Protein%20quantification%20in%20DBS%20from%2015%20volunteers%20Ambic%20extraction%206%20months%20repeatibility_2018-11-02_10-50-44.sky.zip into the system
05 Dec 2018 10:57:27,677 INFO : Starting import from Protein quantification in DBS from 15 volunteers Ambic extraction 6 months repeatibility_2018-11-02_10-50-44.sky.zip
05 Dec 2018 10:57:27,692 INFO : Starting to import Skyline document from Protein quantification in DBS from 15 volunteers Ambic extraction 6 months repeatibility_2018-11-02_10-50-44.sky.zip
05 Dec 2018 10:57:27,693 INFO : Expanding Protein quantification in DBS from 15 volunteers Ambic extraction 6 months repeatibility.skyd
05 Dec 2018 10:57:28,261 INFO : Expanding Protein quantification in DBS from 15 volunteers Ambic extraction 6 months repeatibility.sky.view
05 Dec 2018 10:57:28,262 INFO : Expanding Protein quantification in DBS from 15 volunteers Ambic extraction 6 months repeatibility.sky
05 Dec 2018 10:57:28,295 WARN : The version of this Skyline document is 4.2. This is newer than the highest supported version 4.1
05 Dec 2018 10:57:28,836 INFO : Inserting P01876
05 Dec 2018 10:57:30,732 INFO : Inserting P01009
05 Dec 2018 10:57:32,398 INFO : Inserting P02741
05 Dec 2018 10:57:33,258 INFO : Inserting P02763
05 Dec 2018 10:57:34,699 INFO : Inserting P0DJI8
05 Dec 2018 10:57:38,879 INFO : Inserting P0DJI9
05 Dec 2018 10:57:40,928 INFO : Inserting P19652
05 Dec 2018 10:57:42,322 INFO : Inserting P35542
05 Dec 2018 10:57:45,890 INFO : Completed import of Skyline document from Protein quantification in DBS from 15 volunteers Ambic extraction 6 months repeatibility_2018-11-02_10-50-44.sky.zip
05 Dec 2018 10:57:45,903 DEBUG: Finished trying to load data file file:///data/labkey/files/Panorama%20Public/2018/U.%20Masaryk-Vidova%20et%20al.%20JPR.2018/@files/export/xar/experiments_and_runs.xar.exploded/Run42175/Protein%20quantification%20in%20DBS%20from%2015%20volunteers%20Ambic%20extraction%206%20months%20repeatibility_2018-11-02_10-50-44.sky.zip into the system
05 Dec 2018 10:57:45,904 DEBUG: Trying to load data file file:///data/labkey/files/Panorama%20Public/2018/U.%20Masaryk-Vidova%20et%20al.%20JPR.2018/@files/export/xar/experiments_and_runs.xar.exploded/Run42177/Intera%20nd%20intra%20day%20precision_2018-11-02_10-53-07.sky.zip into the system
05 Dec 2018 10:57:45,907 INFO : Starting import from Intera nd intra day precision_2018-11-02_10-53-07.sky.zip
05 Dec 2018 10:57:45,914 INFO : Starting to import Skyline document from Intera nd intra day precision_2018-11-02_10-53-07.sky.zip
05 Dec 2018 10:57:45,914 INFO : Expanding Intera nd intra day precision.skyd
05 Dec 2018 10:57:45,980 INFO : Expanding Intera nd intra day precision.sky.view
05 Dec 2018 10:57:45,981 INFO : Expanding Intera nd intra day precision.sky
05 Dec 2018 10:57:45,989 WARN : The version of this Skyline document is 4.2. This is newer than the highest supported version 4.1
05 Dec 2018 10:57:46,130 INFO : Inserting P01876
05 Dec 2018 10:57:46,532 INFO : Inserting P01009
05 Dec 2018 10:57:46,884 INFO : Inserting P02741
05 Dec 2018 10:57:47,190 INFO : Inserting P02763
05 Dec 2018 10:57:47,498 INFO : Inserting P0DJI8
05 Dec 2018 10:57:48,132 INFO : Inserting P0DJI9
05 Dec 2018 10:57:48,414 INFO : Inserting P19652
05 Dec 2018 10:57:48,716 INFO : Inserting P35542
05 Dec 2018 10:57:50,995 INFO : Completed import of Skyline document from Intera nd intra day precision_2018-11-02_10-53-07.sky.zip
05 Dec 2018 10:57:51,000 DEBUG: Finished trying to load data file file:///data/labkey/files/Panorama%20Public/2018/U.%20Masaryk-Vidova%20et%20al.%20JPR.2018/@files/export/xar/experiments_and_runs.xar.exploded/Run42177/Intera%20nd%20intra%20day%20precision_2018-11-02_10-53-07.sky.zip into the system
05 Dec 2018 10:57:51,000 DEBUG: Trying to load data file file:///data/labkey/files/Panorama%20Public/2018/U.%20Masaryk-Vidova%20et%20al.%20JPR.2018/@files/export/xar/experiments_and_runs.xar.exploded/Run42178/Optimization%20of%20digestion%20time_2018-11-02_10-54-31.sky.zip into the system
05 Dec 2018 10:57:51,001 INFO : Starting import from Optimization of digestion time_2018-11-02_10-54-31.sky.zip
05 Dec 2018 10:57:51,004 INFO : Starting to import Skyline document from Optimization of digestion time_2018-11-02_10-54-31.sky.zip
05 Dec 2018 10:57:51,005 INFO : Expanding Optimization of digestion time.skyd
05 Dec 2018 10:57:51,055 INFO : Expanding Optimization of digestion time.sky.view
05 Dec 2018 10:57:51,055 INFO : Expanding Optimization of digestion time.sky
05 Dec 2018 10:57:51,061 WARN : The version of this Skyline document is 4.2. This is newer than the highest supported version 4.1
05 Dec 2018 10:57:51,157 INFO : Inserting P01876
05 Dec 2018 10:57:51,440 INFO : Inserting P01009
05 Dec 2018 10:57:51,670 INFO : Inserting P02741
05 Dec 2018 10:57:51,852 INFO : Inserting P02763
05 Dec 2018 10:57:52,285 INFO : Inserting P0DJI8
05 Dec 2018 10:57:53,177 INFO : Inserting P0DJI9
05 Dec 2018 10:57:53,575 INFO : Inserting P19652
05 Dec 2018 10:57:54,020 INFO : Inserting P35542
05 Dec 2018 10:57:54,492 INFO : Completed import of Skyline document from Optimization of digestion time_2018-11-02_10-54-31.sky.zip
05 Dec 2018 10:57:54,496 DEBUG: Finished trying to load data file file:///data/labkey/files/Panorama%20Public/2018/U.%20Masaryk-Vidova%20et%20al.%20JPR.2018/@files/export/xar/experiments_and_runs.xar.exploded/Run42178/Optimization%20of%20digestion%20time_2018-11-02_10-54-31.sky.zip into the system
05 Dec 2018 10:57:54,496 DEBUG: Trying to load data file file:///data/labkey/files/Panorama%20Public/2018/U.%20Masaryk-Vidova%20et%20al.%20JPR.2018/@files/export/xar/experiments_and_runs.xar.exploded/Run42179/SFFSFLGEAFDGAR%20test_2018-11-02_10-55-20.sky.zip into the system
05 Dec 2018 10:57:54,497 INFO : Starting import from SFFSFLGEAFDGAR test_2018-11-02_10-55-20.sky.zip
05 Dec 2018 10:57:54,500 INFO : Starting to import Skyline document from SFFSFLGEAFDGAR test_2018-11-02_10-55-20.sky.zip
05 Dec 2018 10:57:54,501 INFO : Expanding SFFSFLGEAFDGAR test.skyd
05 Dec 2018 10:57:54,511 INFO : Expanding SFFSFLGEAFDGAR test.sky.view
05 Dec 2018 10:57:54,512 INFO : Expanding SFFSFLGEAFDGAR test.sky
05 Dec 2018 10:57:54,514 WARN : The version of this Skyline document is 4.2. This is newer than the highest supported version 4.1
05 Dec 2018 10:57:54,543 INFO : Inserting P01876
05 Dec 2018 10:57:54,607 INFO : Inserting P01009
05 Dec 2018 10:57:54,655 INFO : Inserting P02741
05 Dec 2018 10:57:54,710 INFO : Inserting P02763
05 Dec 2018 10:57:54,756 INFO : Inserting P0DJI8
05 Dec 2018 10:57:54,901 INFO : Inserting P0DJI9
05 Dec 2018 10:57:54,996 INFO : Inserting P19652
05 Dec 2018 10:57:55,088 INFO : Inserting P35542
05 Dec 2018 10:57:57,628 INFO : Completed import of Skyline document from SFFSFLGEAFDGAR test_2018-11-02_10-55-20.sky.zip
05 Dec 2018 10:57:57,638 DEBUG: Finished trying to load data file file:///data/labkey/files/Panorama%20Public/2018/U.%20Masaryk-Vidova%20et%20al.%20JPR.2018/@files/export/xar/experiments_and_runs.xar.exploded/Run42179/SFFSFLGEAFDGAR%20test_2018-11-02_10-55-20.sky.zip into the system
05 Dec 2018 10:57:57,638 DEBUG: Trying to load data file file:///data/labkey/files/Panorama%20Public/2018/U.%20Masaryk-Vidova%20et%20al.%20JPR.2018/@files/export/xar/experiments_and_runs.xar.exploded/Run42188/Calibration%20A1AT1_2018-11-02_12-11-58.sky.zip into the system
05 Dec 2018 10:57:57,642 INFO : Starting import from Calibration A1AT1_2018-11-02_12-11-58.sky.zip
05 Dec 2018 10:57:57,649 INFO : Starting to import Skyline document from Calibration A1AT1_2018-11-02_12-11-58.sky.zip
05 Dec 2018 10:57:57,650 INFO : Expanding Calibration A1AT1.skyd
05 Dec 2018 10:57:57,810 INFO : Expanding Calibration A1AT1.sky.view
05 Dec 2018 10:57:57,811 INFO : Expanding Calibration A1AT1.sky
05 Dec 2018 10:57:57,827 WARN : The version of this Skyline document is 4.2. This is newer than the highest supported version 4.1
05 Dec 2018 10:57:58,107 INFO : Inserting P01876
05 Dec 2018 10:57:58,859 INFO : Inserting P01009
05 Dec 2018 10:57:59,582 INFO : Inserting P02741
05 Dec 2018 10:58:00,177 INFO : Inserting P02763
05 Dec 2018 10:58:00,787 INFO : Inserting P0DJI8
05 Dec 2018 10:58:02,498 INFO : Inserting P0DJI9
05 Dec 2018 10:58:03,692 INFO : Inserting P19652
05 Dec 2018 10:58:04,720 INFO : Inserting P35542
05 Dec 2018 10:58:08,183 INFO : Completed import of Skyline document from Calibration A1AT1_2018-11-02_12-11-58.sky.zip
05 Dec 2018 10:58:08,189 DEBUG: Finished trying to load data file file:///data/labkey/files/Panorama%20Public/2018/U.%20Masaryk-Vidova%20et%20al.%20JPR.2018/@files/export/xar/experiments_and_runs.xar.exploded/Run42188/Calibration%20A1AT1_2018-11-02_12-11-58.sky.zip into the system
05 Dec 2018 10:58:08,190 DEBUG: Trying to load data file file:///data/labkey/files/Panorama%20Public/2018/U.%20Masaryk-Vidova%20et%20al.%20JPR.2018/@files/export/xar/experiments_and_runs.xar.exploded/Run42189/Calibration%20CRP_2018-11-02_12-13-11.sky.zip into the system
05 Dec 2018 10:58:08,193 INFO : Starting import from Calibration CRP_2018-11-02_12-13-11.sky.zip
05 Dec 2018 10:58:08,201 INFO : Starting to import Skyline document from Calibration CRP_2018-11-02_12-13-11.sky.zip
05 Dec 2018 10:58:08,201 INFO : Expanding Calibration CRP.skyd
05 Dec 2018 10:58:08,346 INFO : Expanding Calibration CRP.sky.view
05 Dec 2018 10:58:08,346 INFO : Expanding Calibration CRP.sky
05 Dec 2018 10:58:08,365 WARN : The version of this Skyline document is 4.2. This is newer than the highest supported version 4.1
05 Dec 2018 10:58:08,652 INFO : Inserting P01876
05 Dec 2018 10:58:09,457 INFO : Inserting P01009
05 Dec 2018 10:58:10,089 INFO : Inserting P02741
05 Dec 2018 10:58:10,644 INFO : Inserting P02763
05 Dec 2018 10:58:11,216 INFO : Inserting P0DJI8
05 Dec 2018 10:58:12,597 INFO : Inserting P0DJI9
05 Dec 2018 10:58:13,145 INFO : Inserting P19652
05 Dec 2018 10:58:13,586 INFO : Inserting P35542
05 Dec 2018 10:58:16,387 INFO : Completed import of Skyline document from Calibration CRP_2018-11-02_12-13-11.sky.zip
05 Dec 2018 10:58:16,395 DEBUG: Finished trying to load data file file:///data/labkey/files/Panorama%20Public/2018/U.%20Masaryk-Vidova%20et%20al.%20JPR.2018/@files/export/xar/experiments_and_runs.xar.exploded/Run42189/Calibration%20CRP_2018-11-02_12-13-11.sky.zip into the system
05 Dec 2018 10:58:16,395 DEBUG: Trying to load data file file:///data/labkey/files/Panorama%20Public/2018/U.%20Masaryk-Vidova%20et%20al.%20JPR.2018/@files/export/xar/experiments_and_runs.xar.exploded/Run42190/Calibration%20SAA1+2_2018-11-02_12-14-22.sky.zip into the system
05 Dec 2018 10:58:16,398 INFO : Starting import from Calibration SAA1+2_2018-11-02_12-14-22.sky.zip
05 Dec 2018 10:58:16,403 INFO : Starting to import Skyline document from Calibration SAA1+2_2018-11-02_12-14-22.sky.zip
05 Dec 2018 10:58:16,404 INFO : Expanding Calibration SAA1+2.skyd
05 Dec 2018 10:58:16,693 INFO : Expanding Calibration SAA1+2.sky.view
05 Dec 2018 10:58:16,693 INFO : Expanding Calibration SAA1+2.sky
05 Dec 2018 10:58:16,710 WARN : The version of this Skyline document is 4.2. This is newer than the highest supported version 4.1
05 Dec 2018 10:58:17,055 INFO : Inserting P01876
05 Dec 2018 10:58:17,825 INFO : Inserting P01009
05 Dec 2018 10:58:18,556 INFO : Inserting P02741
05 Dec 2018 10:58:19,014 INFO : Inserting P02763
05 Dec 2018 10:58:19,447 INFO : Inserting P0DJI8
05 Dec 2018 10:58:20,995 INFO : Inserting P0DJI9
05 Dec 2018 10:58:22,017 INFO : Inserting P19652
05 Dec 2018 10:58:22,970 INFO : Inserting P35542
05 Dec 2018 10:58:26,474 INFO : Completed import of Skyline document from Calibration SAA1+2_2018-11-02_12-14-22.sky.zip
05 Dec 2018 10:58:26,482 DEBUG: Finished trying to load data file file:///data/labkey/files/Panorama%20Public/2018/U.%20Masaryk-Vidova%20et%20al.%20JPR.2018/@files/export/xar/experiments_and_runs.xar.exploded/Run42190/Calibration%20SAA1+2_2018-11-02_12-14-22.sky.zip into the system
05 Dec 2018 10:58:26,482 DEBUG: Trying to load data file file:///data/labkey/files/Panorama%20Public/2018/U.%20Masaryk-Vidova%20et%20al.%20JPR.2018/@files/export/xar/experiments_and_runs.xar.exploded/Run42191/Calibration%20SAA4_2018-11-02_12-15-37.sky.zip into the system
05 Dec 2018 10:58:26,485 INFO : Starting import from Calibration SAA4_2018-11-02_12-15-37.sky.zip
05 Dec 2018 10:58:26,490 INFO : Starting to import Skyline document from Calibration SAA4_2018-11-02_12-15-37.sky.zip
05 Dec 2018 10:58:26,491 INFO : Expanding Calibration SAA4.skyd
05 Dec 2018 10:58:26,763 INFO : Expanding Calibration SAA4.sky.view
05 Dec 2018 10:58:26,763 INFO : Expanding Calibration SAA4.sky
05 Dec 2018 10:58:26,785 WARN : The version of this Skyline document is 4.2. This is newer than the highest supported version 4.1
05 Dec 2018 10:58:27,092 INFO : Inserting P01876
05 Dec 2018 10:58:27,702 INFO : Inserting P01009
05 Dec 2018 10:58:28,151 INFO : Inserting P02741
05 Dec 2018 10:58:28,513 INFO : Inserting P02763
05 Dec 2018 10:58:28,936 INFO : Inserting P0DJI8
05 Dec 2018 10:58:30,303 INFO : Inserting P0DJI9
05 Dec 2018 10:58:31,185 INFO : Inserting P19652
05 Dec 2018 10:58:32,034 INFO : Inserting P35542
05 Dec 2018 10:58:35,417 INFO : Completed import of Skyline document from Calibration SAA4_2018-11-02_12-15-37.sky.zip
05 Dec 2018 10:58:35,425 DEBUG: Finished trying to load data file file:///data/labkey/files/Panorama%20Public/2018/U.%20Masaryk-Vidova%20et%20al.%20JPR.2018/@files/export/xar/experiments_and_runs.xar.exploded/Run42191/Calibration%20SAA4_2018-11-02_12-15-37.sky.zip into the system
05 Dec 2018 10:58:35,425 DEBUG: Trying to load data file file:///data/labkey/files/Panorama%20Public/2018/U.%20Masaryk-Vidova%20et%20al.%20JPR.2018/@files/export/xar/experiments_and_runs.xar.exploded/Run42192/Calibration%20in%20SDC_2018-11-02_12-16-42.sky.zip into the system
05 Dec 2018 10:58:35,428 INFO : Starting import from Calibration in SDC_2018-11-02_12-16-42.sky.zip
05 Dec 2018 10:58:35,434 INFO : Starting to import Skyline document from Calibration in SDC_2018-11-02_12-16-42.sky.zip
05 Dec 2018 10:58:35,435 INFO : Expanding Calibration in SDC.skyd
05 Dec 2018 10:58:35,736 INFO : Expanding Calibration in SDC.sky.view
05 Dec 2018 10:58:35,737 INFO : Expanding Calibration in SDC.sky
05 Dec 2018 10:58:35,763 WARN : The version of this Skyline document is 4.2. This is newer than the highest supported version 4.1
05 Dec 2018 10:58:36,147 INFO : Inserting P01876
05 Dec 2018 10:58:37,033 INFO : Inserting P01009
05 Dec 2018 10:58:37,514 INFO : Inserting P02741
05 Dec 2018 10:58:37,984 INFO : Inserting P02763
05 Dec 2018 10:58:38,486 INFO : Inserting P0DJI8
05 Dec 2018 10:58:39,881 INFO : Inserting P0DJI9
05 Dec 2018 10:58:40,798 INFO : Inserting P19652
05 Dec 2018 10:58:41,657 INFO : Inserting P35542
05 Dec 2018 10:58:44,844 INFO : Completed import of Skyline document from Calibration in SDC_2018-11-02_12-16-42.sky.zip
05 Dec 2018 10:58:44,855 DEBUG: Finished trying to load data file file:///data/labkey/files/Panorama%20Public/2018/U.%20Masaryk-Vidova%20et%20al.%20JPR.2018/@files/export/xar/experiments_and_runs.xar.exploded/Run42192/Calibration%20in%20SDC_2018-11-02_12-16-42.sky.zip into the system
05 Dec 2018 10:58:44,855 DEBUG: Trying to load data file file:///data/labkey/files/Panorama%20Public/2018/U.%20Masaryk-Vidova%20et%20al.%20JPR.2018/@files/export/xar/experiments_and_runs.xar.exploded/Run42174/Comparison%20of%203mm%20DBS%20punch%20and%203ul%20liquid%20blood_2018-11-02_10-48-05.sky.zip into the system
05 Dec 2018 10:58:44,859 INFO : Starting import from Comparison of 3mm DBS punch and 3ul liquid blood_2018-11-02_10-48-05.sky.zip
05 Dec 2018 10:58:44,866 INFO : Starting to import Skyline document from Comparison of 3mm DBS punch and 3ul liquid blood_2018-11-02_10-48-05.sky.zip
05 Dec 2018 10:58:44,867 INFO : Expanding Comparison of 3mm DBS punch and 3ul liquid blood.skyd
05 Dec 2018 10:58:44,916 INFO : Expanding Comparison of 3mm DBS punch and 3ul liquid blood.sky.view
05 Dec 2018 10:58:44,916 INFO : Expanding Comparison of 3mm DBS punch and 3ul liquid blood.sky
05 Dec 2018 10:58:44,926 WARN : The version of this Skyline document is 4.2. This is newer than the highest supported version 4.1
05 Dec 2018 10:58:45,044 INFO : Inserting P01876
05 Dec 2018 10:58:45,359 INFO : Inserting P01009
05 Dec 2018 10:58:45,590 INFO : Inserting P02741
05 Dec 2018 10:58:45,812 INFO : Inserting P02763
05 Dec 2018 10:58:46,031 INFO : Inserting P0DJI8
05 Dec 2018 10:58:46,703 INFO : Inserting P0DJI9
05 Dec 2018 10:58:47,120 INFO : Inserting P19652
05 Dec 2018 10:58:47,526 INFO : Inserting P35542
05 Dec 2018 10:58:49,965 INFO : Completed import of Skyline document from Comparison of 3mm DBS punch and 3ul liquid blood_2018-11-02_10-48-05.sky.zip
05 Dec 2018 10:58:49,973 DEBUG: Finished trying to load data file file:///data/labkey/files/Panorama%20Public/2018/U.%20Masaryk-Vidova%20et%20al.%20JPR.2018/@files/export/xar/experiments_and_runs.xar.exploded/Run42174/Comparison%20of%203mm%20DBS%20punch%20and%203ul%20liquid%20blood_2018-11-02_10-48-05.sky.zip into the system
05 Dec 2018 10:58:49,974 DEBUG: Trying to load data file file:///data/labkey/files/Panorama%20Public/2018/U.%20Masaryk-Vidova%20et%20al.%20JPR.2018/@files/export/xar/experiments_and_runs.xar.exploded/Run42176/Protein%20quantification%20in%20DBS%20from%2015%20volunteers%20SDC%20extraction_2018-11-02_10-52-13.sky.zip into the system
05 Dec 2018 10:58:49,977 INFO : Starting import from Protein quantification in DBS from 15 volunteers SDC extraction_2018-11-02_10-52-13.sky.zip
05 Dec 2018 10:58:49,985 INFO : Starting to import Skyline document from Protein quantification in DBS from 15 volunteers SDC extraction_2018-11-02_10-52-13.sky.zip
05 Dec 2018 10:58:49,986 INFO : Expanding Protein quantification in DBS from 15 volunteers SDC extraction.skyd
05 Dec 2018 10:58:50,047 INFO : Expanding Protein quantification in DBS from 15 volunteers SDC extraction.sky.view
05 Dec 2018 10:58:50,048 INFO : Expanding Protein quantification in DBS from 15 volunteers SDC extraction.sky
05 Dec 2018 10:58:50,056 WARN : The version of this Skyline document is 4.2. This is newer than the highest supported version 4.1
05 Dec 2018 10:58:50,247 INFO : Inserting P01876
05 Dec 2018 10:58:50,597 INFO : Inserting P01009
05 Dec 2018 10:58:50,873 INFO : Inserting P02741
05 Dec 2018 10:58:51,108 INFO : Inserting P02763
05 Dec 2018 10:58:51,329 INFO : Inserting P0DJI8
05 Dec 2018 10:58:51,683 INFO : Inserting P0DJI9
05 Dec 2018 10:58:51,887 INFO : Inserting P19652
05 Dec 2018 10:58:52,121 INFO : Inserting P35542
05 Dec 2018 10:58:54,374 INFO : Completed import of Skyline document from Protein quantification in DBS from 15 volunteers SDC extraction_2018-11-02_10-52-13.sky.zip
05 Dec 2018 10:58:54,382 DEBUG: Finished trying to load data file file:///data/labkey/files/Panorama%20Public/2018/U.%20Masaryk-Vidova%20et%20al.%20JPR.2018/@files/export/xar/experiments_and_runs.xar.exploded/Run42176/Protein%20quantification%20in%20DBS%20from%2015%20volunteers%20SDC%20extraction_2018-11-02_10-52-13.sky.zip into the system
05 Dec 2018 10:58:54,383 DEBUG: Trying to load data file file:///data/labkey/files/Panorama%20Public/2018/U.%20Masaryk-Vidova%20et%20al.%20JPR.2018/@files/export/xar/experiments_and_runs.xar.exploded/Run42186/Calibration%20A1AG1+2%20and%20IGHA1_2018-11-02_12-10-57.sky.zip into the system
05 Dec 2018 10:58:54,385 INFO : Starting import from Calibration A1AG1+2 and IGHA1_2018-11-02_12-10-57.sky.zip
05 Dec 2018 10:58:54,390 INFO : Starting to import Skyline document from Calibration A1AG1+2 and IGHA1_2018-11-02_12-10-57.sky.zip
05 Dec 2018 10:58:54,391 INFO : Expanding Calibration A1AG1+2 and IGHA1.skyd
05 Dec 2018 10:58:54,532 INFO : Expanding Calibration A1AG1+2 and IGHA1.sky.view
05 Dec 2018 10:58:54,532 INFO : Expanding Calibration A1AG1+2 and IGHA1.sky
05 Dec 2018 10:58:54,542 WARN : The version of this Skyline document is 4.2. This is newer than the highest supported version 4.1
05 Dec 2018 10:58:54,811 INFO : Inserting P01876
05 Dec 2018 10:58:55,134 INFO : Inserting P01009
05 Dec 2018 10:58:55,271 INFO : Inserting P02741
05 Dec 2018 10:58:55,406 INFO : Inserting P02763
05 Dec 2018 10:58:55,615 INFO : Inserting P0DJI8
05 Dec 2018 10:58:56,037 INFO : Inserting P0DJI9
05 Dec 2018 10:58:56,321 INFO : Inserting P19652
05 Dec 2018 10:58:56,680 INFO : Inserting P35542
05 Dec 2018 10:58:58,902 INFO : Completed import of Skyline document from Calibration A1AG1+2 and IGHA1_2018-11-02_12-10-57.sky.zip
05 Dec 2018 10:58:58,911 DEBUG: Finished trying to load data file file:///data/labkey/files/Panorama%20Public/2018/U.%20Masaryk-Vidova%20et%20al.%20JPR.2018/@files/export/xar/experiments_and_runs.xar.exploded/Run42186/Calibration%20A1AG1+2%20and%20IGHA1_2018-11-02_12-10-57.sky.zip into the system
05 Dec 2018 10:58:59,214 INFO : Done importing xar
05 Dec 2018 10:58:59,220 INFO : Loading wikis
05 Dec 2018 10:58:59,273 INFO : 0 wikis imported
05 Dec 2018 10:58:59,273 INFO : Done importing wikis
05 Dec 2018 10:59:02,967 INFO : Loading pages and webpart properties
05 Dec 2018 10:59:03,046 INFO : Done importing pages and webpart properties
05 Dec 2018 10:59:03,047 INFO :
05 Dec 2018 10:59:03,047 INFO : Experiment import completed successfully.
05 Dec 2018 10:59:03,047 INFO : Successfully completed task 'org.labkey.targetedms.pipeline.ExperimentImportTask'
05 Dec 2018 10:59:03,117 INFO : Starting to run task 'org.labkey.targetedms.pipeline.CopyExperimentFinalTask' at location 'webserver'
05 Dec 2018 10:59:03,117 INFO :
05 Dec 2018 10:59:03,117 INFO : Finishing up experiment copy.
05 Dec 2018 10:59:03,129 INFO : Creating a new TargetedMS experiment entry in targetedms.ExperimentAnnotations.
05 Dec 2018 10:59:03,643 INFO : Updating access URL to point to the new copy of the data.
05 Dec 2018 10:59:04,257 INFO : Successfully completed task 'org.labkey.targetedms.pipeline.CopyExperimentFinalTask'