Skyline document import - BSA_and_PRTC.sky.zip

Method Dev

Job Status

Created: 2021-03-14 13:29:42
Modified: 2021-03-14 13:29:53
Email: vsharma@uw.edu
Status: COMPLETE
Info:
Description: Skyline document import - BSA_and_PRTC.sky.zip
File Path: /data/labkey/files/Panorama Public/2018/MacLean - Baker IMS/Method Dev/@files/BSA_and_PRTC.sky_2021-03-14_13-29-42.log
Files: BSA_and_PRTC.sky_2021-03-14_13-29-42.log
Completed Runs: BSA_and_PRTC.sky.zip

Log File


14 Mar 2021 13:29:42,811 INFO : Starting to run task 'org.labkey.targetedms.pipeline.TargetedMSImportTask' at location 'webserver-high-priority'
14 Mar 2021 13:29:42,837 INFO : Starting to import Skyline document from BSA_and_PRTC.sky.zip
14 Mar 2021 13:29:42,840 INFO : Expanding yeastbov6.protdb
14 Mar 2021 13:29:43,930 INFO : Expanding Q_2014_0522_ASMS2014.blib
14 Mar 2021 13:29:43,976 INFO : Expanding BSA_and_PRTC.skyd
14 Mar 2021 13:29:44,206 INFO : Expanding BSA_and_PRTC.sky.view
14 Mar 2021 13:29:44,211 INFO : Expanding BSA_and_PRTC.sky
14 Mar 2021 13:29:44,875 INFO : Inserting gi|2194089|pdb|1BEB|B
14 Mar 2021 13:29:44,923 INFO : 1% Done
14 Mar 2021 13:29:45,116 INFO : 2% Done
14 Mar 2021 13:29:45,192 INFO : 3% Done
14 Mar 2021 13:29:45,261 INFO : 4% Done
14 Mar 2021 13:29:45,413 INFO : 5% Done
14 Mar 2021 13:29:45,477 INFO : 6% Done
14 Mar 2021 13:29:45,519 INFO : 7% Done
14 Mar 2021 13:29:45,584 INFO : 8% Done
14 Mar 2021 13:29:45,732 INFO : 9% Done
14 Mar 2021 13:29:46,083 INFO : Inserting gi|129823|sp|P80025.1|PERL_BOVIN
14 Mar 2021 13:29:46,105 INFO : 10% Done
14 Mar 2021 13:29:46,182 INFO : 11% Done
14 Mar 2021 13:29:46,259 INFO : 12% Done
14 Mar 2021 13:29:46,347 INFO : 13% Done
14 Mar 2021 13:29:46,426 INFO : 14% Done
14 Mar 2021 13:29:46,545 INFO : 15% Done
14 Mar 2021 13:29:46,618 INFO : 16% Done
14 Mar 2021 13:29:46,760 INFO : 17% Done
14 Mar 2021 13:29:46,824 INFO : 18% Done
14 Mar 2021 13:29:46,929 INFO : 20% Done
14 Mar 2021 13:29:46,999 INFO : 21% Done
14 Mar 2021 13:29:47,039 INFO : 22% Done
14 Mar 2021 13:29:47,105 INFO : 24% Done
14 Mar 2021 13:29:47,158 INFO : 25% Done
14 Mar 2021 13:29:47,269 INFO : 26% Done
14 Mar 2021 13:29:47,311 INFO : 27% Done
14 Mar 2021 13:29:47,348 INFO : 28% Done
14 Mar 2021 13:29:47,393 INFO : 30% Done
14 Mar 2021 13:29:47,462 INFO : 31% Done
14 Mar 2021 13:29:47,550 INFO : Inserting gi|30466252|ref|NP_848667.1|
14 Mar 2021 13:29:47,593 INFO : 32% Done
14 Mar 2021 13:29:47,712 INFO : 33% Done
14 Mar 2021 13:29:47,779 INFO : 34% Done
14 Mar 2021 13:29:47,856 INFO : 35% Done
14 Mar 2021 13:29:47,928 INFO : 36% Done
14 Mar 2021 13:29:47,988 INFO : 37% Done
14 Mar 2021 13:29:48,099 INFO : 38% Done
14 Mar 2021 13:29:48,164 INFO : 39% Done
14 Mar 2021 13:29:48,249 INFO : 40% Done
14 Mar 2021 13:29:48,318 INFO : 41% Done
14 Mar 2021 13:29:48,437 INFO : Inserting gi|30794348|ref|NP_851372.1|
14 Mar 2021 13:29:48,448 INFO : 42% Done
14 Mar 2021 13:29:48,527 INFO : 43% Done
14 Mar 2021 13:29:48,605 INFO : 44% Done
14 Mar 2021 13:29:48,680 INFO : 45% Done
14 Mar 2021 13:29:48,812 INFO : Inserting gi|1351907|sp|P02769.4|ALBU_BOVIN
14 Mar 2021 13:29:48,823 INFO : 47% Done
14 Mar 2021 13:29:48,925 INFO : 48% Done
14 Mar 2021 13:29:48,968 INFO : 49% Done
14 Mar 2021 13:29:49,022 INFO : 51% Done
14 Mar 2021 13:29:49,180 INFO : 52% Done
14 Mar 2021 13:29:49,307 INFO : 53% Done
14 Mar 2021 13:29:49,412 INFO : 54% Done
14 Mar 2021 13:29:49,479 INFO : 55% Done
14 Mar 2021 13:29:49,556 INFO : 56% Done
14 Mar 2021 13:29:49,633 INFO : 57% Done
14 Mar 2021 13:29:49,746 INFO : 58% Done
14 Mar 2021 13:29:49,814 INFO : 59% Done
14 Mar 2021 13:29:49,892 INFO : 60% Done
14 Mar 2021 13:29:49,959 INFO : 61% Done
14 Mar 2021 13:29:50,010 INFO : 62% Done
14 Mar 2021 13:29:50,066 INFO : 63% Done
14 Mar 2021 13:29:50,135 INFO : 64% Done
14 Mar 2021 13:29:50,187 INFO : 66% Done
14 Mar 2021 13:29:50,285 INFO : 67% Done
14 Mar 2021 13:29:50,386 INFO : 68% Done
14 Mar 2021 13:29:50,458 INFO : 69% Done
14 Mar 2021 13:29:50,522 INFO : 71% Done
14 Mar 2021 13:29:50,640 INFO : 72% Done
14 Mar 2021 13:29:50,719 INFO : 73% Done
14 Mar 2021 13:29:50,774 INFO : 74% Done
14 Mar 2021 13:29:50,867 INFO : 76% Done
14 Mar 2021 13:29:50,958 INFO : 77% Done
14 Mar 2021 13:29:51,076 INFO : 78% Done
14 Mar 2021 13:29:51,128 INFO : 79% Done
14 Mar 2021 13:29:51,270 INFO : 80% Done
14 Mar 2021 13:29:51,329 INFO : 81% Done
14 Mar 2021 13:29:51,403 INFO : 82% Done
14 Mar 2021 13:29:51,554 INFO : 83% Done
14 Mar 2021 13:29:51,618 INFO : 84% Done
14 Mar 2021 13:29:51,671 INFO : 85% Done
14 Mar 2021 13:29:51,744 INFO : 86% Done
14 Mar 2021 13:29:51,839 INFO : 87% Done
14 Mar 2021 13:29:51,878 INFO : 88% Done
14 Mar 2021 13:29:51,970 INFO : 89% Done
14 Mar 2021 13:29:52,032 INFO : 90% Done
14 Mar 2021 13:29:52,081 INFO : 91% Done
14 Mar 2021 13:29:52,137 INFO : Inserting PRTC
14 Mar 2021 13:29:52,146 INFO : 92% Done
14 Mar 2021 13:29:52,291 INFO : 93% Done
14 Mar 2021 13:29:52,365 INFO : 94% Done
14 Mar 2021 13:29:52,418 INFO : 95% Done
14 Mar 2021 13:29:52,509 INFO : 96% Done
14 Mar 2021 13:29:52,549 INFO : 97% Done
14 Mar 2021 13:29:52,679 INFO : 98% Done
14 Mar 2021 13:29:52,736 INFO : Done parsing Skyline document.
14 Mar 2021 13:29:52,742 INFO : Creating and populating temp tables for Proportion values
14 Mar 2021 13:29:52,823 INFO : Setting PrecursorModifiedAreaProportion values on precursorchrominfo
14 Mar 2021 13:29:52,922 INFO : Setting ModifiedAreaProportion values on generalmoleculechrominfo
14 Mar 2021 13:29:52,986 INFO : Cleaning up temp tables
14 Mar 2021 13:29:53,006 INFO : Completed import of Skyline document from BSA_and_PRTC.sky.zip
14 Mar 2021 13:29:53,016 INFO : 100% Done
14 Mar 2021 13:29:53,457 INFO : Successfully completed task 'org.labkey.targetedms.pipeline.TargetedMSImportTask'