YEL037C: /Panorama Public/2018/MacCoss - Single-point Calibration

YEL037C

MacCoss - Single-point Calibration

Protein

File	dia_site-a_2018-10-05_13-29-22.sky.zip 1 GB SkyP file (link only, 1KB) Full Skyline file Copy relative URL to clipboard Copy full URL to clipboard
Description	RAD23 SGDID:S000000763, Chr V from 82603-81407, Genome Release 64-2-1, reverse complement, Verified ORF, "Protein with ubiquitin-like N terminus; subunit of Nuclear Excision Repair Factor 2 (NEF2) with Rad4p that binds damaged DNA; enhances protein deglycosylation activity of Png1p; also involved, with Rad4p, in ubiquitylated protein turnover"
Decoy	false
Note

Sequence Coverage

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By: Replicate: Modified forms: Combined Stacked

The number displayed on each peptide box is the rank
1										11										21										31										41										51										61										71										81										91
M	V	S	L	T	F	K	N	F	K	K	E	K	V	P	L	D	L	E	P	S	N	T	I	L	E	T	K	T	K	L	A	Q	S	I	S	C	E	E	S	Q	I	K	L	I	Y	S	G	K	V	L	Q	D	S	K	T	V	S	E	C	G	L	K	D	G	D	Q	V	V	F	M	V	S	Q	K	K	S	T	K	T	K	V	T	E	P	P	I	A	P	E	S	A	T	T	P	G	R	E	N	S
											12																			2																									1																								10
													7																																										1																										6
																																																															9

101										111										121										131										141										151										161										171										181										191
T	E	A	S	P	S	T	D	A	S	A	A	P	A	A	T	A	P	E	G	S	Q	P	Q	E	E	Q	T	A	T	T	E	R	T	E	S	A	S	T	P	G	F	V	V	G	T	E	R	N	E	T	I	E	R	I	M	E	M	G	Y	Q	R	E	E	V	E	R	A	L	R	A	A	F	N	N	P	D	R	A	V	E	Y	L	L	M	G	I	P	E	N	L	R	Q	P	E	P	Q	Q	Q	T
																																	1																					8																11								4



201										211										221										231										241										251										261										271										281										291
A	A	A	A	E	Q	P	S	T	A	A	T	T	A	E	Q	P	A	E	D	D	L	F	A	Q	A	A	Q	G	G	N	A	S	S	G	A	L	G	T	T	G	G	A	T	D	A	A	Q	G	G	P	P	G	S	I	G	L	T	V	E	D	L	L	S	L	R	Q	V	V	S	G	N	P	E	A	L	A	P	L	L	E	N	I	S	A	R	Y	P	Q	L	R	E	H	I	M	A	N	P	E	V
																																																																		5



301										311										321										331										341										351										361										371										381										391
F	V	S	M	L	L	E	A	V	G	D	N	M	Q	D	V	M	E	G	A	D	D	M	V	E	G	E	D	I	E	V	T	G	E	A	A	A	A	G	L	G	Q	G	E	G	E	G	S	F	Q	V	D	Y	T	P	E	D	D	Q	A	I	S	R	L	C	E	L	G	F	E	R	D	L	V	I	Q	V	Y	F	A	C	D	K	N	E	E	A	A	A	N	I	L	F	S	D	H	A	D
																																																															3								1												13

Intensity

(Log 10 base)

Annotations for RAD23_YEAST

Description	UV excision repair protein RAD23
Gene name	RAD23
Organisms	Saccharomyces cerevisiae Saccharomyces cerevisiae (strain ATCC 204508 / S288c)

Genbank IDs	GIs	Swiss-Prot Accessions	Swiss-Prot Names	Ensembl	IPI Numbers	GO Categories	Biological Processes
NP_010877.3	none loaded	D3DLL2 P32628	RAD23_YEAST	none loaded	none loaded	GO:0000111 GO:0000502 GO:0003684 GO:0005737 GO:0006289 GO:0006517 GO:0030433 GO:0043130	DNA damage DNA repair Ubl conjugation pathway

Peptides

Select All Select None Show Selected Show Unselected Show All	Peptide Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Bar Chart Pie Chart Quick Chart	Peptide Neutral Mass Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	Missed Cleavages Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	Avg. Measured RT Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	Predicted RT Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	RT Score Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart
	EKVPLDLEPSNTILETK	1925.0357	1	69.6559
	VPLDLEPSNTILETK	1667.8982	0	74.7639
	LAQSISCEESQIK	1491.7239	0	47.7112
	TVSECGLK	892.4324	0
	TVSECGLKDGDQVVFMVSQK	2226.0661	1
	DGDQVVFMVSQK	1351.6442	0	65.4717
	TKVTEPPIAPESATTPGR	1850.9738	1	48.6749
	VTEPPIAPESATTPGR	1621.8312	0	53.1025
	TESASTPGFVVGTER	1536.7420	0	55.2628
	IMEMGYQR	1026.4627	0	46.9178
	AAFNNPDR	903.4199	0	31.6452
	AVEYLLMGIPENLR	1616.8596	0	88.4616
	QVVSGNPEALAPLLENISAR	2077.1168	0	87.8243
	LCELGFER	1022.4855	0	56.3780
	DLVIQVYFACDK	1469.7225	0
	NEEAAANILFSDHAD	1615.7114	0	68.6304

Chromatograms

Display Chart Settings

Summary Charts

Peak Areas

Retention Times