YER178W: /Panorama Public/2018/MacCoss - Single-point Calibration

YER178W

MacCoss - Single-point Calibration

Protein

File	YeastOsmo_srm_targets-selevsek_EH_2018-06-21_16-31-07.sky.zip 4 MB SkyP file (link only, 1KB) Full Skyline file Copy relative URL to clipboard Copy full URL to clipboard
Description	PDA1 SGDID:S000000980, Chr V from 546817-548079, Genome Release 64-2-1, Verified ORF, "E1 alpha subunit of the pyruvate dehydrogenase (PDH) complex; catalyzes the direct oxidative decarboxylation of pyruvate to acetyl-CoA; phosphorylated; regulated by glucose; PDH complex is concentrated in spots within the mitochondrial matrix, often near the ERMES complex and near peroxisomes"
Decoy	false
Note

Sequence Coverage

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By: Replicate: Modified forms: Combined Stacked

The number displayed on each peptide box is the rank
1										11										21										31										41										51										61										71										81										91
M	L	A	A	S	F	K	R	Q	P	S	Q	L	V	R	G	L	G	A	V	L	R	T	P	T	R	I	G	H	V	R	T	M	A	T	L	K	T	T	D	K	K	A	P	E	D	I	E	G	S	D	T	V	Q	I	E	L	P	E	S	S	F	E	S	Y	M	L	E	P	P	D	L	S	Y	E	T	S	K	A	T	L	L	Q	M	Y	K	D	M	V	I	I	R	R	M	E	M	A	C	D	A


101										111										121										131										141										151										161										171										181										191
L	Y	K	A	K	K	I	R	G	F	C	H	L	S	V	G	Q	E	A	I	A	V	G	I	E	N	A	I	T	K	L	D	S	I	I	T	S	Y	R	C	H	G	F	T	F	M	R	G	A	S	V	K	A	V	L	A	E	L	M	G	R	R	A	G	V	S	Y	G	K	G	G	S	M	H	L	Y	A	P	G	F	Y	G	G	N	G	I	V	G	A	Q	V	P	L	G	A	G	L	A	F	A


201										211										221										231										241										251										261										271										281										291
H	Q	Y	K	N	E	D	A	C	S	F	T	L	Y	G	D	G	A	S	N	Q	G	Q	V	F	E	S	F	N	M	A	K	L	W	N	L	P	V	V	F	C	C	E	N	N	K	Y	G	M	G	T	A	A	S	R	S	S	A	M	T	E	Y	F	K	R	G	Q	Y	I	P	G	L	K	V	N	G	M	D	I	L	A	V	Y	Q	A	S	K	F	A	K	D	W	C	L	S	G	K	G	P	L


301										311										321										331										341										351										361										371										381										391
V	L	E	Y	E	T	Y	R	Y	G	G	H	S	M	S	D	P	G	T	T	Y	R	T	R	D	E	I	Q	H	M	R	S	K	N	D	P	I	A	G	L	K	M	H	L	I	D	L	G	I	A	T	E	A	E	V	K	A	Y	D	K	S	A	R	K	Y	V	D	E	Q	V	E	L	A	D	A	A	P	P	P	E	A	K	L	S	I	L	F	E	D	V	Y	V	K	G	T	E	T	P	T	L
																																	2

401										411
R	G	R	I	P	E	D	T	W	D	F	K	K	Q	G	F	A	S	R	D
			1

Intensity

(Log 10 base)

Annotations for ODPA_YEAST

Description	Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial
Gene name	PDA1
Organisms	Saccharomyces cerevisiae Saccharomyces cerevisiae (strain ATCC 204508 / S288c)

Genbank IDs	GIs	Swiss-Prot Accessions	Swiss-Prot Names	Ensembl	IPI Numbers	GO Categories	Biological Processes	Molecular Functions
NP_011105.4	none loaded	D3DM87 P16387	ODPA_YEAST	none loaded	none loaded	GO:0004739 GO:0005967 GO:0006086 GO:0006096 GO:0042645	Glycolysis	Oxidoreductase

Peptides

Select All Select None Show Selected Show Unselected Show All	Peptide Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Bar Chart Pie Chart Quick Chart	Peptide Neutral Mass Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	Missed Cleavages Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	Avg. Measured RT Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	Predicted RT Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	RT Score Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart
	NDPIAGLK	826.4549	0	25.6746	25.0200	34.155815
	IPEDTWDFK	1149.5342	0	28.9397	30.0100	65.349625

Chromatograms

Display Chart Settings

Summary Charts

Peak Areas

Retention Times