ATCG00680.1: /Panorama Public/2017/UTurkuPlantBio - PSB33

ATCG00680.1

UTurkuPlantBio - PSB33

Protein

File	psb33_vs_WT_thylakoid_proteins_ratios.sky.zip 13 MB SkyP file (link only, 1KB) Full Skyline file Copy relative URL to clipboard Copy full URL to clipboard
Description	\| Symbols: PSBB \| photosystem II reaction center protein B \| chrC:72371-73897 FORWARD LENGTH=508
Decoy	false
Accession	P56777
Note

Sequence Coverage

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By: Replicate: Modified forms: Combined Stacked

The number displayed on each peptide box is the rank
1										11										21										31										41										51										61										71										81										91
M	G	L	P	W	Y	R	V	H	T	V	V	L	N	D	P	G	R	L	L	A	V	H	I	M	H	T	A	L	V	A	G	W	A	G	S	M	A	L	Y	E	L	A	V	F	D	P	S	D	P	V	L	D	P	M	W	R	Q	G	M	F	V	I	P	F	M	T	R	L	G	I	T	N	S	W	G	G	W	N	I	T	G	G	T	I	T	N	P	G	L	W	S	Y	E	G	V	A	G	A	H




101										111										121										131										141										151										161										171										181										191
I	V	F	S	G	L	C	F	L	A	A	I	W	H	W	V	Y	W	D	L	E	I	F	C	D	E	R	T	G	K	P	S	L	D	L	P	K	I	F	G	I	H	L	F	L	S	G	V	A	C	F	G	F	G	A	F	H	V	T	G	L	Y	G	P	G	I	W	V	S	D	P	Y	G	L	T	G	K	V	Q	P	V	N	P	A	W	G	V	E	G	F	D	P	F	V	P	G	G	I	A	S




201										211										221										231										241										251										261										271										281										291
H	H	I	A	A	G	T	L	G	I	L	A	G	L	F	H	L	S	V	R	P	P	Q	R	L	Y	K	G	L	R	M	G	N	I	E	T	V	L	S	S	S	I	A	A	V	F	F	A	A	F	V	V	A	G	T	M	W	Y	G	S	A	T	T	P	I	E	L	F	G	P	T	R	Y	Q	W	D	Q	G	Y	F	Q	Q	E	I	Y	R	R	V	S	A	G	L	A	E	N	Q	S	L	S	E
																																																																																						5 >>
																																																																																							4 >>


301										311										321										331										341										351										361										371										381										391
A	W	A	K	I	P	E	K	L	A	F	Y	D	Y	I	G	N	N	P	A	K	G	G	L	F	R	A	G	S	M	D	N	G	D	G	I	A	V	G	W	L	G	H	P	V	F	R	N	K	E	G	R	E	L	F	V	R	R	M	P	T	F	F	E	T	F	P	V	V	L	V	D	G	D	G	I	V	R	A	D	V	P	F	R	R	A	E	S	K	Y	S	V	E	Q	V	G	V	T	V	E
>				6
>								2
								8

401										411										421										431										441										451										461										471										481										491
F	Y	G	G	E	L	N	G	V	S	Y	S	D	P	A	T	V	K	K	Y	A	R	R	A	Q	L	G	E	I	F	E	L	D	R	A	T	L	K	S	D	G	V	F	R	S	S	P	R	G	W	F	T	F	G	H	A	S	F	A	L	L	F	F	F	G	H	I	W	H	G	A	R	T	L	F	R	D	V	F	A	G	I	D	P	D	L	D	A	Q	V	E	F	G	A	F	Q	K	L	G	D
																						3
																						7
																							1

501
P	T	T	K	R	Q	A	V

Intensity

(Log 10 base)

Features

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Chain

Helix

Strand

Transmembrane region

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Annotations for PSBB_ARATH

Description	Photosystem II CP47 chlorophyll apoprotein
Gene name	psbB
Organism	Arabidopsis thaliana

Genbank IDs	GIs	Swiss-Prot Accessions	Swiss-Prot Names	Ensembl	IPI Numbers	GO Categories	Biological Processes
NP_051084.1	none loaded	P56777	PSBB_ARATH	none loaded	none loaded	GO:0009523 GO:0009535 GO:0009767 GO:0016021 GO:0016168 GO:0018298	Electron transport Photosynthesis Transport

Peptides

Select All Select None Show Paginated Show Selected Show Unselected	Peptide Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Bar Chart Pie Chart Quick Chart	Peptide Neutral Mass Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	Missed Cleavages Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	Avg. Measured RT Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	Predicted RT Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	RT Score Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart
	RVSAGLAENQSLSEAWAK	1915.9752	1	42.0716	42.0700	39.831936
	VSAGLAENQSLSEAWAK	1759.8741	0	45.6847	45.6600	49.906593
	IPEKLAFYDYIGNNPAK	1952.0044	1	51.0211	50.9500	64.78711
	LAFYDYIGNNPAK	1484.7300	0	51.0103	50.9400	64.756966
	LAFYDYIGNNPAKGGLFR	2015.0265	1	56.0928	55.9900	78.92888
	RAQLGEIFELDR	1445.7627	1	50.2618	50.2000	62.66973
	RAQLGEIFELDRATLK	1859.0265	2	51.1548	51.0900	65.15972
	AQLGEIFELDR	1289.6616	0	54.4486	54.3600	74.344215

Chromatograms

Display Chart Settings

Summary Charts

Peak Areas

Retention Times