21 Mar 2017 09:54:29,700 INFO : Copying experiment "Role of type 2 NAD(P)H dehydrogenase NdbC in redox regulation of carbon allocation in Synechocystis sp. PCC 68031" from folder /University of Turku - Plant Biology/ndbC_LC_SRM_ingel_exp to /Panorama Public/2017/Muth - Synechocystis sp. PCC 68031

21 Mar 2017 09:54:29,701 INFO : =======================================

21 Mar 2017 09:54:29,753 INFO : Starting to run task 'org.labkey.targetedms.pipeline.ExperimentExportTask' at location 'webserver'

21 Mar 2017 09:54:29,756 INFO : 

21 Mar 2017 09:54:29,756 INFO : Exporting experiment.

21 Mar 2017 09:54:31,060 INFO : 

21 Mar 2017 09:54:31,060 INFO : Experiment export completed successfully.

21 Mar 2017 09:54:31,060 INFO : Successfully completed task 'org.labkey.targetedms.pipeline.ExperimentExportTask'

21 Mar 2017 09:54:31,073 INFO : Starting to run task 'org.labkey.targetedms.pipeline.ExperimentImportTask' at location 'webserver'

21 Mar 2017 09:54:31,073 INFO : 

21 Mar 2017 09:54:31,073 INFO : Importing experiment.

21 Mar 2017 09:54:31,074 WARN : Import of groups outside of project context not supported.

21 Mar 2017 09:54:31,077 INFO : Loading folder properties (folder type, settings and active modules)

21 Mar 2017 09:54:31,103 INFO : Done importing folder properties (folder type, settings and active modules)

21 Mar 2017 09:54:31,106 INFO : Loading container specific module properties

21 Mar 2017 09:54:31,110 INFO : Done importing container specific module properties

21 Mar 2017 09:54:31,114 INFO : Loading wikis

21 Mar 2017 09:54:31,115 INFO : 0 wikis imported

21 Mar 2017 09:54:31,115 INFO : Done importing wikis

21 Mar 2017 09:54:31,117 INFO : Loading xar

21 Mar 2017 09:54:31,198 DEBUG: Finished loading Protocol with LSID 'urn:lsid:uw.edu:Protocol.Folder-2913:TargetedMS.ImportSkyZip'

21 Mar 2017 09:54:31,202 DEBUG: Finished loading Protocol with LSID 'urn:lsid:uw.edu:Protocol.Folder-2913:TargetedMS.ImportSkyZip.Core'

21 Mar 2017 09:54:31,219 DEBUG: Finished loading Protocol with LSID 'urn:lsid:uw.edu:Protocol.Folder-2913:TargetedMS.ImportSkyZip.Output'

21 Mar 2017 09:54:31,219 DEBUG: Protocol import complete

21 Mar 2017 09:54:31,232 DEBUG: Finished loading Experiment with LSID 'urn:lsid:uw.edu:Experiment.Folder-2913:Protein+quantification+in+Synechocystis+sp.+PCC+6803+mutant+lacking+type+2+NAD%28P%29H+dehydrogenase+ndbC.'

21 Mar 2017 09:54:31,232 DEBUG: Experiment/Run group import complete

21 Mar 2017 09:54:31,246 DEBUG: Protocol action set import complete

21 Mar 2017 09:54:31,273 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-2913:TargetedMS.ImportSkyZip'

21 Mar 2017 09:54:31,394 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:UploadedFile.Folder-2913:2f68f911-e9fd-1034-8f72-3013bb9bf08d'

21 Mar 2017 09:54:31,394 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-2913:TargetedMS.ImportSkyZip.Core'

21 Mar 2017 09:54:31,403 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-2913:TargetedMS.ImportSkyZip.Output'

21 Mar 2017 09:54:31,405 DEBUG: Finished loading ExperimentRun with LSID 'urn:lsid:uw.edu:Run.Folder-2913:2f68f98a-e9fd-1034-8f72-3013bb9bf08d'

21 Mar 2017 09:54:31,407 DEBUG: Trying to load data file file:/data/labkey/files/Panorama%20Public/2017/Muth%20-%20Synechocystis%20sp.%20PCC%2068031/@files/export/xar/experiments_and_runs.xar.exploded/Run14593/160819_SRM_ndbC_ALLtargets_final_results_MSstats_lightonly_corrected2_noNAs_2017-03-13_11-27-15.sky.zip into the system

21 Mar 2017 09:54:31,413 INFO : Starting import from 160819_SRM_ndbC_ALLtargets_final_results_MSstats_lightonly_corrected2_noNAs_2017-03-13_11-27-15.sky.zip

21 Mar 2017 09:54:31,443 INFO : Starting to import Skyline document from 160819_SRM_ndbC_ALLtargets_final_results_MSstats_lightonly_corrected2_noNAs_2017-03-13_11-27-15.sky.zip

21 Mar 2017 09:54:31,443 INFO : Expanding Cyano_iRT_db.irtdb

21 Mar 2017 09:54:31,444 INFO : Expanding ndbC_LC_ingel.blib

21 Mar 2017 09:54:31,451 INFO : Expanding NDH_2proj_exper1_all.blib

21 Mar 2017 09:54:31,454 INFO : Expanding Syn_HCD_IronDepr_2015.blib

21 Mar 2017 09:54:31,455 INFO : Expanding Syn_CID_IronDepr_2015.blib

21 Mar 2017 09:54:31,455 INFO : Expanding 160819_SRM_ndbC_ALLtargets_final_results_MSstats_lightonly_corrected2_noNAs.skyd

21 Mar 2017 09:54:31,565 INFO : Expanding 160819_SRM_ndbC_ALLtargets_final_results_MSstats_lightonly_corrected2_noNAs.sky.view

21 Mar 2017 09:54:31,566 INFO : Expanding 160819_SRM_ndbC_ALLtargets_final_results_MSstats_lightonly_corrected2_noNAs.sky

21 Mar 2017 09:54:31,615 WARN : The version of this Skyline document is 3.6. This is newer than the highest supported version 2.62

21 Mar 2017 09:54:32,343 INFO : Inserting sll0026

21 Mar 2017 09:54:32,466 INFO : Inserting sll0027

21 Mar 2017 09:54:32,624 INFO : Inserting sll0030

21 Mar 2017 09:54:32,750 INFO : Inserting sll0108

21 Mar 2017 09:54:32,860 INFO : Inserting sll0145

21 Mar 2017 09:54:32,968 INFO : Inserting sll0169

21 Mar 2017 09:54:33,180 INFO : Inserting sll0184

21 Mar 2017 09:54:33,360 INFO : Inserting sll0217

21 Mar 2017 09:54:33,469 INFO : Inserting sll0219

21 Mar 2017 09:54:33,601 INFO : Inserting sll0223

21 Mar 2017 09:54:33,724 INFO : Inserting sll0247

21 Mar 2017 09:54:33,807 INFO : Inserting sll0288

21 Mar 2017 09:54:33,987 INFO : Inserting sll0289

21 Mar 2017 09:54:34,247 INFO : Inserting sll0306

21 Mar 2017 09:54:34,377 INFO : Inserting sll0359

21 Mar 2017 09:54:34,594 INFO : Inserting sll0427

21 Mar 2017 09:54:34,808 INFO : Inserting sll0519

21 Mar 2017 09:54:35,017 INFO : Inserting sll0520

21 Mar 2017 09:54:35,219 INFO : Inserting sll0537

21 Mar 2017 09:54:35,347 INFO : Inserting sll0540

21 Mar 2017 09:54:35,607 INFO : Inserting sll0550

21 Mar 2017 09:54:35,965 INFO : Inserting sll0587

21 Mar 2017 09:54:36,135 INFO : Inserting sll0679

21 Mar 2017 09:54:36,339 INFO : Inserting sll0680

21 Mar 2017 09:54:36,604 INFO : Inserting sll0681

21 Mar 2017 09:54:36,807 INFO : Inserting sll0683

21 Mar 2017 09:54:37,013 INFO : Inserting sll0684

21 Mar 2017 09:54:37,340 INFO : Inserting sll0745

21 Mar 2017 09:54:37,568 INFO : Inserting sll0776

21 Mar 2017 09:54:37,833 INFO : Inserting sll0819

21 Mar 2017 09:54:38,122 INFO : Inserting sll0822

21 Mar 2017 09:54:38,410 INFO : Inserting sll0849

21 Mar 2017 09:54:38,684 INFO : Inserting sll0945

21 Mar 2017 09:54:38,915 INFO : Inserting sll1017

21 Mar 2017 09:54:39,079 INFO : Inserting sll1194

21 Mar 2017 09:54:39,306 INFO : Inserting sll1262

21 Mar 2017 09:54:39,560 INFO : Inserting sll1316

21 Mar 2017 09:54:39,710 INFO : Inserting sll1317

21 Mar 2017 09:54:39,930 INFO : Inserting sll1349

21 Mar 2017 09:54:40,209 INFO : Inserting sll1382

21 Mar 2017 09:54:40,349 INFO : Inserting sll1393

21 Mar 2017 09:54:40,539 INFO : Inserting sll1423

21 Mar 2017 09:54:40,754 INFO : Inserting sll1450

21 Mar 2017 09:54:40,961 INFO : Inserting sll1451

21 Mar 2017 09:54:41,031 INFO : Inserting sll1452

21 Mar 2017 09:54:41,162 INFO : Inserting sll1453

21 Mar 2017 09:54:41,290 INFO : Inserting sll1454

21 Mar 2017 09:54:41,411 INFO : Inserting sll1463

21 Mar 2017 09:54:41,604 INFO : Inserting sll1484

21 Mar 2017 09:54:41,824 INFO : Inserting sll1499

21 Mar 2017 09:54:42,073 INFO : Inserting sll1521

21 Mar 2017 09:54:42,385 INFO : Inserting sll1594

21 Mar 2017 09:54:42,590 INFO : Inserting sll1633

21 Mar 2017 09:54:42,797 INFO : Inserting sll1689

21 Mar 2017 09:54:42,914 INFO : Inserting sll1732

21 Mar 2017 09:54:43,130 INFO : Inserting sll1733

21 Mar 2017 09:54:43,343 INFO : Inserting sll1734

21 Mar 2017 09:54:43,528 INFO : Inserting sll1735

21 Mar 2017 09:54:43,732 INFO : Inserting sll1818

21 Mar 2017 09:54:43,940 INFO : Inserting sll1980

21 Mar 2017 09:54:44,127 INFO : Inserting slr0009

21 Mar 2017 09:54:44,339 INFO : Inserting slr0012

21 Mar 2017 09:54:44,526 INFO : Inserting slr0040

21 Mar 2017 09:54:44,725 INFO : Inserting slr0041

21 Mar 2017 09:54:44,886 INFO : Inserting slr0043

21 Mar 2017 09:54:45,029 INFO : Inserting slr0044

21 Mar 2017 09:54:45,168 INFO : Inserting slr0261

21 Mar 2017 09:54:45,377 INFO : Inserting slr0288

21 Mar 2017 09:54:45,505 INFO : Inserting slr0331

21 Mar 2017 09:54:45,647 INFO : Inserting slr0342

21 Mar 2017 09:54:45,775 INFO : Inserting slr0343

21 Mar 2017 09:54:45,891 INFO : Inserting slr0394

21 Mar 2017 09:54:46,036 INFO : Inserting slr0436

21 Mar 2017 09:54:46,246 INFO : Inserting slr0623

21 Mar 2017 09:54:46,436 INFO : Inserting slr0638

21 Mar 2017 09:54:46,578 INFO : Inserting slr0844

21 Mar 2017 09:54:46,770 INFO : Inserting slr0884

21 Mar 2017 09:54:46,925 INFO : Inserting slr0898

21 Mar 2017 09:54:47,119 INFO : Inserting slr1030

21 Mar 2017 09:54:47,311 INFO : Inserting slr1055

21 Mar 2017 09:54:47,421 INFO : Inserting slr1139

21 Mar 2017 09:54:47,551 INFO : Inserting slr1239

21 Mar 2017 09:54:47,729 INFO : Inserting slr1247

21 Mar 2017 09:54:47,921 INFO : Inserting slr1280

21 Mar 2017 09:54:48,114 INFO : Inserting slr1281

21 Mar 2017 09:54:48,304 INFO : Inserting slr1291

21 Mar 2017 09:54:48,434 INFO : Inserting slr1302

21 Mar 2017 09:54:48,618 INFO : Inserting slr1311

21 Mar 2017 09:54:48,828 INFO : Inserting slr1418

21 Mar 2017 09:54:49,019 INFO : Inserting slr1512

21 Mar 2017 09:54:49,229 INFO : Inserting slr1623

21 Mar 2017 09:54:49,420 INFO : Inserting slr1643

21 Mar 2017 09:54:49,536 INFO : Inserting slr1645

21 Mar 2017 09:54:49,768 INFO : Inserting slr1655

21 Mar 2017 09:54:49,982 INFO : Inserting slr1743

21 Mar 2017 09:54:50,174 INFO : Inserting slr1756

21 Mar 2017 09:54:50,436 INFO : Inserting slr1777

21 Mar 2017 09:54:50,612 INFO : Inserting slr1828

21 Mar 2017 09:54:50,738 INFO : Inserting slr1834

21 Mar 2017 09:54:50,954 INFO : Inserting slr1835

21 Mar 2017 09:54:51,135 INFO : Imported 100 peptide groups.

21 Mar 2017 09:54:51,161 INFO : Inserting slr1838

21 Mar 2017 09:54:51,358 INFO : Inserting slr2007

21 Mar 2017 09:54:51,563 INFO : Inserting ssl0020

21 Mar 2017 09:54:51,705 INFO : Inserting ssl0105

21 Mar 2017 09:54:51,906 INFO : Inserting ssl0352

21 Mar 2017 09:54:52,187 INFO : Inserting ssl0546

21 Mar 2017 09:54:52,375 INFO : Inserting ssl0707

21 Mar 2017 09:54:52,594 INFO : Inserting ssr2831

21 Mar 2017 09:54:52,737 INFO : Completed import of Skyline document from 160819_SRM_ndbC_ALLtargets_final_results_MSstats_lightonly_corrected2_noNAs_2017-03-13_11-27-15.sky.zip

21 Mar 2017 09:54:52,745 DEBUG: Finished trying to load data file file:/data/labkey/files/Panorama%20Public/2017/Muth%20-%20Synechocystis%20sp.%20PCC%2068031/@files/export/xar/experiments_and_runs.xar.exploded/Run14593/160819_SRM_ndbC_ALLtargets_final_results_MSstats_lightonly_corrected2_noNAs_2017-03-13_11-27-15.sky.zip into the system

21 Mar 2017 09:54:52,746 INFO : Done importing xar

21 Mar 2017 09:54:52,753 INFO : Loading pages and webpart properties

21 Mar 2017 09:54:52,803 INFO : Done importing pages and webpart properties

21 Mar 2017 09:54:52,804 INFO : 

21 Mar 2017 09:54:52,804 INFO : Experiment import completed successfully.

21 Mar 2017 09:54:52,804 INFO : Successfully completed task 'org.labkey.targetedms.pipeline.ExperimentImportTask'

21 Mar 2017 09:54:52,822 INFO : Starting to run task 'org.labkey.targetedms.pipeline.CopyExperimentFinalTask' at location 'webserver'

21 Mar 2017 09:54:52,823 INFO : 

21 Mar 2017 09:54:52,823 INFO : Finishing up experiment copy.

21 Mar 2017 09:54:52,826 INFO : Creating a new TargetedMS experiment entry in targetedms.ExperimentAnnotations.

21 Mar 2017 09:54:52,882 INFO : Updating access URL to point to the new copy of the data.

21 Mar 2017 09:54:52,929 INFO : Successfully completed task 'org.labkey.targetedms.pipeline.CopyExperimentFinalTask'