YGR086C: /Panorama Public/2016/PECAN - A Library Free Peptide Detection Tool for DIA Data/Manually curated peak boundaries library for hyperparameters determination

YGR086C

Manually curated peak boundaries library for hyperparameters determination

Protein

File	Yeast_WT_10mz_top5_204peptides_2016-09-21_16-11-00.sky.zip 263 MB SkyP file (link only, 1KB) Full Skyline file Copy relative URL to clipboard Copy full URL to clipboard
Description	PIL1 SGDID:S000003318, Chr VII from 650617-649598, Genome Release 64-1-1, reverse complement, Verified ORF, "Primary component of eisosomes, which are large immobile cell cortex structures associated with endocytosis; null mutants show activation of Pkc1p/Ypk1p stress resistance pathways; detected in phosphorylated state in mitochondria; member of the BAR domain family"
Decoy	false
Accession	P53252
Note

Sequence Coverage

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By: Replicate: Modified forms: Combined Stacked

The number displayed on each peptide box is the rank
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Intensity

(Log 10 base)

Features

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Chain

Compositionally biased region

Cross-link

Modified residue

Region of interest

Annotations for PIL1_YEAST

Description	Sphingolipid long chain base-responsive protein PIL1
Gene name	PIL1
Organisms	Saccharomyces cerevisiae Saccharomyces cerevisiae (strain ATCC 204508 / S288c)

Genbank IDs	GIs	Swiss-Prot Accessions	Swiss-Prot Names	Ensembl	IPI Numbers	GO Categories
NP_011600.3	none loaded	D6VUL8 P53252	PIL1_YEAST	none loaded	none loaded	GO:0005811 GO:0006469 GO:0006897 GO:0008104 GO:0008289 GO:0009408 GO:0032126 GO:0070941

Peptides

Select All Select None Show Selected Show Unselected Show All	Peptide Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Bar Chart Pie Chart Quick Chart	Peptide Neutral Mass Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	Missed Cleavages Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	Avg. Measured RT Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	Predicted RT Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	RT Score Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart
	SAAGAFGPELSR	1161.5778	0	34.0567
	DIEGSVQPSR	1086.5306	0	26.1168
	IEVLEQELVR	1226.6871	0	41.6960
	AAFNYQFDSIIEHSEK	1897.8846	0	44.6600

Chromatograms

Display Chart Settings

Summary Charts

Peak Areas

Retention Times