YOR122C: /Panorama Public/2016/PECAN - A Library Free Peptide Detection Tool for DIA Data/Manually curated peak boundaries library for hyperparameters determination

YOR122C

Manually curated peak boundaries library for hyperparameters determination

Protein

File	Yeast_WT_10mz_top5_204peptides_2016-09-21_16-11-00.sky.zip 263 MB SkyP file (link only, 1KB) Full Skyline file Copy relative URL to clipboard Copy full URL to clipboard
Description	PFY1 SGDID:S000005648, Chr XV from 552665-552298,552887-552875, Genome Release 64-1-1, reverse complement, Verified ORF, "Profilin, binds actin, phosphatidylinositol 4,5-bisphosphate, and polyproline regions; involved in cytoskeleton organization; required for normal timing of actin polymerization in response to thermal stress"
Decoy	false
Accession	P07274
Note

Sequence Coverage

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By: Replicate: Modified forms: Combined Stacked

The number displayed on each peptide box is the rank
1										11										21										31										41										51										61										71										81										91
M	S	W	Q	A	Y	T	D	N	L	I	G	T	G	K	V	D	K	A	V	I	Y	S	R	A	G	D	A	V	W	A	T	S	G	G	L	S	L	Q	P	N	E	I	G	E	I	V	Q	G	F	D	N	P	A	G	L	Q	S	N	G	L	H	I	Q	G	Q	K	F	M	L	L	R	A	D	D	R	S	I	Y	G	R	H	D	A	E	G	V	V	C	V	R	T	K	Q	T	V	I	I	A	H
																																																																																	1

101										111										121
Y	P	P	T	V	Q	A	G	E	A	T	K	I	V	E	Q	L	A	D	Y	L	I	G	V	Q	Y
												2

Intensity

(Log 10 base)

Features

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Chain

Helix

Strand

Annotations for PROF_YEAST

Description	Profilin
Gene name	PFY1
Organisms	Saccharomyces cerevisiae Saccharomyces cerevisiae (strain ATCC 204508 / S288c)

Genbank IDs	GIs	Swiss-Prot Accessions	Swiss-Prot Names	Ensembl	IPI Numbers	GO Categories
NP_014765.3	none loaded	D6W2I0 P07274	PROF_YEAST	none loaded	none loaded	GO:0003785 GO:0005546 GO:0005829 GO:0005856 GO:0019897 GO:0030036 GO:0042989 GO:0046907 GO:0070064 GO:0090338

Peptides

Select All Select None Show Selected Show Unselected Show All	Peptide Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Bar Chart Pie Chart Quick Chart	Peptide Neutral Mass Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	Missed Cleavages Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	Avg. Measured RT Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	Predicted RT Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	RT Score Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart
	HDAEGVVCVR	1140.5346	0	22.7965
	IVEQLADYLIGVQY	1622.8556	0	62.8652

Chromatograms

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Summary Charts

Peak Areas

Retention Times