YGR234W: /Panorama Public/2016/PECAN - A Library Free Peptide Detection Tool for DIA Data/Manually curated peak boundaries library for hyperparameters determination

YGR234W

Manually curated peak boundaries library for hyperparameters determination

Protein

File	Yeast_WT_10mz_top5_204peptides_2016-09-21_16-11-00.sky.zip 263 MB SkyP file (link only, 1KB) Full Skyline file Copy relative URL to clipboard Copy full URL to clipboard
Description	YHB1 SGDID:S000003466, Chr VII from 959904-961103, Genome Release 64-1-1, Verified ORF, "Nitric oxide oxidoreductase, flavohemoglobin involved in nitric oxide detoxification; plays a role in the oxidative and nitrosative stress responses"
Decoy	false
Accession	P39676
Note

Sequence Coverage

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By: Replicate: Modified forms: Combined Stacked

The number displayed on each peptide box is the rank
1										11										21										31										41										51										61										71										81										91
M	L	A	E	K	T	R	S	I	I	K	A	T	V	P	V	L	E	Q	Q	G	T	V	I	T	R	T	F	Y	K	N	M	L	T	E	H	T	E	L	L	N	I	F	N	R	T	N	Q	K	V	G	A	Q	P	N	A	L	A	T	T	V	L	A	A	A	K	N	I	D	D	L	S	V	L	M	D	H	V	K	Q	I	G	H	K	H	R	A	L	Q	I	K	P	E	H	Y	P	I	V	G	E
																														4

101										111										121										131										141										151										161										171										181										191
Y	L	L	K	A	I	K	E	V	L	G	D	A	A	T	P	E	I	I	N	A	W	G	E	A	Y	Q	A	I	A	D	I	F	I	T	V	E	K	K	M	Y	E	E	A	L	W	P	G	W	K	P	F	D	I	T	A	K	E	Y	V	A	S	D	I	V	E	F	T	V	K	P	K	F	G	S	G	I	E	L	E	S	L	P	I	T	P	G	Q	Y	I	T	V	N	T	H	P	I	R	Q	E
																																																									2																																									<

201										211										221										231										241										251										261										271										281										291
N	Q	Y	D	A	L	R	H	Y	S	L	C	S	A	S	T	K	N	G	L	R	F	A	V	K	M	E	A	A	R	E	N	F	P	A	G	L	V	S	E	Y	L	H	K	D	A	K	V	G	D	E	I	K	L	S	A	P	A	G	D	F	A	I	N	K	E	L	I	H	Q	N	E	V	P	L	V	L	L	S	S	G	V	G	V	T	P	L	L	A	M	L	E	E	Q	V	K	C	N	P	N
<< 3							6																																														1

301										311										321										331										341										351										361										371										381										391
R	P	I	Y	W	I	Q	S	S	Y	D	E	K	T	Q	A	F	K	K	H	V	D	E	L	L	A	E	C	A	N	V	D	K	I	I	V	H	T	D	T	E	P	L	I	N	A	A	F	L	K	E	K	S	P	A	H	A	D	V	Y	T	C	G	S	L	A	F	M	Q	A	M	I	G	H	L	K	E	L	E	H	R	D	D	M	I	H	Y	E	P	F	G	P	K	M	S	T	V	Q	V
																			5														7

Intensity

(Log 10 base)

Features

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Active site

Binding site

Chain

Domain

Modified residue

Region of interest

Sequence variant

Site

Annotations for FHP_YEAST

Description	Flavohemoprotein
Gene name	YHB1
Organisms	Saccharomyces cerevisiae Saccharomyces cerevisiae (strain ATCC 204508 / S288c)

Genbank IDs	GIs	Swiss-Prot Accessions	Swiss-Prot Names	Ensembl	IPI Numbers	GO Categories	Biological Processes	Molecular Functions
NP_011750.1	none loaded	D6VV14 P39676 Q6B1W6 Q9C1R6	FHP_YEAST	none loaded	none loaded	GO:0005506 GO:0005759 GO:0005829 GO:0008941 GO:0009636 GO:0015671 GO:0016966 GO:0019825 GO:0020037 GO:0034599	Detoxification	Oxidoreductase

Peptides

Select All Select None Show Selected Show Unselected Show All	Peptide Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Bar Chart Pie Chart Quick Chart	Peptide Neutral Mass Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	Missed Cleavages Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	Avg. Measured RT Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	Predicted RT Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	RT Score Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart
	NMLTEHTELLNIFNR	1843.9251	0	51.0541
	EYVASDIVEFTVKPK	1723.9033	0	42.7614
	QENQYDALR	1135.5258	0	26.8847
	HYSLCSASTK	1152.5234	0	20.8172
	LSAPAGDFAINK	1202.6295	0	35.9141
	HVDELLAECANVDK	1611.7563	0	33.3912
	IIVHTDTEPLINAAFLK	1894.0564	0	46.2121

Chromatograms

Display Chart Settings

Summary Charts

Peak Areas

Retention Times