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Phospho_isomer_response_ratios_4to1_1to4_2015-03-02_10-10-51.sky.zip

Schilling - MS1_MS2_SWATH

Document Summary

 
 
2 proteins, 2 peptides, 2 precursors, 3 transitions  -  6 replicates  -  Skyline-daily (64-bit) 3.0.9.7236

Peptide Map

 
11.01232.591232.591232.59sp|P63038|CH60_MOUSE406-417 
(K)VGGTSDVEVNEK(K)
 29,652,292
11.21365.601365.611365.60sp|Q9EQ20|MMSA_MOUSE77-88 
(K)AEMDAAVESCKR(A)
Carbamidomethyl Cysteine @ C869,965,095
11.41453.691453.701453.69sp|P54869|HMCS2_MOUSE343-354 
(K)LEETYTNKDVDK(A)
 20,834,810
11.61059.521059.521059.51sp|P47738|ALDH2_MOUSE386-396 
(K)LLCGGGAAADR(G)
Carbamidomethyl Cysteine @ C38871,699,048
12.21072.581072.581072.58sp|P08249|MDHM_MOUSE230-239 
(R)IQEAGTEVVK(A)
 28,487,972
12.31235.691235.691235.69sp|Q8C196|CPSM_MOUSE1158-1168 
(R)VSQEHPVVLTK(F)
 214,165,520
12.71408.671408.671408.67sp|P09103|PDIA1_MOUSE329-340 
(K)YKPESDELTAEK(I)
 8,941,374
12.81209.501209.511209.50sp|Q9EQ20|MMSA_MOUSE77-87 
(K)AEMDAAVESCK(R)
Carbamidomethyl Cysteine @ C865,666,854
13.61591.761591.771591.77sp|P38647|GRP75_MOUSE174-187 
(K)MKETAENYLGHTAK(N)
 3,438,530
13.61648.791648.801648.79sp|P24270|CATA_MOUSE431-444 
(K)RFNSANEDNVTQVR(T)
 6,543,331
13.81817.931817.941817.94sp|Q8VCW8|ACSF2_MOUSE532-547 
(K)HPQVQEAQVVGVKDER(M)
 4,624,496
14.01204.581204.581204.58sp|Q8K2B3|DHSA_MOUSE528-538 
(R)VGSVLQEGCEK(I)
Carbamidomethyl Cysteine @ C53612,607,378
14.3881.41881.41881.41sp|Q91VA0|ACSM1_MOUSE242-248 
(R)SYIPSCR(K)
Carbamidomethyl Cysteine @ C24712,025,076
14.6898.51898.51898.51sp|P56480|ATPB_MOUSE125-133 
(K)VLDSGAPIK(I)
 42,782,688
15.41292.591292.601292.59sp|P09103|PDIA1_MOUSE427-438 
(K)MDSTANEVEAVK(V)
 6,921,494
15.51065.501065.511065.51sp|P09103|PDIA1_MOUSE455-463 
(R)TVIDYNGER(T)
 6,442,430
15.51187.671187.681187.68sp|Q8BWT1|THIM_MOUSE361-370 
(R)ITAHLVHELR(R)
 4,617,479
15.91492.691492.701492.69sp|P24270|CATA_MOUSE432-444 
(R)FNSANEDNVTQVR(T)
 15,844,018
16.21107.561107.571107.57sp|Q8K2B3|DHSA_MOUSE251-261 
(K)NTVIATGGYGR(T)
 7,797,076
16.31194.581194.581194.58sp|Q9R0H0|ACOX1_MOUSE149-159 
(R)GLETTATYDPK(T)
 18,701,572
16.7901.49901.49901.49sp|P47738|ALDH2_MOUSE431-438 
(K)TIEEVVGR(A)
 87,908,648
16.71105.541105.551105.54sp|Q9EQ20|MMSA_MOUSE367-376 
(R)VCNLIDSGTK(E)
Carbamidomethyl Cysteine @ C36824,738,552
16.81217.631217.631217.63sp|P41216|ACSL1_MOUSE563-573 
(K)LAQGEYIAPEK(I)
 7,543,538
16.81337.631337.631337.63sp|P24270|CATA_MOUSE222-233 
(K)LVNADGEAVYCK(F)
Carbamidomethyl Cysteine @ C23239,041,804
17.01013.571013.571013.58sp|Q9CQR4|ACO13_MOUSE28-37 
(K)VTLVSAAPEK(L)
 9,564,227
17.8993.53993.53993.52sp|P54869|HMCS2_MOUSE84-92 
(K)YTVGLGQTR(M)
 103,216,480
17.81907.001907.011907.02sp|Q9R0H0|ACOX1_MOUSE256-272 
(K)YAQVKPDGTYVKPLSNK(L)
 15,545,544
18.01730.761730.761730.75sp|Q99KI0|ACON_MOUSE535-549 
(R)SDFDPGQDTYQHPPK(D)
 6,717,560
18.11547.781547.781547.78sp|Q8C196|CPSM_MOUSE893-906 
(K)GLNSDSVTEETLRK(A)
 89,382,872
18.21751.881751.881751.89sp|P54869|HMCS2_MOUSE340-354 
(R)GLKLEETYTNKDVDK(A)
 10,980,651
18.51165.541165.541165.54sp|Q91VA0|ACSM1_MOUSE464-474 
(R)GDDVINASGYR(I)
 17,830,032
18.71505.701505.711505.70sp|P47738|ALDH2_MOUSE358-370 
(R)TEQGPQVDETQFK(K)
 39,832,080
18.91161.591161.601161.59sp|Q8C196|CPSM_MOUSE1445-1453 
(K)FVHDNYVIR(R)
 32,558,708
19.21390.631390.631390.63sp|P24270|CATA_MOUSE481-492 
(K)NFTDVHPDYGAR(I)
 35,145,832
19.41567.761567.771567.76sp|P38647|GRP75_MOUSE108-121 
(R)QAVTNPNNTFYATK(R)
 7,521,452
19.61023.491023.491023.49sp|Q8QZT1|THIL_MOUSE179-187 
(K)DGLTDVYNK(I)
 21,820,582
20.01275.611275.621275.61sp|P24270|CATA_MOUSE253-263 
(R)LAQEDPDYGLR(D)
 16,799,574
20.21328.661328.671328.67sp|Q8K2B3|DHSA_MOUSE313-325 
(R)GEGGILINSQGER(F)
 12,623,196
20.31881.961881.971881.95sp|P24270|CATA_MOUSE20-38 
(R)ASQRPDVLTTGGGNPIGDK(L)
 39,359,712
20.5961.50961.50961.50sp|P24270|CATA_MOUSE39-47 
(K)LNIMTAGSR(G)
 24,886,340
20.61077.571077.581077.58sp|P41216|ACSL1_MOUSE378-387 
(R)IFGQANTSLK(R)
 9,549,692
20.61681.651681.671681.66pyruvate dehydrogenase 1alpha  
YHGHSMSDPGVSYR
 885,809
20.61681.661681.671681.66pyruvate dehydrogenase 1alpha  
YHGHSMSDPGVSYR
 663,103
20.61681.661681.661681.66pyruvate dehydrogenase 1alpha  
YHGHSMSDPGVSYR
 369,188
20.61681.661681.661681.66pyruvate dehydrogenase 1alpha  
YHGHSMSDPGVSYR
 763,589
20.61681.661681.661681.66pyruvate dehydrogenase 1alpha  
YHGHSMSDPGVSYR
 706,762
20.71681.641681.701681.66pyruvate dehydrogenase 1alpha  
YHGHSMSDPGVSYR
 1,167,873
20.71681.661681.671681.66pyruvate dehydrogenase 1alpha  
YHGHSMSDPGVSYR
 756,586
20.81681.641681.691681.66pyruvate dehydrogenase 1alpha  
YHGHSMSDPGVSYR
 1,237,078
20.81681.651681.681681.66pyruvate dehydrogenase 1alpha  
YHGHSMSDPGVSYR
 1,121,768
20.81681.651681.681681.66pyruvate dehydrogenase 1alpha  
YHGHSMSDPGVSYR
 1,268,611
20.9900.53900.53900.53sp|P63038|CH60_MOUSE397-405 
(K)LSDGVAVLK(V)
 54,426,468
20.91137.531137.531137.52sp|P05202|AATM_MOUSE171-180 
(R)DAGMQLQGYR(Y)
 13,364,833
21.3972.49972.49972.50sp|Q8QZT1|THIL_MOUSE363-370 
(K)MLEIDPQK(V)
 14,991,730
21.31402.611402.621402.61sp|Q8C196|CPSM_MOUSE815-826 
(R)MCHPSVDGFTPR(L)
Carbamidomethyl Cysteine @ C81619,852,652
21.31472.771472.781472.78sp|P38647|GRP75_MOUSE542-555 
(R)EQQIVIQSSGGLSK(D)
 2,881,240
21.31852.801852.811852.80sp|P38647|GRP75_MOUSE596-610 
(K)MEEFKDQLPADECNK(L)
Carbamidomethyl Cysteine @ C6089,058,684
21.4891.48891.48891.48sp|Q03265|ATPA_MOUSE435-441 
(K)LELAQYR(E)
 56,516,060
21.41043.581043.591043.59sp|P54869|HMCS2_MOUSE438-447 
(K)LVSSVSDLPK(R)
 182,736,176
21.5828.47828.47828.47sp|P47738|ALDH2_MOUSE110-116 
(R)LADLIER(D)
 89,990,400
21.62118.042118.052118.04sp|P50544|ACADV_MOUSE44-63 
(R)EATQAVLDKPETLSSDASTR(E)
 10,013,859
22.21419.681419.691419.68sp|Q8C196|CPSM_MOUSE893-905 
(K)GLNSDSVTEETLR(K)
 153,761,392
22.3979.51979.52979.52sp|P05202|AATM_MOUSE288-296 
(R)VGAFTVVCK(D)
Carbamidomethyl Cysteine @ C29524,031,296
22.3989.50989.50989.49sp|P47738|ALDH2_MOUSE349-357 
(R)VVGNPFDSR(T)
 117,123,312
22.41367.641367.641367.64sp|P08249|MDHM_MOUSE270-281 
(K)EGVVECSFVQSK(E)
Carbamidomethyl Cysteine @ C27527,494,064
22.41541.751541.751541.75sp|P24270|CATA_MOUSE417-430 
(R)SALEHSVQCAVDVK(R)
Carbamidomethyl Cysteine @ C42536,566,376
22.61073.551073.561073.55sp|Q9DBF1|AL7A1_MOUSE281-289 
(K)EVALMVQER(F)
 38,246,536
22.91214.651214.651214.65sp|P63038|CH60_MOUSE482-493 
(K)NAGVEGSLIVEK(I)
 47,516,420
23.51633.811633.811633.81sp|Q99K67|AASS_MOUSE334-348 
(K)SSVVPVEGCPELPHK(L)
Carbamidomethyl Cysteine @ C34212,515,083
23.72061.042061.052061.05sp|Q8VCW8|ACSF2_MOUSE272-290 
(K)GATLSHHNIVNNSMLIGQR(L)
 4,758,095
23.8803.49803.49803.49sp|Q8BWT1|THIM_MOUSE6-13 
(R)GVFIVAAK(R)
 139,392,656
23.8828.49828.49828.50sp|Q8QZT1|THIL_MOUSE172-178 
(K)LEDLIVK(D)
 30,953,788
23.8961.52961.52961.52sp|P24270|CATA_MOUSE469-476 
(K)DAQLFIQK(K)
 38,261,136
23.8  1197.51sp|P62737|ACTA_MOUSE53-63 
(K)DSYVGDEAQSK(R)
 1,932,508
23.8  1197.51sp|P68033|ACTC_MOUSE53-63 
(K)DSYVGDEAQSK(R)
 2,045,003
23.91806.931806.941806.93sp|Q8BWT1|THIM_MOUSE341-360 
(K)TNVSGGAIALGHPLGGSGSR(I)
 9,858,451
24.1919.51919.51919.51sp|P41216|ACSL1_MOUSE574-580 
(K)IENIYLR(S)
 15,530,399
24.1  855.48sp|P48962|ADT1_MOUSE24-31 
(K)TAVAPIER(V)
 14,547,256
24.1  855.48sp|P51881|ADT2_MOUSE24-31 
(K)TAVAPIER(V)
 14,582,511
24.1  855.48sp|Q3V132|ADT4_MOUSE37-44 
(K)TAVAPIER(V)
 14,592,965
24.21560.701560.711560.71sp|Q8QZT1|THIL_MOUSE206-218 
(R)QEQDTYALSSYTR(S)
 11,508,398
24.3  1059.51sp|P47738|ALDH2_MOUSE386-396 
(K)LLCGGGAAADR(G)
Carbamidomethyl Cysteine @ C38816,782,700
24.41867.901867.911867.91sp|Q99KI0|ACON_MOUSE69-84 
(K)IVYGHLDDPANQEIER(G)
 14,226,328
24.41929.001929.001929.00sp|Q8QZT1|THIL_MOUSE371-390 
(K)VNIHGGAVSLGHPIGMSGAR(I)
 21,186,412
24.51089.581089.591089.58sp|Q8C196|CPSM_MOUSE158-167 
(K)VPAIYGVDTR(M)
 113,138,376
24.61170.631170.631170.62sp|Q03265|ATPA_MOUSE150-161 
(R)VVDALGNAIDGK(G)
 134,007,120
24.61170.641170.651170.66sp|Q8QZT1|THIL_MOUSE64-75 
(K)LGTAAIQGAIEK(A)
 82,604,592
24.6  1227.61sp|Q99PG0|AAAD_MOUSE298-309 
(K)NPTPGSSELAQK(Y)
 1,515,672
24.7911.58911.58911.58sp|P63038|CH60_MOUSE293-301 
(K)VGLQVVAVK(A)
 57,686,608
24.71405.671405.681405.67sp|P56480|ATPB_MOUSE226-239 
(K)AHGGYSVFAGVGER(T)
 57,154,096
24.81013.571013.581013.58sp|P41216|ACSL1_MOUSE209-217 
(K)LLLEGVENK(L)
 21,565,064
24.91415.651415.661415.66sp|P50544|ACADV_MOUSE305-317 
(K)ASNTSEVYFDGVK(V)
 8,369,693
25.12270.112270.132270.12sp|P50544|ACADV_MOUSE615-633 
(R)IRENMASLQSSPQHQELFR(N)
 1,562,163
25.2933.52933.52933.53sp|P50544|ACADV_MOUSE280-287 
(K)ITAFVVER(S)
 19,832,360
25.51453.691453.701453.70sp|P08249|MDHM_MOUSE242-257 
(K)AGAGSATLSMAYAGAR(F)
 18,807,260
25.8991.53991.53991.53sp|P08249|MDHM_MOUSE177-185 
(R)ANTFVAELK(G)
 31,722,108
25.91003.471003.481003.47sp|P05202|AATM_MOUSE397-404 
(K)EFSVYMTK(D)
 17,287,160
26.31052.501052.501052.50sp|P54869|HMCS2_MOUSE359-367 
(K)ASLDMFNQK(T)
 50,742,916
26.4863.50863.51863.51sp|P50544|ACADV_MOUSE189-196 
(K)GILLYGTK(A)
 11,056,278
26.4999.57999.57999.57sp|Q03265|ATPA_MOUSE74-83 
(R)VLSIGDGIAR(V)
 159,006,336