Copying expriment: Multiplexed, scheduled high resolution (sMRM-HR) acquisition on a full scan QqTOF instrument with integrated data-dependent and targeted mass spectrometric workflows.: /Panorama Public/2015/Schilling

Copying expriment: Multiplexed, scheduled high resolution (sMRM-HR) acquisition on a full scan QqTOF instrument with integrated data-dependent and targeted mass spectrometric workflows.

Schilling - MRM_HR_TripleTOF_MS2_FullScanFiltering

Job Status

Created:

2015-07-17 15:58:58

Modified:

2020-04-20 16:55:16

Email:

vsharma@uw.edu

Status:

COMPLETE

Info:

Description:

Copying expriment: Multiplexed, scheduled high resolution (sMRM-HR) acquisition on a full scan QqTOF instrument with integrated data-dependent and targeted mass spectrometric workflows.

File Path:

/data/labkey/files/Panorama Public/2015/Schilling - MRM_HR_TripleTOF_MS2_FullScanFiltering/@files/Experiment_21.log

Files:

Experiment_21.log

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Log File

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17 Jul 2015 15:58:58,424 INFO : Copying experiment "Multiplexed, scheduled high resolution (sMRM-HR) acquisition on a full scan QqTOF instrument with integrated data-dependent and targeted mass spectrometric workflows." from folder /Schilling/MRM_HR_TripleTOF_MS2_FullScanFiltering to /Panorama Public/2015/Schilling - MRM_HR_TripleTOF_MS2_FullScanFiltering

17 Jul 2015 15:58:58,424 INFO : =======================================

17 Jul 2015 15:58:58,547 INFO : Starting to run task 'org.labkey.targetedms.pipeline.ExperimentExportTask' at location 'webserver'

17 Jul 2015 15:58:58,549 INFO :

17 Jul 2015 15:58:58,549 INFO : Exporting experiment.

17 Jul 2015 15:59:09,785 INFO :

17 Jul 2015 15:59:09,785 INFO : Experiment export completed successfully.

17 Jul 2015 15:59:09,785 INFO : Successfully completed task 'org.labkey.targetedms.pipeline.ExperimentExportTask'

17 Jul 2015 15:59:09,802 INFO : Starting to run task 'org.labkey.targetedms.pipeline.ExperimentImportTask' at location 'webserver'

17 Jul 2015 15:59:09,802 INFO :

17 Jul 2015 15:59:09,802 INFO : Importing experiment.

17 Jul 2015 15:59:09,816 WARN : Import of groups outside of project context not supported.

17 Jul 2015 15:59:09,821 INFO : Loading folder properties (folder type, settings and active modules)

17 Jul 2015 15:59:09,851 INFO : Done importing folder properties (folder type, settings and active modules)

17 Jul 2015 15:59:09,854 INFO : Done importing container specific module properties

17 Jul 2015 15:59:09,876 INFO : Loading wikis

17 Jul 2015 15:59:09,943 INFO : 1 wiki imported

17 Jul 2015 15:59:09,943 INFO : Done importing wikis

17 Jul 2015 15:59:09,951 INFO : Loading xar

17 Jul 2015 15:59:10,759 DEBUG: Finished loading Protocol with LSID 'urn:lsid:uw.edu:Protocol.Folder-1227:TargetedMS.ImportSkyZip'

17 Jul 2015 15:59:10,767 DEBUG: Finished loading Protocol with LSID 'urn:lsid:uw.edu:Protocol.Folder-1227:TargetedMS.ImportSkyZip.Core'

17 Jul 2015 15:59:10,775 DEBUG: Finished loading Protocol with LSID 'urn:lsid:uw.edu:Protocol.Folder-1227:TargetedMS.ImportSkyZip.Output'

17 Jul 2015 15:59:10,776 DEBUG: Protocol import complete

17 Jul 2015 15:59:10,823 DEBUG: Finished loading Experiment with LSID 'urn:lsid:uw.edu:Experiment.Folder-1227:Multiplexed%2C+scheduled+high+resolution+sMRM-HR+acquisition+on+full+scan+MS%2FMS+instruments+integrating+data+dependent+and+targeted%2C+quantitative+mass+spectrometric+workflows.'

17 Jul 2015 15:59:10,823 DEBUG: Experiment/Run group import complete

17 Jul 2015 15:59:10,851 DEBUG: Protocol action set import complete

17 Jul 2015 15:59:10,944 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-1227:TargetedMS.ImportSkyZip'

17 Jul 2015 15:59:11,032 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:UploadedFile.Folder-1227:08aa736a-0ecc-1033-8b16-3013bb9ba6a0'

17 Jul 2015 15:59:11,032 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-1227:TargetedMS.ImportSkyZip.Core'

17 Jul 2015 15:59:11,039 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-1227:TargetedMS.ImportSkyZip.Output'

17 Jul 2015 15:59:11,042 DEBUG: Finished loading ExperimentRun with LSID 'urn:lsid:uw.edu:Run.Folder-1227:08aa74e4-0ecc-1033-8b16-3013bb9ba6a0'

17 Jul 2015 15:59:11,069 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-1227:TargetedMS.ImportSkyZip'

17 Jul 2015 15:59:11,085 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:UploadedFile.Folder-1227:b0454fe2-0edb-1033-8b16-3013bb9ba6a0'

17 Jul 2015 15:59:11,085 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-1227:TargetedMS.ImportSkyZip.Core'

17 Jul 2015 15:59:11,090 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-1227:TargetedMS.ImportSkyZip.Output'

17 Jul 2015 15:59:11,092 DEBUG: Finished loading ExperimentRun with LSID 'urn:lsid:uw.edu:Run.Folder-1227:b0455384-0edb-1033-8b16-3013bb9ba6a0'

17 Jul 2015 15:59:11,110 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-1227:TargetedMS.ImportSkyZip'

17 Jul 2015 15:59:11,125 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:UploadedFile.Folder-1227:f06bc262-911b-1032-b843-3013bb9b1d5e'

17 Jul 2015 15:59:11,125 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-1227:TargetedMS.ImportSkyZip.Core'

17 Jul 2015 15:59:11,130 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-1227:TargetedMS.ImportSkyZip.Output'

17 Jul 2015 15:59:11,132 DEBUG: Finished loading ExperimentRun with LSID 'urn:lsid:uw.edu:Run.Folder-1227:f06bc270-911b-1032-b843-3013bb9b1d5e'

17 Jul 2015 15:59:11,150 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-1227:TargetedMS.ImportSkyZip'

17 Jul 2015 15:59:11,164 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:UploadedFile.Folder-1227:f06bc526-911b-1032-b843-3013bb9b1d5e'

17 Jul 2015 15:59:11,164 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-1227:TargetedMS.ImportSkyZip.Core'

17 Jul 2015 15:59:11,170 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-1227:TargetedMS.ImportSkyZip.Output'

17 Jul 2015 15:59:11,171 DEBUG: Finished loading ExperimentRun with LSID 'urn:lsid:uw.edu:Run.Folder-1227:f06bc54b-911b-1032-b843-3013bb9b1d5e'

17 Jul 2015 15:59:11,173 DEBUG: Trying to load data file file:/data/labkey/files/Panorama%20Public/2015/Schilling%20-%20MRM_HR_TripleTOF_MS2_FullScanFiltering/@files/export/xar/experiments_and_runs.xar.exploded/Run2196/Ecoli_5600_lysate_MRMHR_8_mProphet_v6_final_0717_2015_v4_for%20Panorama_2015-07-17_10-54-25.sky.zip into the system

17 Jul 2015 15:59:11,176 INFO : Starting import from Ecoli_5600_lysate_MRMHR_8_mProphet_v6_final_0717_2015_v4_for Panorama_2015-07-17_10-54-25.sky.zip

17 Jul 2015 15:59:11,188 INFO : Starting to import Skyline document from Ecoli_5600_lysate_MRMHR_8_mProphet_v6_final_0717_2015_v4_for Panorama_2015-07-17_10-54-25.sky.zip

17 Jul 2015 15:59:11,188 INFO : Expanding 5600_newLibrary.blib

17 Jul 2015 15:59:11,192 INFO : Expanding 5600_newLibrary.redundant.blib

17 Jul 2015 15:59:11,202 INFO : Expanding Ecoli_5600_lysate_MRMHR_8_mProphet_v6_final_0717_2015_v4_for Panorama.skyd

17 Jul 2015 15:59:11,578 INFO : Expanding Ecoli_5600_lysate_MRMHR_8_mProphet_v6_final_0717_2015_v4_for Panorama.sky.view

17 Jul 2015 15:59:11,578 INFO : Expanding Ecoli_5600_lysate_MRMHR_8_mProphet_v6_final_0717_2015_v4_for Panorama.sky

17 Jul 2015 15:59:11,610 WARN : The version of this Skyline document is 3.11. This is newer than the highest supported version 2.62

17 Jul 2015 15:59:12,009 INFO : Inserting sp|P39180|AG43_ECOLI

17 Jul 2015 15:59:17,310 INFO : Inserting sp|P0A6A5|ACKA_ECO57

17 Jul 2015 15:59:18,579 INFO : Inserting sp|A7ZTV5|ASNA_ECO24

17 Jul 2015 15:59:19,273 INFO : Inserting sp|A7ZQ24|GRCA_ECO24

17 Jul 2015 15:59:21,773 INFO : Inserting sp|P08200|IDH_ECOLI

17 Jul 2015 15:59:24,554 INFO : Inserting sp|P0AFG9|ODP1_ECO57

17 Jul 2015 15:59:30,357 INFO : Inserting sp|P06959|ODP2_ECOLI

17 Jul 2015 15:59:32,603 INFO : Inserting sp|P0AFH9|OSMY_ECOL6

17 Jul 2015 15:59:34,535 INFO : Inserting sp|P0ADU6|YGIW_ECO57

17 Jul 2015 15:59:35,443 INFO : Completed import of Skyline document from Ecoli_5600_lysate_MRMHR_8_mProphet_v6_final_0717_2015_v4_for Panorama_2015-07-17_10-54-25.sky.zip

17 Jul 2015 15:59:35,451 DEBUG: Finished trying to load data file file:/data/labkey/files/Panorama%20Public/2015/Schilling%20-%20MRM_HR_TripleTOF_MS2_FullScanFiltering/@files/export/xar/experiments_and_runs.xar.exploded/Run2196/Ecoli_5600_lysate_MRMHR_8_mProphet_v6_final_0717_2015_v4_for%20Panorama_2015-07-17_10-54-25.sky.zip into the system

17 Jul 2015 15:59:35,452 DEBUG: Trying to load data file file:/data/labkey/files/Panorama%20Public/2015/Schilling%20-%20MRM_HR_TripleTOF_MS2_FullScanFiltering/@files/export/xar/experiments_and_runs.xar.exploded/Run2197/MRM_HR_v3_yeast_new%20mProphet_0712_2015_v1_final_for%20Panorama_2015-07-17_11-11-41.sky.zip into the system

17 Jul 2015 15:59:35,455 INFO : Starting import from MRM_HR_v3_yeast_new mProphet_0712_2015_v1_final_for Panorama_2015-07-17_11-11-41.sky.zip

17 Jul 2015 15:59:35,463 INFO : Starting to import Skyline document from MRM_HR_v3_yeast_new mProphet_0712_2015_v1_final_for Panorama_2015-07-17_11-11-41.sky.zip

17 Jul 2015 15:59:35,463 INFO : Expanding yeast_200.blib

17 Jul 2015 15:59:35,484 INFO : Expanding yeast_200.redundant.blib

17 Jul 2015 15:59:35,511 INFO : Expanding MRM_HR_v3_yeast_new mProphet_0712_2015_v1_final_for Panorama.skyd

17 Jul 2015 15:59:35,872 INFO : Expanding MRM_HR_v3_yeast_new mProphet_0712_2015_v1_final_for Panorama.sky.view

17 Jul 2015 15:59:35,873 INFO : Expanding MRM_HR_v3_yeast_new mProphet_0712_2015_v1_final_for Panorama.sky

17 Jul 2015 15:59:35,942 WARN : The version of this Skyline document is 3.11. This is newer than the highest supported version 2.62

17 Jul 2015 15:59:36,218 INFO : Inserting sp|P38720|6PGD1_YEAST

17 Jul 2015 15:59:37,105 INFO : Inserting sp|P53319|6PGD2_YEAST

17 Jul 2015 15:59:37,208 INFO : Inserting sp|P31787|ACBP_YEAST

17 Jul 2015 15:59:37,384 INFO : Inserting sp|P19414|ACON_YEAST

17 Jul 2015 15:59:38,246 INFO : Inserting sp|P60010|ACT_YEAST

17 Jul 2015 15:59:38,759 INFO : Inserting sp|P00330|ADH1_YEAST

17 Jul 2015 15:59:39,932 INFO : Inserting sp|Q04894|ADH6_YEAST

17 Jul 2015 15:59:40,210 INFO : Inserting sp|P47143|ADK_YEAST

17 Jul 2015 15:59:40,393 INFO : Inserting sp|P38013|AHP1_YEAST

17 Jul 2015 15:59:40,983 INFO : Inserting sp|A6ZR27|ALDH5_YEAS7

17 Jul 2015 15:59:41,071 INFO : Inserting sp|P54115|ALDH6_YEAST

17 Jul 2015 15:59:41,491 INFO : Inserting sp|P14540|ALF_YEAST

17 Jul 2015 15:59:42,149 INFO : Inserting sp|P16550|APA1_YEAST

17 Jul 2015 15:59:42,281 INFO : Inserting sp|P40024|ARB1_YEAST

17 Jul 2015 15:59:42,605 INFO : Inserting sp|P11076|ARF1_YEAST

17 Jul 2015 15:59:42,962 INFO : Inserting sp|P19146|ARF2_YEAST

17 Jul 2015 15:59:43,027 INFO : Inserting sp|P53090|ARO8_YEAST

17 Jul 2015 15:59:43,155 INFO : Inserting sp|P32449|AROG_YEAST

17 Jul 2015 15:59:43,336 INFO : Inserting sp|P49089|ASNS1_YEAST

17 Jul 2015 15:59:43,808 INFO : Inserting sp|P49090|ASNS2_YEAST

17 Jul 2015 15:59:44,129 INFO : Inserting sp|P22768|ASSY_YEAST

17 Jul 2015 15:59:44,813 INFO : Inserting sp|P07251|ATPA_YEAST

17 Jul 2015 15:59:44,973 INFO : Inserting sp|P00830|ATPB_YEAST

17 Jul 2015 15:59:45,195 INFO : Inserting sp|P38891|BCA1_YEAST

17 Jul 2015 15:59:45,882 INFO : Inserting sp|P47176|BCA2_YEAST

17 Jul 2015 15:59:45,949 INFO : Inserting sp|P38934|BFR1_YEAST

17 Jul 2015 15:59:46,208 INFO : Inserting sp|P29311|BMH1_YEAST

17 Jul 2015 15:59:46,850 INFO : Inserting sp|P34730|BMH2_YEAST

17 Jul 2015 15:59:47,020 INFO : Inserting sp|P07245|C1TC_YEAST

17 Jul 2015 15:59:47,124 INFO : Inserting sp|P03965|CARB_YEAST

17 Jul 2015 15:59:47,369 INFO : Inserting sp|P07267|CARP_YEAST

17 Jul 2015 15:59:47,611 INFO : Inserting sp|P33322|CBF5_YEAST

17 Jul 2015 15:59:47,873 INFO : Inserting sp|P32582|CBS_YEAST

17 Jul 2015 15:59:48,506 INFO : Inserting sp|P25694|CDC48_YEAST

17 Jul 2015 15:59:48,638 INFO : Inserting sp|P14832|CYPH_YEAST

17 Jul 2015 15:59:48,991 INFO : Inserting sp|P31373|CYS3_YEAST

17 Jul 2015 15:59:49,211 INFO : Inserting sp|A6ZRX0|DBP2_YEAS7

17 Jul 2015 15:59:49,403 INFO : Inserting sp|P24783|DBP2_YEAST

17 Jul 2015 15:59:49,442 INFO : Inserting sp|A6ZP47|DED1_YEAS7

17 Jul 2015 15:59:49,747 INFO : Inserting sp|P06634|DED1_YEAST

17 Jul 2015 15:59:49,895 INFO : Inserting sp|P13663|DHAS_YEAST

17 Jul 2015 15:59:50,531 INFO : Inserting sp|P07262|DHE4_YEAST

17 Jul 2015 15:59:51,001 INFO : Inserting sp|P31116|DHOM_YEAST

17 Jul 2015 15:59:51,219 INFO : Inserting sp|P38791|DHYS_YEAST

17 Jul 2015 15:59:51,462 INFO : Inserting sp|P39976|DLD3_YEAST

17 Jul 2015 15:59:51,696 INFO : Inserting sp|P43616|DUG1_YEAST

17 Jul 2015 15:59:51,855 INFO : Inserting sp|P02994|EF1A_YEAST

17 Jul 2015 15:59:53,128 INFO : Inserting sp|P32471|EF1B_YEAST

17 Jul 2015 15:59:53,701 INFO : Inserting sp|P29547|EF1G1_YEAST

17 Jul 2015 15:59:53,807 INFO : Inserting sp|P36008|EF1G2_YEAST

17 Jul 2015 15:59:54,219 INFO : Inserting sp|P32324|EF2_YEAST

17 Jul 2015 15:59:56,542 INFO : Inserting sp|P16521|EF3A_YEAST

17 Jul 2015 15:59:58,824 INFO : Inserting sp|A6ZPJ1|EIF3B_YEAS7

17 Jul 2015 15:59:58,968 INFO : Inserting sp|Q05775|EIF3J_YEAST

17 Jul 2015 15:59:59,119 INFO : Inserting sp|P00924|ENO1_YEAST

17 Jul 2015 16:00:00,085 INFO : Inserting sp|P00925|ENO2_YEAST

17 Jul 2015 16:00:01,067 INFO : Inserting sp|P25087|ERG6_YEAST

17 Jul 2015 16:00:01,299 INFO : Inserting sp|P07149|FAS1_YEAST

17 Jul 2015 16:00:01,693 INFO : Inserting sp|P19097|FAS2_YEAST

17 Jul 2015 16:00:01,908 INFO : Inserting sp|P39676|FHP_YEAST

17 Jul 2015 16:00:02,067 INFO : Inserting sp|P20081|FKBP_YEAST

17 Jul 2015 16:00:02,374 INFO : Inserting sp|P00360|G3P1_YEAST

17 Jul 2015 16:00:03,350 INFO : Inserting sp|P00358|G3P2_YEAST

17 Jul 2015 16:00:04,102 INFO : Inserting sp|P00359|G3P3_YEAST

17 Jul 2015 16:00:05,442 INFO : Inserting sp|P12709|G6PI_YEAST

17 Jul 2015 16:00:06,693 INFO : Inserting sp|P38011|GBLP_YEAST

17 Jul 2015 16:00:07,558 INFO : Inserting sp|P53849|GIS2_YEAST

17 Jul 2015 16:00:08,317 INFO : Inserting sp|P32288|GLNA_YEAST

17 Jul 2015 16:00:08,675 INFO : Inserting sp|P37303|GLY1_YEAST

17 Jul 2015 16:00:08,858 INFO : Inserting sp|P37291|GLYC_YEAST

17 Jul 2015 16:00:09,318 INFO : Inserting sp|Q00055|GPD1_YEAST

17 Jul 2015 16:00:09,700 INFO : Inserting sp|P41277|GPP1_YEAST

17 Jul 2015 16:00:10,193 INFO : Inserting sp|P40106|GPP2_YEAST

17 Jul 2015 16:00:10,351 INFO : Inserting sp|P16474|GRP78_YEAST

17 Jul 2015 16:00:10,479 INFO : Inserting sp|P32835|GSP1_YEAST

17 Jul 2015 16:00:10,585 INFO : Inserting sp|P38625|GUAA_YEAST

17 Jul 2015 16:00:10,705 INFO : Inserting sp|P02293|H2B1_YEAST

17 Jul 2015 16:00:10,850 INFO : Inserting sp|P02309|H4_YEAST

17 Jul 2015 16:00:10,959 INFO : Inserting sp|P00815|HIS2_YEAST

17 Jul 2015 16:00:11,084 INFO : Inserting sp|P48570|HOSC_YEAST

17 Jul 2015 16:00:11,231 INFO : Inserting sp|P31539|HS104_YEAST

17 Jul 2015 16:00:11,377 INFO : Inserting sp|P15108|HSC82_YEAST

17 Jul 2015 16:00:13,056 INFO : Inserting sp|P19882|HSP60_YEAST

17 Jul 2015 16:00:13,805 INFO : Inserting sp|P10591|HSP71_YEAST

17 Jul 2015 16:00:15,337 INFO : Inserting sp|P10592|HSP72_YEAST

17 Jul 2015 16:00:16,124 INFO : Inserting sp|P11484|HSP75_YEAST

17 Jul 2015 16:00:17,787 INFO : Inserting sp|P40150|HSP76_YEAST

17 Jul 2015 16:00:17,902 INFO : Inserting sp|P12398|HSP77_YEAST

17 Jul 2015 16:00:18,754 INFO : Inserting sp|P32589|HSP7F_YEAST

17 Jul 2015 16:00:19,171 INFO : Inserting sp|P02829|HSP82_YEAST

17 Jul 2015 16:00:19,286 INFO : Inserting sp|P04807|HXKB_YEAST

17 Jul 2015 16:00:19,960 INFO : Inserting sp|P28834|IDH1_YEAST

17 Jul 2015 16:00:20,095 INFO : Inserting sp|P28241|IDH2_YEAST

17 Jul 2015 16:00:20,339 INFO : Inserting sp|P21954|IDHP_YEAST

17 Jul 2015 16:00:20,685 INFO : Inserting sp|P20459|IF2A_YEAST

17 Jul 2015 16:00:20,834 INFO : Inserting sp|P09064|IF2B_YEAST

17 Jul 2015 16:00:20,958 INFO : Inserting sp|P39730|IF2P_YEAST

17 Jul 2015 16:00:21,104 INFO : Inserting sp|A6ZQJ1|IF4A_YEAS7

17 Jul 2015 16:00:21,617 INFO : Inserting sp|P23301|IF5A1_YEAST

17 Jul 2015 16:00:21,784 INFO : Inserting sp|P38431|IF5_YEAST

17 Jul 2015 16:00:21,893 INFO : Imported 100 peptide groups.

17 Jul 2015 16:00:21,945 INFO : Inserting sp|P06168|ILV5_YEAST

17 Jul 2015 16:00:22,322 INFO : Inserting sp|Q02821|IMA1_YEAST

17 Jul 2015 16:00:22,430 INFO : Inserting sp|P40069|IMB4_YEAST

17 Jul 2015 16:00:22,548 INFO : Inserting sp|P39567|IMDH1_YEAST

17 Jul 2015 16:00:22,695 INFO : Inserting sp|P50095|IMDH3_YEAST

17 Jul 2015 16:00:22,813 INFO : Inserting sp|P00817|IPYR_YEAST

17 Jul 2015 16:00:23,287 INFO : Inserting sp|P16861|K6PF1_YEAST

17 Jul 2015 16:00:23,664 INFO : Inserting sp|P16862|K6PF2_YEAST

17 Jul 2015 16:00:23,988 INFO : Inserting sp|B3LG61|KAD1_YEAS1

17 Jul 2015 16:00:24,176 INFO : Inserting sp|P15454|KGUA_YEAST

17 Jul 2015 16:00:24,396 INFO : Inserting sp|P00549|KPYK1_YEAST

17 Jul 2015 16:00:25,481 INFO : Inserting sp|P07264|LEUC_YEAST

17 Jul 2015 16:00:25,975 INFO : Inserting sp|P05694|METE_YEAST

17 Jul 2015 16:00:26,980 INFO : Inserting sp|P10659|METK1_YEAST

17 Jul 2015 16:00:27,151 INFO : Inserting sp|P19358|METK2_YEAST

17 Jul 2015 16:00:27,335 INFO : Inserting sp|P53141|MLC1_YEAST

17 Jul 2015 16:00:27,429 INFO : Inserting sp|P40185|MMF1_YEAST

17 Jul 2015 16:00:27,716 INFO : Inserting sp|P41940|MPG1_YEAST

17 Jul 2015 16:00:28,229 INFO : Inserting sp|P33331|NTF2_YEAST

17 Jul 2015 16:00:28,365 INFO : Inserting sp|P38219|OLA1_YEAST

17 Jul 2015 16:00:28,565 INFO : Inserting sp|Q03558|OYE2_YEAST

17 Jul 2015 16:00:28,952 INFO : Inserting sp|Q12447|PAA1_YEAST

17 Jul 2015 16:00:29,100 INFO : Inserting sp|P38787|PANE_YEAST

17 Jul 2015 16:00:29,217 INFO : Inserting sp|P06169|PDC1_YEAST

17 Jul 2015 16:00:30,692 INFO : Inserting sp|P17967|PDI_YEAST

17 Jul 2015 16:00:30,993 INFO : Inserting sp|Q04182|PDR15_YEAST

17 Jul 2015 16:00:31,131 INFO : Inserting sp|P00560|PGK_YEAST

17 Jul 2015 16:00:31,218 INFO : Completed import of Skyline document from MRM_HR_v3_yeast_new mProphet_0712_2015_v1_final_for Panorama_2015-07-17_11-11-41.sky.zip

17 Jul 2015 16:00:31,225 DEBUG: Finished trying to load data file file:/data/labkey/files/Panorama%20Public/2015/Schilling%20-%20MRM_HR_TripleTOF_MS2_FullScanFiltering/@files/export/xar/experiments_and_runs.xar.exploded/Run2197/MRM_HR_v3_yeast_new%20mProphet_0712_2015_v1_final_for%20Panorama_2015-07-17_11-11-41.sky.zip into the system

17 Jul 2015 16:00:31,225 DEBUG: Trying to load data file file:/data/labkey/files/Panorama%20Public/2015/Schilling%20-%20MRM_HR_TripleTOF_MS2_FullScanFiltering/@files/export/xar/experiments_and_runs.xar.exploded/Run1124/Study9S_ABI_MichromMix_MS2_52B_v7_final_2015-02-07_10-25-07.sky.zip into the system

17 Jul 2015 16:00:31,228 INFO : Starting import from Study9S_ABI_MichromMix_MS2_52B_v7_final_2015-02-07_10-25-07.sky.zip

17 Jul 2015 16:00:31,234 INFO : Starting to import Skyline document from Study9S_ABI_MichromMix_MS2_52B_v7_final_2015-02-07_10-25-07.sky.zip

17 Jul 2015 16:00:31,235 INFO : Expanding Study9S_ABI_MichromMix_MS2_52B_v7_final.skyd

17 Jul 2015 16:00:31,294 INFO : Expanding Study9S_ABI_MichromMix_MS2_52B_v7_final.sky.view

17 Jul 2015 16:00:31,294 INFO : Expanding Study9S_ABI_MichromMix_MS2_52B_v7_final.sky

17 Jul 2015 16:00:31,386 INFO : Inserting 2194089|Beta

17 Jul 2015 16:00:31,622 INFO : Inserting 129823|Lactoperoxidase

17 Jul 2015 16:00:32,038 INFO : Inserting 00716246|Carbonic

17 Jul 2015 16:00:32,161 INFO : Inserting 188533Glutamate

17 Jul 2015 16:00:32,319 INFO : Inserting 118533|Glutamate

17 Jul 2015 16:00:32,792 INFO : Inserting 00706094|Alpha

17 Jul 2015 16:00:32,994 INFO : Inserting 1351907|Serum

17 Jul 2015 16:00:33,078 INFO : Completed import of Skyline document from Study9S_ABI_MichromMix_MS2_52B_v7_final_2015-02-07_10-25-07.sky.zip

17 Jul 2015 16:00:33,083 DEBUG: Finished trying to load data file file:/data/labkey/files/Panorama%20Public/2015/Schilling%20-%20MRM_HR_TripleTOF_MS2_FullScanFiltering/@files/export/xar/experiments_and_runs.xar.exploded/Run1124/Study9S_ABI_MichromMix_MS2_52B_v7_final_2015-02-07_10-25-07.sky.zip into the system

17 Jul 2015 16:00:33,083 DEBUG: Trying to load data file file:/data/labkey/files/Panorama%20Public/2015/Schilling%20-%20MRM_HR_TripleTOF_MS2_FullScanFiltering/@files/export/xar/experiments_and_runs.xar.exploded/Run1125/AB_Method_B_240transitions_5600_0514_2011_v6_final_complex1_2015-02-07_10-45-16.sky.zip into the system

17 Jul 2015 16:00:33,086 INFO : Starting import from AB_Method_B_240transitions_5600_0514_2011_v6_final_complex1_2015-02-07_10-45-16.sky.zip

17 Jul 2015 16:00:33,090 INFO : Starting to import Skyline document from AB_Method_B_240transitions_5600_0514_2011_v6_final_complex1_2015-02-07_10-45-16.sky.zip

17 Jul 2015 16:00:33,091 INFO : Expanding AB_Method_B_240transitions_5600_0514_2011_v6_final_complex1.skyd

17 Jul 2015 16:00:33,149 INFO : Expanding AB_Method_B_240transitions_5600_0514_2011_v6_final_complex1.sky.view

17 Jul 2015 16:00:33,149 INFO : Expanding AB_Method_B_240transitions_5600_0514_2011_v6_final_complex1.sky

17 Jul 2015 16:00:33,160 WARN : Input iRT database does not exist bovine_mix_110809_CEopt.irtdb

17 Jul 2015 16:00:33,217 INFO : Inserting 2194089|Beta

17 Jul 2015 16:00:34,058 INFO : Inserting 129823|Lactoperoxidase

17 Jul 2015 16:00:35,551 INFO : Inserting 00716246|Carbonic

17 Jul 2015 16:00:36,377 INFO : Inserting 188533Glutamate

17 Jul 2015 16:00:37,422 INFO : Inserting 118533|Glutamate

17 Jul 2015 16:00:42,292 INFO : Inserting 00706094|Alpha

17 Jul 2015 16:00:43,526 INFO : Inserting 1351907|Serum

17 Jul 2015 16:00:48,220 INFO : Completed import of Skyline document from AB_Method_B_240transitions_5600_0514_2011_v6_final_complex1_2015-02-07_10-45-16.sky.zip

17 Jul 2015 16:00:48,229 DEBUG: Finished trying to load data file file:/data/labkey/files/Panorama%20Public/2015/Schilling%20-%20MRM_HR_TripleTOF_MS2_FullScanFiltering/@files/export/xar/experiments_and_runs.xar.exploded/Run1125/AB_Method_B_240transitions_5600_0514_2011_v6_final_complex1_2015-02-07_10-45-16.sky.zip into the system

17 Jul 2015 16:00:48,230 INFO : Done importing xar

17 Jul 2015 16:00:48,241 INFO : Loading custom views

17 Jul 2015 16:00:48,265 INFO : 1 custom view imported

17 Jul 2015 16:00:48,265 INFO : Done importing custom views

17 Jul 2015 16:00:48,281 INFO : Loading pages and webpart properties

17 Jul 2015 16:00:48,338 INFO : Done importing pages and webpart properties

17 Jul 2015 16:00:48,338 INFO :

17 Jul 2015 16:00:48,339 INFO : Experiment import completed successfully.

17 Jul 2015 16:00:48,339 INFO : Successfully completed task 'org.labkey.targetedms.pipeline.ExperimentImportTask'

17 Jul 2015 16:00:48,371 INFO : Starting to run task 'org.labkey.targetedms.pipeline.CopyExperimentFinalTask' at location 'webserver'

17 Jul 2015 16:00:48,372 INFO :

17 Jul 2015 16:00:48,372 INFO : Finishing up experiment copy.

17 Jul 2015 16:00:48,375 INFO : Creating a new TargetedMS experiment entry in targetedms.ExperimentAnnotations.

17 Jul 2015 16:00:48,436 INFO : Updating access URL to point to the new copy of the data.

17 Jul 2015 16:00:48,490 INFO : Successfully completed task 'org.labkey.targetedms.pipeline.CopyExperimentFinalTask'