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OHSU - Barr-Gillespie Lab
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Data Pipeline
Raw Data
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Data Pipeline
Raw Data
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Protocols
Protocol: Skyline Document Import
Pou4f3-Gfp FACs DIA
Standard Properties
Name
Skyline Document Import
Contact
Instrument
Software
Description
Max input data per instance
Max input material per instance
0
Output data per instance
Output material per instance
Protocol Parameters
ApplicationLSIDTemplate
${RunLSIDBase}:SimpleProtocol.InputStep
ApplicationName
Skyline Document Import Protocol
Protocol Details
Material Inputs
Name
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Sample Set
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Data Inputs
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Material Outputs
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Data Outputs
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Protocol Steps
Step
Name
Description
1
Skyline Document Import
10
Skyline Document Import - Core
20
Skyline Document Import - Output
Runs Using This Protocol
Customize Grid
Default
Manage Views
Folder Filter
Folder Filter
Current folder
Current folder and subfolders
All folders
Create Chart
Create Crosstab Report
Create QC Trend Report
Excel
Text
Script
Files
XAR
Excel Workbook (.xlsx)
Maximum 1,048,576 rows and 16,384 columns.
Excel Old Binary Workbook (.xls)
Maximum 65,536 rows and 256 columns.
Refreshable Web Query (.iqy)
Column headers:
?
None
Caption
Field Key
Export selected rows
Export
Separator:
Tab
Comma
Colon
Semicolon
Quote:
Double (")
Single (')
Column headers:
?
None
Caption
Field Key
Export selected rows
Export
Java
JavaScript
Perl
Python
R
SAS
Stable URL
Create Script
Include all files
Include only selected files based on usage in run:
sky
File name:
Export
LSID output type:
Absolute
Folder relative
Partial folder relative
Export type:
Download to web browser
Write to exportedXars directory in pipeline
File name:
Export
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Created By
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FACs_DIA_Mostabundantproteins_ALLruns_final.sky.zip
2018-01-25
krey
Skyline Document Import
Mass spectrometry identification and quantitation of proteins from small pools of developing auditory and vestibular cells
Qexact_FACS_DIA_All_Myosins_Manual_Analysis.sky.zip
2018-01-22
krey
Skyline Document Import
Mass spectrometry identification and quantitation of proteins from small pools of developing auditory and vestibular cells
FACs_DIA_AllMyosins_FullLibrary_newversionanalysis_withQ_final.sky.zip
2018-01-22
krey
Skyline Document Import
Mass spectrometry identification and quantitation of proteins from small pools of developing auditory and vestibular cells