04 Apr 2023 17:01:38,105 DEBUG: Resetting Job ID: f5ca8c84-b572-103b-a13f-fea6ddf5751c

04 Apr 2023 17:14:07,542 INFO : Starting to run task 'org.labkey.targetedms.pipeline.TargetedMSImportTask' at location 'webserver-high-priority'

04 Apr 2023 17:14:07,546 INFO : Starting to import Skyline document from METRIC_Exploris_Tox_All_QCs_2023-04-04_20-01-32.sky.zip

04 Apr 2023 17:14:07,657 INFO : Expanding METRIC_Exploris_Tox_All_QCs.skyd

04 Apr 2023 17:14:08,641 INFO : Expanding METRIC_Exploris_Tox_All_QCs.sky

04 Apr 2023 17:14:08,651 WARN : The version of this Skyline document is 22.2. This is newer than the highest supported version 22.13

04 Apr 2023 17:14:08,656 INFO : 2% Done

04 Apr 2023 17:14:08,789 DEBUG: Starting to load chromatogram headers

04 Apr 2023 17:14:08,791 DEBUG: Done loading chromatogram headers

04 Apr 2023 17:14:09,145 INFO : Inserting gi|162648|gb|AAA51411.1|

04 Apr 2023 17:14:09,167 INFO : 10% Done

04 Apr 2023 17:14:09,290 INFO : 19% Done

04 Apr 2023 17:14:09,427 INFO : 26% Done

04 Apr 2023 17:14:09,566 INFO : 37% Done

04 Apr 2023 17:14:09,736 INFO : 49% Done

04 Apr 2023 17:14:09,915 INFO : 60% Done

04 Apr 2023 17:14:10,051 DEBUG: Total peptides inserted: 6

04 Apr 2023 17:14:10,052 INFO : Done parsing Skyline document.

04 Apr 2023 17:14:10,106 INFO : No group comparisons found.

04 Apr 2023 17:14:10,106 INFO : Calculating calibration curves

04 Apr 2023 17:14:10,107 DEBUG: Calculating calibration curve for gi|162648|gb|AAA51411.1|, 1 of 1

04 Apr 2023 17:14:10,267 INFO : 68% Done

04 Apr 2023 17:14:10,268 INFO : Done calculating calibration curves.

04 Apr 2023 17:14:10,275 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20230128_QC_BSA_002.raw in QC folder. 1 of 94

04 Apr 2023 17:14:10,280 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220909-QC_BSA-001_20220913083429.raw in QC folder. 2 of 94

04 Apr 2023 17:14:10,282 INFO : 69% Done

04 Apr 2023 17:14:10,287 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20221214-QC_BSA-001.raw in QC folder. 3 of 94

04 Apr 2023 17:14:10,292 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20221122_QC_BSA_003.raw in QC folder. 4 of 94

04 Apr 2023 17:14:10,297 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20221101-QC_BSA-005.raw in QC folder. 5 of 94

04 Apr 2023 17:14:10,298 INFO : 70% Done

04 Apr 2023 17:14:10,303 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20230128_QC_BSA_010.raw in QC folder. 6 of 94

04 Apr 2023 17:14:10,308 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220908-QC_BSA-001.raw in QC folder. 7 of 94

04 Apr 2023 17:14:10,313 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20230327-QC_BSA-009.raw in QC folder. 8 of 94

04 Apr 2023 17:14:10,314 INFO : 71% Done

04 Apr 2023 17:14:10,319 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20230128_QC_BSA_011.raw in QC folder. 9 of 94

04 Apr 2023 17:14:10,324 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220916-QC_BSA-006.raw in QC folder. 10 of 94

04 Apr 2023 17:14:10,329 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220819-QC_BSA-002.raw in QC folder. 11 of 94

04 Apr 2023 17:14:10,330 INFO : 72% Done

04 Apr 2023 17:14:10,335 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220902-QC_BSA-005.raw in QC folder. 12 of 94

04 Apr 2023 17:14:10,340 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20221122_QC_BSA_004.raw in QC folder. 13 of 94

04 Apr 2023 17:14:10,344 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20230128_QC_BSA_001.raw in QC folder. 14 of 94

04 Apr 2023 17:14:10,345 INFO : 73% Done

04 Apr 2023 17:14:10,350 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20230327-QC_BSA-008.raw in QC folder. 15 of 94

04 Apr 2023 17:14:10,357 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220916-QC_BSA-007.raw in QC folder. 16 of 94

04 Apr 2023 17:14:10,361 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220902-QC_BSA-006.raw in QC folder. 17 of 94

04 Apr 2023 17:14:10,366 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220819-QC_BSA-001.raw in QC folder. 18 of 94

04 Apr 2023 17:14:10,367 INFO : 74% Done

04 Apr 2023 17:14:10,372 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20221012-QC_BSA-004.raw in QC folder. 19 of 94

04 Apr 2023 17:14:10,377 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220902-QC_BSA-007.raw in QC folder. 20 of 94

04 Apr 2023 17:14:10,382 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220929-QC_BSA-003.raw in QC folder. 21 of 94

04 Apr 2023 17:14:10,383 INFO : 75% Done

04 Apr 2023 17:14:10,388 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220916-QC_BSA-008.raw in QC folder. 22 of 94

04 Apr 2023 17:14:10,393 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20221122_QC_BSA_005.raw in QC folder. 23 of 94

04 Apr 2023 17:14:10,398 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20230327-QC_BSA-007.raw in QC folder. 24 of 94

04 Apr 2023 17:14:10,399 INFO : 76% Done

04 Apr 2023 17:14:10,403 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20221101-QC_BSA-003.raw in QC folder. 25 of 94

04 Apr 2023 17:14:10,408 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20230327-QC_BSA-011.raw in QC folder. 26 of 94

04 Apr 2023 17:14:10,413 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20221122_QC_BSA_006.raw in QC folder. 27 of 94

04 Apr 2023 17:14:10,415 INFO : 77% Done

04 Apr 2023 17:14:10,420 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220929-QC_BSA-002.raw in QC folder. 28 of 94

04 Apr 2023 17:14:10,425 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220909-QC_BSA-001_20220911174000.raw in QC folder. 29 of 94

04 Apr 2023 17:14:10,430 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20230128_QC_BSA_004.raw in QC folder. 30 of 94

04 Apr 2023 17:14:10,431 INFO : 78% Done

04 Apr 2023 17:14:10,436 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20221014-QC_BSA-003.raw in QC folder. 31 of 94

04 Apr 2023 17:14:10,441 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220916-QC_BSA-002.raw in QC folder. 32 of 94

04 Apr 2023 17:14:10,446 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20230327-QC_BSA-006.raw in QC folder. 33 of 94

04 Apr 2023 17:14:10,447 INFO : 79% Done

04 Apr 2023 17:14:10,451 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220916-QC_BSA-009.raw in QC folder. 34 of 94

04 Apr 2023 17:14:10,456 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220902-QC_BSA-008.raw in QC folder. 35 of 94

04 Apr 2023 17:14:10,461 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20221101-QC_BSA-004.raw in QC folder. 36 of 94

04 Apr 2023 17:14:10,466 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20230217_QC_BSA_001.raw in QC folder. 37 of 94

04 Apr 2023 17:14:10,467 INFO : 80% Done

04 Apr 2023 17:14:10,472 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20230217_QC_BSA_002.raw in QC folder. 38 of 94

04 Apr 2023 17:14:10,477 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220929-QC_BSA-001.raw in QC folder. 39 of 94

04 Apr 2023 17:14:10,482 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20230327-QC_BSA-010.raw in QC folder. 40 of 94

04 Apr 2023 17:14:10,483 INFO : 81% Done

04 Apr 2023 17:14:10,488 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20230128_QC_BSA_003.raw in QC folder. 41 of 94

04 Apr 2023 17:14:10,493 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220916-QC_BSA-001.raw in QC folder. 42 of 94

04 Apr 2023 17:14:10,494 INFO : 82% Done

04 Apr 2023 17:14:10,499 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20221014-QC_BSA-004.raw in QC folder. 43 of 94

04 Apr 2023 17:14:10,504 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20221011-QC_BSA-001.raw in QC folder. 44 of 94

04 Apr 2023 17:14:10,509 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20230404-QC_BSA-004.raw in QC folder. 45 of 94

04 Apr 2023 17:14:10,514 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20230327-QC_BSA-013.raw in QC folder. 46 of 94

04 Apr 2023 17:14:10,515 INFO : 83% Done

04 Apr 2023 17:14:10,520 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20221014-QC_BSA-001.raw in QC folder. 47 of 94

04 Apr 2023 17:14:10,525 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20230128_QC_BSA_007.raw in QC folder. 48 of 94

04 Apr 2023 17:14:10,530 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20221101-QC_BSA-001_20221103135624.raw in QC folder. 49 of 94

04 Apr 2023 17:14:10,531 INFO : 84% Done

04 Apr 2023 17:14:10,536 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20230327-QC_BSA-005.raw in QC folder. 50 of 94

04 Apr 2023 17:14:10,541 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220829-QC_BSA-004.raw in QC folder. 51 of 94

04 Apr 2023 17:14:10,545 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220908-QC_BSA-005.raw in QC folder. 52 of 94

04 Apr 2023 17:14:10,546 INFO : 85% Done

04 Apr 2023 17:14:10,551 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220815-QC_BSA-004.raw in QC folder. 53 of 94

04 Apr 2023 17:14:10,556 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220829-QC_BSA-005.raw in QC folder. 54 of 94

04 Apr 2023 17:14:10,561 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20230327-QC_BSA-004.raw in QC folder. 55 of 94

04 Apr 2023 17:14:10,562 INFO : 86% Done

04 Apr 2023 17:14:10,567 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220902-QC_BSA-009.raw in QC folder. 56 of 94

04 Apr 2023 17:14:10,572 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20230128_QC_BSA_006.raw in QC folder. 57 of 94

04 Apr 2023 17:14:10,577 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20221011-QC_BSA-002.raw in QC folder. 58 of 94

04 Apr 2023 17:14:10,578 INFO : 87% Done

04 Apr 2023 17:14:10,583 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20230404-QC_BSA-003.raw in QC folder. 59 of 94

04 Apr 2023 17:14:10,588 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220902-QC_BSA-001.raw in QC folder. 60 of 94

04 Apr 2023 17:14:10,593 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220829-QC_BSA-003.raw in QC folder. 61 of 94

04 Apr 2023 17:14:10,594 INFO : 88% Done

04 Apr 2023 17:14:10,598 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220908-QC_BSA-004.raw in QC folder. 62 of 94

04 Apr 2023 17:14:10,603 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220909-QC_BSA-001.raw in QC folder. 63 of 94

04 Apr 2023 17:14:10,608 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220829-QC_BSA-006.raw in QC folder. 64 of 94

04 Apr 2023 17:14:10,613 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20230327-QC_BSA-003.raw in QC folder. 65 of 94

04 Apr 2023 17:14:10,614 INFO : 89% Done

04 Apr 2023 17:14:10,619 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20230128_QC_BSA_009.raw in QC folder. 66 of 94

04 Apr 2023 17:14:10,624 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20221101-QC_BSA-002.raw in QC folder. 67 of 94

04 Apr 2023 17:14:10,629 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20230327-QC_BSA-012.raw in QC folder. 68 of 94

04 Apr 2023 17:14:10,630 INFO : 90% Done

04 Apr 2023 17:14:10,635 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20221014-QC_BSA-002.raw in QC folder. 69 of 94

04 Apr 2023 17:14:10,640 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20230128_QC_BSA_005.raw in QC folder. 70 of 94

04 Apr 2023 17:14:10,645 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220902-QC_BSA-002.raw in QC folder. 71 of 94

04 Apr 2023 17:14:10,646 INFO : 91% Done

04 Apr 2023 17:14:10,651 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220829-QC_BSA-002.raw in QC folder. 72 of 94

04 Apr 2023 17:14:10,656 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220916-QC_BSA-011.raw in QC folder. 73 of 94

04 Apr 2023 17:14:10,661 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20230404-QC_BSA-002.raw in QC folder. 74 of 94

04 Apr 2023 17:14:10,662 INFO : 92% Done

04 Apr 2023 17:14:10,667 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220908-QC_BSA-003.raw in QC folder. 75 of 94

04 Apr 2023 17:14:10,672 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220902-QC_BSA-010.raw in QC folder. 76 of 94

04 Apr 2023 17:14:10,677 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20221122_QC_BSA_001.raw in QC folder. 77 of 94

04 Apr 2023 17:14:10,678 INFO : 93% Done

04 Apr 2023 17:14:10,683 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20221011-QC_BSA-005_20221012151604.raw in QC folder. 78 of 94

04 Apr 2023 17:14:10,689 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220902-QC_BSA-003.raw in QC folder. 79 of 94

04 Apr 2023 17:14:10,694 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20230327-QC_BSA-002.raw in QC folder. 80 of 94

04 Apr 2023 17:14:10,695 INFO : 94% Done

04 Apr 2023 17:14:10,700 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220829-QC_BSA-001.raw in QC folder. 81 of 94

04 Apr 2023 17:14:10,705 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20230327-QC_BSA-001.raw in QC folder. 82 of 94

04 Apr 2023 17:14:10,710 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220908-QC_BSA-002.raw in QC folder. 83 of 94

04 Apr 2023 17:14:10,715 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220916-QC_BSA-010.raw in QC folder. 84 of 94

04 Apr 2023 17:14:10,716 INFO : 95% Done

04 Apr 2023 17:14:10,721 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20230128_QC_BSA_008.raw in QC folder. 85 of 94

04 Apr 2023 17:14:10,725 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20221101-QC_BSA-001.raw in QC folder. 86 of 94

04 Apr 2023 17:14:10,730 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20230128_QC_BSA_012.raw in QC folder. 87 of 94

04 Apr 2023 17:14:10,731 INFO : 96% Done

04 Apr 2023 17:14:10,736 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20221122_QC_BSA_002.raw in QC folder. 88 of 94

04 Apr 2023 17:14:10,741 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20230404-QC_BSA-001.raw in QC folder. 89 of 94

04 Apr 2023 17:14:10,742 INFO : 97% Done

04 Apr 2023 17:14:10,747 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20221101-QC_BSA-005 - Copy.raw in QC folder. 90 of 94

04 Apr 2023 17:14:10,752 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20221011-QC_BSA-005.raw in QC folder. 91 of 94

04 Apr 2023 17:14:10,756 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220916-QC_BSA-005.raw in QC folder. 92 of 94

04 Apr 2023 17:14:10,761 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220817-QC_BSA-001.raw in QC folder. 93 of 94

04 Apr 2023 17:14:10,762 INFO : 98% Done

04 Apr 2023 17:14:10,767 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220902-QC_BSA-004.raw in QC folder. 94 of 94

04 Apr 2023 17:14:10,767 INFO : Done updating previously imported sample file data.

04 Apr 2023 17:14:11,359 INFO : All the related sampleFiles for /data/labkey/files/NCSU - METRIC/METRIC Internal/METRIC QC/Eclipse_Polk/@files/METRIC_Exploris_Tox_All_QCs_2023-04-04_18-50-06.sky.zip have been updated with newer data.

04 Apr 2023 17:14:11,359 INFO : Deleting /data/labkey/files/NCSU - METRIC/METRIC Internal/METRIC QC/Eclipse_Polk/@files/METRIC_Exploris_Tox_All_QCs_2023-04-04_18-50-06.sky.zip

04 Apr 2023 17:14:11,359 INFO : Deleting directory /data/labkey/files/NCSU - METRIC/METRIC Internal/METRIC QC/Eclipse_Polk/@files/METRIC_Exploris_Tox_All_QCs_2023-04-04_18-50-06

04 Apr 2023 17:14:11,359 INFO : Creating and populating temp tables for Proportion values

04 Apr 2023 17:14:11,422 INFO : Setting PrecursorModifiedAreaProportion values on precursorchrominfo

04 Apr 2023 17:14:11,443 INFO : Setting ModifiedAreaProportion values on generalmoleculechrominfo

04 Apr 2023 17:14:11,458 INFO : Cleaning up temp tables

04 Apr 2023 17:14:11,693 INFO : Completed import of Skyline document from METRIC_Exploris_Tox_All_QCs_2023-04-04_20-01-32.sky.zip

04 Apr 2023 17:14:11,695 INFO : 100% Done

04 Apr 2023 17:14:11,717 INFO : Successfully completed task 'org.labkey.targetedms.pipeline.TargetedMSImportTask'