04 Apr 2023 15:50:11,332 DEBUG: Resetting Job ID: e8ded8a1-b568-103b-a13f-fea6ddf5751c
04 Apr 2023 16:02:07,375 INFO : Starting to run task 'org.labkey.targetedms.pipeline.TargetedMSImportTask' at location 'webserver-high-priority'
04 Apr 2023 16:02:07,377 INFO : Starting to import Skyline document from METRIC_Exploris_Tox_All_QCs_2023-04-04_18-50-06.sky.zip
04 Apr 2023 16:02:07,452 INFO : Expanding METRIC_Exploris_Tox_All_QCs.skyd
04 Apr 2023 16:02:08,401 INFO : Expanding METRIC_Exploris_Tox_All_QCs.sky
04 Apr 2023 16:02:08,409 WARN : The version of this Skyline document is 22.2. This is newer than the highest supported version 22.13
04 Apr 2023 16:02:08,413 INFO : 2% Done
04 Apr 2023 16:02:08,545 DEBUG: Starting to load chromatogram headers
04 Apr 2023 16:02:08,547 DEBUG: Done loading chromatogram headers
04 Apr 2023 16:02:08,910 INFO : Inserting gi|162648|gb|AAA51411.1|
04 Apr 2023 16:02:08,933 INFO : 10% Done
04 Apr 2023 16:02:09,057 INFO : 19% Done
04 Apr 2023 16:02:09,189 INFO : 26% Done
04 Apr 2023 16:02:09,328 INFO : 37% Done
04 Apr 2023 16:02:09,503 INFO : 49% Done
04 Apr 2023 16:02:09,683 INFO : 60% Done
04 Apr 2023 16:02:09,817 DEBUG: Total peptides inserted: 6
04 Apr 2023 16:02:09,818 INFO : Done parsing Skyline document.
04 Apr 2023 16:02:09,871 INFO : No group comparisons found.
04 Apr 2023 16:02:09,871 INFO : Calculating calibration curves
04 Apr 2023 16:02:09,872 DEBUG: Calculating calibration curve for gi|162648|gb|AAA51411.1|, 1 of 1
04 Apr 2023 16:02:10,060 INFO : 68% Done
04 Apr 2023 16:02:10,062 INFO : Done calculating calibration curves.
04 Apr 2023 16:02:10,069 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20230128_QC_BSA_002.raw in QC folder. 1 of 93
04 Apr 2023 16:02:10,074 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220909-QC_BSA-001_20220913083429.raw in QC folder. 2 of 93
04 Apr 2023 16:02:10,075 INFO : 69% Done
04 Apr 2023 16:02:10,080 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20221214-QC_BSA-001.raw in QC folder. 3 of 93
04 Apr 2023 16:02:10,085 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20221122_QC_BSA_003.raw in QC folder. 4 of 93
04 Apr 2023 16:02:10,090 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20221101-QC_BSA-005.raw in QC folder. 5 of 93
04 Apr 2023 16:02:10,091 INFO : 70% Done
04 Apr 2023 16:02:10,096 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20230128_QC_BSA_010.raw in QC folder. 6 of 93
04 Apr 2023 16:02:10,101 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220908-QC_BSA-001.raw in QC folder. 7 of 93
04 Apr 2023 16:02:10,106 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20230327-QC_BSA-009.raw in QC folder. 8 of 93
04 Apr 2023 16:02:10,107 INFO : 71% Done
04 Apr 2023 16:02:10,112 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20230128_QC_BSA_011.raw in QC folder. 9 of 93
04 Apr 2023 16:02:10,116 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220916-QC_BSA-006.raw in QC folder. 10 of 93
04 Apr 2023 16:02:10,121 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220819-QC_BSA-002.raw in QC folder. 11 of 93
04 Apr 2023 16:02:10,122 INFO : 72% Done
04 Apr 2023 16:02:10,127 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220902-QC_BSA-005.raw in QC folder. 12 of 93
04 Apr 2023 16:02:10,132 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20221122_QC_BSA_004.raw in QC folder. 13 of 93
04 Apr 2023 16:02:10,136 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20230128_QC_BSA_001.raw in QC folder. 14 of 93
04 Apr 2023 16:02:10,137 INFO : 73% Done
04 Apr 2023 16:02:10,142 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20230327-QC_BSA-008.raw in QC folder. 15 of 93
04 Apr 2023 16:02:10,147 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220916-QC_BSA-007.raw in QC folder. 16 of 93
04 Apr 2023 16:02:10,152 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220902-QC_BSA-006.raw in QC folder. 17 of 93
04 Apr 2023 16:02:10,157 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220819-QC_BSA-001.raw in QC folder. 18 of 93
04 Apr 2023 16:02:10,158 INFO : 74% Done
04 Apr 2023 16:02:10,163 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20221012-QC_BSA-004.raw in QC folder. 19 of 93
04 Apr 2023 16:02:10,168 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220902-QC_BSA-007.raw in QC folder. 20 of 93
04 Apr 2023 16:02:10,168 INFO : 75% Done
04 Apr 2023 16:02:10,174 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220929-QC_BSA-003.raw in QC folder. 21 of 93
04 Apr 2023 16:02:10,178 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220916-QC_BSA-008.raw in QC folder. 22 of 93
04 Apr 2023 16:02:10,183 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20221122_QC_BSA_005.raw in QC folder. 23 of 93
04 Apr 2023 16:02:10,184 INFO : 76% Done
04 Apr 2023 16:02:10,189 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20230327-QC_BSA-007.raw in QC folder. 24 of 93
04 Apr 2023 16:02:10,194 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20221101-QC_BSA-003.raw in QC folder. 25 of 93
04 Apr 2023 16:02:10,198 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20230327-QC_BSA-011.raw in QC folder. 26 of 93
04 Apr 2023 16:02:10,203 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20221122_QC_BSA_006.raw in QC folder. 27 of 93
04 Apr 2023 16:02:10,204 INFO : 77% Done
04 Apr 2023 16:02:10,209 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220929-QC_BSA-002.raw in QC folder. 28 of 93
04 Apr 2023 16:02:10,214 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220909-QC_BSA-001_20220911174000.raw in QC folder. 29 of 93
04 Apr 2023 16:02:10,218 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20230128_QC_BSA_004.raw in QC folder. 30 of 93
04 Apr 2023 16:02:10,219 INFO : 78% Done
04 Apr 2023 16:02:10,224 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20221014-QC_BSA-003.raw in QC folder. 31 of 93
04 Apr 2023 16:02:10,229 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220916-QC_BSA-002.raw in QC folder. 32 of 93
04 Apr 2023 16:02:10,234 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20230327-QC_BSA-006.raw in QC folder. 33 of 93
04 Apr 2023 16:02:10,235 INFO : 79% Done
04 Apr 2023 16:02:10,239 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220916-QC_BSA-009.raw in QC folder. 34 of 93
04 Apr 2023 16:02:10,244 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220902-QC_BSA-008.raw in QC folder. 35 of 93
04 Apr 2023 16:02:10,249 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20221101-QC_BSA-004.raw in QC folder. 36 of 93
04 Apr 2023 16:02:10,250 INFO : 80% Done
04 Apr 2023 16:02:10,254 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20230217_QC_BSA_001.raw in QC folder. 37 of 93
04 Apr 2023 16:02:10,259 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20230217_QC_BSA_002.raw in QC folder. 38 of 93
04 Apr 2023 16:02:10,264 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220929-QC_BSA-001.raw in QC folder. 39 of 93
04 Apr 2023 16:02:10,265 INFO : 81% Done
04 Apr 2023 16:02:10,270 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20230327-QC_BSA-010.raw in QC folder. 40 of 93
04 Apr 2023 16:02:10,274 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20230128_QC_BSA_003.raw in QC folder. 41 of 93
04 Apr 2023 16:02:10,279 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220916-QC_BSA-001.raw in QC folder. 42 of 93
04 Apr 2023 16:02:10,280 INFO : 82% Done
04 Apr 2023 16:02:10,285 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20221014-QC_BSA-004.raw in QC folder. 43 of 93
04 Apr 2023 16:02:10,290 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20221011-QC_BSA-001.raw in QC folder. 44 of 93
04 Apr 2023 16:02:10,294 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20230327-QC_BSA-013.raw in QC folder. 45 of 93
04 Apr 2023 16:02:10,299 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20221014-QC_BSA-001.raw in QC folder. 46 of 93
04 Apr 2023 16:02:10,300 INFO : 83% Done
04 Apr 2023 16:02:10,305 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20230128_QC_BSA_007.raw in QC folder. 47 of 93
04 Apr 2023 16:02:10,310 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20221101-QC_BSA-001_20221103135624.raw in QC folder. 48 of 93
04 Apr 2023 16:02:10,311 INFO : 84% Done
04 Apr 2023 16:02:10,315 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20230327-QC_BSA-005.raw in QC folder. 49 of 93
04 Apr 2023 16:02:10,320 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220829-QC_BSA-004.raw in QC folder. 50 of 93
04 Apr 2023 16:02:10,325 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220908-QC_BSA-005.raw in QC folder. 51 of 93
04 Apr 2023 16:02:10,326 INFO : 85% Done
04 Apr 2023 16:02:10,331 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220815-QC_BSA-004.raw in QC folder. 52 of 93
04 Apr 2023 16:02:10,335 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220829-QC_BSA-005.raw in QC folder. 53 of 93
04 Apr 2023 16:02:10,340 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20230327-QC_BSA-004.raw in QC folder. 54 of 93
04 Apr 2023 16:02:10,345 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220902-QC_BSA-009.raw in QC folder. 55 of 93
04 Apr 2023 16:02:10,346 INFO : 86% Done
04 Apr 2023 16:02:10,351 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20230128_QC_BSA_006.raw in QC folder. 56 of 93
04 Apr 2023 16:02:10,356 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20221011-QC_BSA-002.raw in QC folder. 57 of 93
04 Apr 2023 16:02:10,361 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20230404-QC_BSA-003.raw in QC folder. 58 of 93
04 Apr 2023 16:02:10,362 INFO : 87% Done
04 Apr 2023 16:02:10,367 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220902-QC_BSA-001.raw in QC folder. 59 of 93
04 Apr 2023 16:02:10,371 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220829-QC_BSA-003.raw in QC folder. 60 of 93
04 Apr 2023 16:02:10,372 INFO : 88% Done
04 Apr 2023 16:02:10,377 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220908-QC_BSA-004.raw in QC folder. 61 of 93
04 Apr 2023 16:02:10,382 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220909-QC_BSA-001.raw in QC folder. 62 of 93
04 Apr 2023 16:02:10,387 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220829-QC_BSA-006.raw in QC folder. 63 of 93
04 Apr 2023 16:02:10,392 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20230327-QC_BSA-003.raw in QC folder. 64 of 93
04 Apr 2023 16:02:10,393 INFO : 89% Done
04 Apr 2023 16:02:10,398 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20230128_QC_BSA_009.raw in QC folder. 65 of 93
04 Apr 2023 16:02:10,403 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20221101-QC_BSA-002.raw in QC folder. 66 of 93
04 Apr 2023 16:02:10,408 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20230327-QC_BSA-012.raw in QC folder. 67 of 93
04 Apr 2023 16:02:10,408 INFO : 90% Done
04 Apr 2023 16:02:10,413 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20221014-QC_BSA-002.raw in QC folder. 68 of 93
04 Apr 2023 16:02:10,418 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20230128_QC_BSA_005.raw in QC folder. 69 of 93
04 Apr 2023 16:02:10,423 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220902-QC_BSA-002.raw in QC folder. 70 of 93
04 Apr 2023 16:02:10,424 INFO : 91% Done
04 Apr 2023 16:02:10,429 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220829-QC_BSA-002.raw in QC folder. 71 of 93
04 Apr 2023 16:02:10,435 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220916-QC_BSA-011.raw in QC folder. 72 of 93
04 Apr 2023 16:02:10,439 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20230404-QC_BSA-002.raw in QC folder. 73 of 93
04 Apr 2023 16:02:10,444 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220908-QC_BSA-003.raw in QC folder. 74 of 93
04 Apr 2023 16:02:10,445 INFO : 92% Done
04 Apr 2023 16:02:10,450 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220902-QC_BSA-010.raw in QC folder. 75 of 93
04 Apr 2023 16:02:10,455 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20221122_QC_BSA_001.raw in QC folder. 76 of 93
04 Apr 2023 16:02:10,455 INFO : 93% Done
04 Apr 2023 16:02:10,460 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20221011-QC_BSA-005_20221012151604.raw in QC folder. 77 of 93
04 Apr 2023 16:02:10,465 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220902-QC_BSA-003.raw in QC folder. 78 of 93
04 Apr 2023 16:02:10,470 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20230327-QC_BSA-002.raw in QC folder. 79 of 93
04 Apr 2023 16:02:10,470 INFO : 94% Done
04 Apr 2023 16:02:10,475 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220829-QC_BSA-001.raw in QC folder. 80 of 93
04 Apr 2023 16:02:10,480 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20230327-QC_BSA-001.raw in QC folder. 81 of 93
04 Apr 2023 16:02:10,485 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220908-QC_BSA-002.raw in QC folder. 82 of 93
04 Apr 2023 16:02:10,490 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220916-QC_BSA-010.raw in QC folder. 83 of 93
04 Apr 2023 16:02:10,490 INFO : 95% Done
04 Apr 2023 16:02:10,495 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20230128_QC_BSA_008.raw in QC folder. 84 of 93
04 Apr 2023 16:02:10,500 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20221101-QC_BSA-001.raw in QC folder. 85 of 93
04 Apr 2023 16:02:10,505 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20230128_QC_BSA_012.raw in QC folder. 86 of 93
04 Apr 2023 16:02:10,506 INFO : 96% Done
04 Apr 2023 16:02:10,510 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20221122_QC_BSA_002.raw in QC folder. 87 of 93
04 Apr 2023 16:02:10,515 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20230404-QC_BSA-001.raw in QC folder. 88 of 93
04 Apr 2023 16:02:10,516 INFO : 97% Done
04 Apr 2023 16:02:10,521 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20221101-QC_BSA-005 - Copy.raw in QC folder. 89 of 93
04 Apr 2023 16:02:10,526 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20221011-QC_BSA-005.raw in QC folder. 90 of 93
04 Apr 2023 16:02:10,530 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220916-QC_BSA-005.raw in QC folder. 91 of 93
04 Apr 2023 16:02:10,535 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220817-QC_BSA-001.raw in QC folder. 92 of 93
04 Apr 2023 16:02:10,536 INFO : 98% Done
04 Apr 2023 16:02:10,541 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220902-QC_BSA-004.raw in QC folder. 93 of 93
04 Apr 2023 16:02:10,541 INFO : Done updating previously imported sample file data.
04 Apr 2023 16:02:11,184 INFO : All the related sampleFiles for /data/labkey/files/NCSU - METRIC/METRIC Internal/METRIC QC/Eclipse_Polk/@files/METRIC_Exploris_Tox_All_QCs_2023-04-04_17-37-37.sky.zip have been updated with newer data.
04 Apr 2023 16:02:11,185 INFO : Deleting /data/labkey/files/NCSU - METRIC/METRIC Internal/METRIC QC/Eclipse_Polk/@files/METRIC_Exploris_Tox_All_QCs_2023-04-04_17-37-37.sky.zip
04 Apr 2023 16:02:11,185 INFO : Deleting directory /data/labkey/files/NCSU - METRIC/METRIC Internal/METRIC QC/Eclipse_Polk/@files/METRIC_Exploris_Tox_All_QCs_2023-04-04_17-37-37
04 Apr 2023 16:02:11,185 INFO : Creating and populating temp tables for Proportion values
04 Apr 2023 16:02:11,258 INFO : Setting PrecursorModifiedAreaProportion values on precursorchrominfo
04 Apr 2023 16:02:11,282 INFO : Setting ModifiedAreaProportion values on generalmoleculechrominfo
04 Apr 2023 16:02:11,298 INFO : Cleaning up temp tables
04 Apr 2023 16:02:11,537 INFO : Completed import of Skyline document from METRIC_Exploris_Tox_All_QCs_2023-04-04_18-50-06.sky.zip
04 Apr 2023 16:02:11,539 INFO : 100% Done
04 Apr 2023 16:02:11,567 INFO : Successfully completed task 'org.labkey.targetedms.pipeline.TargetedMSImportTask'