30 Mar 2023 14:40:27,077 DEBUG: Resetting Job ID: becd75e6-b170-103b-a3e9-fea6ddf59764

30 Mar 2023 14:40:27,096 INFO : Starting to run task 'org.labkey.targetedms.pipeline.TargetedMSImportTask' at location 'webserver-high-priority'

30 Mar 2023 14:40:27,097 INFO : Starting to import Skyline document from METRIC_Exploris_Tox_All_QCs_2023-03-30_17-40-22.sky.zip

30 Mar 2023 14:40:27,097 INFO : Expanding METRIC_Exploris_Tox_All_QCs.skyd

30 Mar 2023 14:40:27,673 INFO : Expanding METRIC_Exploris_Tox_All_QCs.sky

30 Mar 2023 14:40:27,682 WARN : The version of this Skyline document is 22.2. This is newer than the highest supported version 22.13

30 Mar 2023 14:40:27,690 INFO : 2% Done

30 Mar 2023 14:40:27,938 DEBUG: Starting to load chromatogram headers

30 Mar 2023 14:40:27,940 DEBUG: Done loading chromatogram headers

30 Mar 2023 14:40:28,308 INFO : Inserting gi|162648|gb|AAA51411.1|

30 Mar 2023 14:40:28,329 INFO : 9% Done

30 Mar 2023 14:40:28,439 INFO : 19% Done

30 Mar 2023 14:40:28,556 INFO : 26% Done

30 Mar 2023 14:40:28,680 INFO : 37% Done

30 Mar 2023 14:40:28,837 INFO : 49% Done

30 Mar 2023 14:40:28,997 INFO : 60% Done

30 Mar 2023 14:40:29,113 DEBUG: Total peptides inserted: 6

30 Mar 2023 14:40:29,114 INFO : Done parsing Skyline document.

30 Mar 2023 14:40:29,167 INFO : No group comparisons found.

30 Mar 2023 14:40:29,167 INFO : Calculating calibration curves

30 Mar 2023 14:40:29,167 DEBUG: Calculating calibration curve for gi|162648|gb|AAA51411.1|, 1 of 1

30 Mar 2023 14:40:29,345 INFO : 68% Done

30 Mar 2023 14:40:29,346 INFO : Done calculating calibration curves.

30 Mar 2023 14:40:29,353 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20230128_QC_BSA_002.raw in QC folder. 1 of 84

30 Mar 2023 14:40:29,358 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220909-QC_BSA-001_20220913083429.raw in QC folder. 2 of 84

30 Mar 2023 14:40:29,359 INFO : 69% Done

30 Mar 2023 14:40:29,365 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20221214-QC_BSA-001.raw in QC folder. 3 of 84

30 Mar 2023 14:40:29,370 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20221122_QC_BSA_003.raw in QC folder. 4 of 84

30 Mar 2023 14:40:29,371 INFO : 70% Done

30 Mar 2023 14:40:29,377 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20221101-QC_BSA-005.raw in QC folder. 5 of 84

30 Mar 2023 14:40:29,382 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20230128_QC_BSA_010.raw in QC folder. 6 of 84

30 Mar 2023 14:40:29,388 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220908-QC_BSA-001.raw in QC folder. 7 of 84

30 Mar 2023 14:40:29,393 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20230128_QC_BSA_011.raw in QC folder. 8 of 84

30 Mar 2023 14:40:29,394 INFO : 71% Done

30 Mar 2023 14:40:29,400 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220916-QC_BSA-006.raw in QC folder. 9 of 84

30 Mar 2023 14:40:29,405 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220819-QC_BSA-002.raw in QC folder. 10 of 84

30 Mar 2023 14:40:29,406 INFO : 72% Done

30 Mar 2023 14:40:29,414 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220902-QC_BSA-005.raw in QC folder. 11 of 84

30 Mar 2023 14:40:29,422 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20221122_QC_BSA_004.raw in QC folder. 12 of 84

30 Mar 2023 14:40:29,429 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20230128_QC_BSA_001.raw in QC folder. 13 of 84

30 Mar 2023 14:40:29,430 INFO : 73% Done

30 Mar 2023 14:40:29,436 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20230327-QC_BSA-008.raw in QC folder. 14 of 84

30 Mar 2023 14:40:29,441 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220916-QC_BSA-007.raw in QC folder. 15 of 84

30 Mar 2023 14:40:29,446 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220902-QC_BSA-006.raw in QC folder. 16 of 84

30 Mar 2023 14:40:29,448 INFO : 74% Done

30 Mar 2023 14:40:29,453 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220819-QC_BSA-001.raw in QC folder. 17 of 84

30 Mar 2023 14:40:29,458 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20221012-QC_BSA-004.raw in QC folder. 18 of 84

30 Mar 2023 14:40:29,464 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220902-QC_BSA-007.raw in QC folder. 19 of 84

30 Mar 2023 14:40:29,468 INFO : 75% Done

30 Mar 2023 14:40:29,473 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220929-QC_BSA-003.raw in QC folder. 20 of 84

30 Mar 2023 14:40:29,479 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220916-QC_BSA-008.raw in QC folder. 21 of 84

30 Mar 2023 14:40:29,480 INFO : 76% Done

30 Mar 2023 14:40:29,485 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20221122_QC_BSA_005.raw in QC folder. 22 of 84

30 Mar 2023 14:40:29,490 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20230327-QC_BSA-007.raw in QC folder. 23 of 84

30 Mar 2023 14:40:29,496 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20221101-QC_BSA-003.raw in QC folder. 24 of 84

30 Mar 2023 14:40:29,497 INFO : 77% Done

30 Mar 2023 14:40:29,502 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20221122_QC_BSA_006.raw in QC folder. 25 of 84

30 Mar 2023 14:40:29,507 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220929-QC_BSA-002.raw in QC folder. 26 of 84

30 Mar 2023 14:40:29,513 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220909-QC_BSA-001_20220911174000.raw in QC folder. 27 of 84

30 Mar 2023 14:40:29,514 INFO : 78% Done

30 Mar 2023 14:40:29,519 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20230128_QC_BSA_004.raw in QC folder. 28 of 84

30 Mar 2023 14:40:29,527 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20221014-QC_BSA-003.raw in QC folder. 29 of 84

30 Mar 2023 14:40:29,528 INFO : 79% Done

30 Mar 2023 14:40:29,533 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220916-QC_BSA-002.raw in QC folder. 30 of 84

30 Mar 2023 14:40:29,538 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20230327-QC_BSA-006.raw in QC folder. 31 of 84

30 Mar 2023 14:40:29,543 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220916-QC_BSA-009.raw in QC folder. 32 of 84

30 Mar 2023 14:40:29,549 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220902-QC_BSA-008.raw in QC folder. 33 of 84

30 Mar 2023 14:40:29,550 INFO : 80% Done

30 Mar 2023 14:40:29,555 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20221101-QC_BSA-004.raw in QC folder. 34 of 84

30 Mar 2023 14:40:29,560 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20230217_QC_BSA_001.raw in QC folder. 35 of 84

30 Mar 2023 14:40:29,562 INFO : 81% Done

30 Mar 2023 14:40:29,567 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20230217_QC_BSA_002.raw in QC folder. 36 of 84

30 Mar 2023 14:40:29,572 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220929-QC_BSA-001.raw in QC folder. 37 of 84

30 Mar 2023 14:40:29,577 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20230128_QC_BSA_003.raw in QC folder. 38 of 84

30 Mar 2023 14:40:29,578 INFO : 82% Done

30 Mar 2023 14:40:29,584 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220916-QC_BSA-001.raw in QC folder. 39 of 84

30 Mar 2023 14:40:29,589 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20221014-QC_BSA-004.raw in QC folder. 40 of 84

30 Mar 2023 14:40:29,594 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20221011-QC_BSA-001.raw in QC folder. 41 of 84

30 Mar 2023 14:40:29,595 INFO : 83% Done

30 Mar 2023 14:40:29,601 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20221014-QC_BSA-001.raw in QC folder. 42 of 84

30 Mar 2023 14:40:29,606 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20230128_QC_BSA_007.raw in QC folder. 43 of 84

30 Mar 2023 14:40:29,611 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20221101-QC_BSA-001_20221103135624.raw in QC folder. 44 of 84

30 Mar 2023 14:40:29,612 INFO : 84% Done

30 Mar 2023 14:40:29,617 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20230327-QC_BSA-005.raw in QC folder. 45 of 84

30 Mar 2023 14:40:29,623 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220829-QC_BSA-004.raw in QC folder. 46 of 84

30 Mar 2023 14:40:29,624 INFO : 85% Done

30 Mar 2023 14:40:29,630 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220908-QC_BSA-005.raw in QC folder. 47 of 84

30 Mar 2023 14:40:29,635 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220815-QC_BSA-004.raw in QC folder. 48 of 84

30 Mar 2023 14:40:29,641 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220829-QC_BSA-005.raw in QC folder. 49 of 84

30 Mar 2023 14:40:29,646 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220902-QC_BSA-009.raw in QC folder. 50 of 84

30 Mar 2023 14:40:29,647 INFO : 86% Done

30 Mar 2023 14:40:29,652 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20230128_QC_BSA_006.raw in QC folder. 51 of 84

30 Mar 2023 14:40:29,657 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20221011-QC_BSA-002.raw in QC folder. 52 of 84

30 Mar 2023 14:40:29,658 INFO : 87% Done

30 Mar 2023 14:40:29,664 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220902-QC_BSA-001.raw in QC folder. 53 of 84

30 Mar 2023 14:40:29,669 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220829-QC_BSA-003.raw in QC folder. 54 of 84

30 Mar 2023 14:40:29,674 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220908-QC_BSA-004.raw in QC folder. 55 of 84

30 Mar 2023 14:40:29,675 INFO : 88% Done

30 Mar 2023 14:40:29,680 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220909-QC_BSA-001.raw in QC folder. 56 of 84

30 Mar 2023 14:40:29,686 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220829-QC_BSA-006.raw in QC folder. 57 of 84

30 Mar 2023 14:40:29,691 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20230327-QC_BSA-003.raw in QC folder. 58 of 84

30 Mar 2023 14:40:29,692 INFO : 89% Done

30 Mar 2023 14:40:29,698 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20230128_QC_BSA_009.raw in QC folder. 59 of 84

30 Mar 2023 14:40:29,703 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20221101-QC_BSA-002.raw in QC folder. 60 of 84

30 Mar 2023 14:40:29,709 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20221014-QC_BSA-002.raw in QC folder. 61 of 84

30 Mar 2023 14:40:29,711 INFO : 90% Done

30 Mar 2023 14:40:29,717 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20230128_QC_BSA_005.raw in QC folder. 62 of 84

30 Mar 2023 14:40:29,722 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220902-QC_BSA-002.raw in QC folder. 63 of 84

30 Mar 2023 14:40:29,724 INFO : 91% Done

30 Mar 2023 14:40:29,730 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220829-QC_BSA-002.raw in QC folder. 64 of 84

30 Mar 2023 14:40:29,736 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220916-QC_BSA-011.raw in QC folder. 65 of 84

30 Mar 2023 14:40:29,741 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220908-QC_BSA-003.raw in QC folder. 66 of 84

30 Mar 2023 14:40:29,743 INFO : 92% Done

30 Mar 2023 14:40:29,748 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220902-QC_BSA-010.raw in QC folder. 67 of 84

30 Mar 2023 14:40:29,754 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20221122_QC_BSA_001.raw in QC folder. 68 of 84

30 Mar 2023 14:40:29,760 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20221011-QC_BSA-005_20221012151604.raw in QC folder. 69 of 84

30 Mar 2023 14:40:29,761 INFO : 93% Done

30 Mar 2023 14:40:29,767 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220902-QC_BSA-003.raw in QC folder. 70 of 84

30 Mar 2023 14:40:29,773 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20230327-QC_BSA-002.raw in QC folder. 71 of 84

30 Mar 2023 14:40:29,774 INFO : 94% Done

30 Mar 2023 14:40:29,780 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220829-QC_BSA-001.raw in QC folder. 72 of 84

30 Mar 2023 14:40:29,785 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20230327-QC_BSA-001.raw in QC folder. 73 of 84

30 Mar 2023 14:40:29,791 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220908-QC_BSA-002.raw in QC folder. 74 of 84

30 Mar 2023 14:40:29,797 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220916-QC_BSA-010.raw in QC folder. 75 of 84

30 Mar 2023 14:40:29,798 INFO : 95% Done

30 Mar 2023 14:40:29,804 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20230128_QC_BSA_008.raw in QC folder. 76 of 84

30 Mar 2023 14:40:29,810 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20221101-QC_BSA-001.raw in QC folder. 77 of 84

30 Mar 2023 14:40:29,811 INFO : 96% Done

30 Mar 2023 14:40:29,817 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20230128_QC_BSA_012.raw in QC folder. 78 of 84

30 Mar 2023 14:40:29,822 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20221122_QC_BSA_002.raw in QC folder. 79 of 84

30 Mar 2023 14:40:29,828 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20221101-QC_BSA-005 - Copy.raw in QC folder. 80 of 84

30 Mar 2023 14:40:29,830 INFO : 97% Done

30 Mar 2023 14:40:29,835 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20221011-QC_BSA-005.raw in QC folder. 81 of 84

30 Mar 2023 14:40:29,841 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220916-QC_BSA-005.raw in QC folder. 82 of 84

30 Mar 2023 14:40:29,847 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220817-QC_BSA-001.raw in QC folder. 83 of 84

30 Mar 2023 14:40:29,848 INFO : 98% Done

30 Mar 2023 14:40:29,854 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220902-QC_BSA-004.raw in QC folder. 84 of 84

30 Mar 2023 14:40:29,854 INFO : Done updating previously imported sample file data.

30 Mar 2023 14:40:30,521 INFO : All the related sampleFiles for /data/labkey/files/NCSU - METRIC/METRIC Internal/METRIC QC/Eclipse_Polk/@files/METRIC_Exploris_Tox_All_QCs_2023-03-30_17-39-43.sky.zip have been updated with newer data.

30 Mar 2023 14:40:30,521 INFO : Deleting /data/labkey/files/NCSU - METRIC/METRIC Internal/METRIC QC/Eclipse_Polk/@files/METRIC_Exploris_Tox_All_QCs_2023-03-30_17-39-43.sky.zip

30 Mar 2023 14:40:30,521 INFO : Deleting directory /data/labkey/files/NCSU - METRIC/METRIC Internal/METRIC QC/Eclipse_Polk/@files/METRIC_Exploris_Tox_All_QCs_2023-03-30_17-39-43

30 Mar 2023 14:40:30,521 INFO : Creating and populating temp tables for Proportion values

30 Mar 2023 14:40:30,586 INFO : Setting PrecursorModifiedAreaProportion values on precursorchrominfo

30 Mar 2023 14:40:30,606 INFO : Setting ModifiedAreaProportion values on generalmoleculechrominfo

30 Mar 2023 14:40:30,620 INFO : Cleaning up temp tables

30 Mar 2023 14:40:30,870 INFO : Completed import of Skyline document from METRIC_Exploris_Tox_All_QCs_2023-03-30_17-40-22.sky.zip

30 Mar 2023 14:40:30,872 INFO : 100% Done

30 Mar 2023 14:40:30,893 INFO : Successfully completed task 'org.labkey.targetedms.pipeline.TargetedMSImportTask'