08 Aug 2025 20:11:01,170 DEBUG: Resetting Job ID: 5d78919f-56fc-103e-8e6e-1cc91aa98000
08 Aug 2025 20:11:01,189 INFO : Starting to run task 'org.labkey.targetedms.pipeline.TargetedMSImportTask' at location 'webserver-high-priority'
08 Aug 2025 20:11:01,190 INFO : Starting to import Skyline document from METRIC_Eclipse_PSB_All_QCs_2025-08-08_23-10-58.sky.zip
08 Aug 2025 20:11:01,190 INFO : Expanding METRIC_Eclipse_PSB_All_QCs.skyd
08 Aug 2025 20:11:01,443 INFO : Expanding METRIC_Eclipse_PSB_All_QCs.sky
08 Aug 2025 20:11:01,448 INFO : Reading Skyline file, METRIC_Eclipse_PSB_All_QCs.sky, to determine if the TransitionChromInfos in the document should be stored...
08 Aug 2025 20:11:01,453 INFO : TransitionChromInfo counts or precursor counts are within the allowed limits. TransitionChromInfos will be stored
08 Aug 2025 20:11:01,453 WARN : The version of this Skyline document is 25.1. This is newer than the highest supported version 23.1
08 Aug 2025 20:11:01,455 INFO : 2% Done
08 Aug 2025 20:11:01,455 INFO : Copying SKYD to temp directory for import purposes
08 Aug 2025 20:11:01,545 INFO : Copying complete
08 Aug 2025 20:11:01,545 DEBUG: Starting to load chromatogram headers
08 Aug 2025 20:11:01,546 DEBUG: Done loading chromatogram headers
08 Aug 2025 20:11:01,758 INFO : Inserting gi|162648|gb|AAA51411.1|
08 Aug 2025 20:11:01,764 INFO : 10% Done
08 Aug 2025 20:11:01,795 INFO : 19% Done
08 Aug 2025 20:11:01,832 INFO : 26% Done
08 Aug 2025 20:11:01,863 INFO : 37% Done
08 Aug 2025 20:11:01,905 INFO : 48% Done
08 Aug 2025 20:11:01,948 INFO : 60% Done
08 Aug 2025 20:11:01,992 DEBUG: Total peptides inserted: 6
08 Aug 2025 20:11:01,992 INFO : Done parsing Skyline document.
08 Aug 2025 20:11:02,048 INFO : No group comparisons found.
08 Aug 2025 20:11:02,048 INFO : Calculating calibration curves
08 Aug 2025 20:11:02,048 DEBUG: Calculating calibration curve for gi|162648|gb|AAA51411.1|, 1 of 1
08 Aug 2025 20:11:02,130 INFO : 68% Done
08 Aug 2025 20:11:02,131 INFO : Done calculating calibration curves.
08 Aug 2025 20:11:02,132 INFO : Updating previously imported data for 36 old sample files.
08 Aug 2025 20:11:02,132 DEBUG: Found data for the following old sample files in the QC folder:
08 Aug 2025 20:11:02,132 DEBUG: D:\QC\QC_BSA\20250603_BSA-QC-01.raw
08 Aug 2025 20:11:02,132 DEBUG: D:\QC\QC_BSA\20250214_BSA-QC_004.raw
08 Aug 2025 20:11:02,132 DEBUG: D:\QC\QC_BSA\20250606_BSA-QC-04.raw
08 Aug 2025 20:11:02,132 DEBUG: D:\QC\QC_BSA\20220410_QC_BSA-001.raw
08 Aug 2025 20:11:02,132 DEBUG: D:\QC\QC_BSA\20240126_QC_BSA-003_20250524065009.raw
08 Aug 2025 20:11:02,132 DEBUG: D:\QC\QC_BSA\20250214_BSA-QC_005.raw
08 Aug 2025 20:11:02,132 DEBUG: D:\QC\QC_BSA\20241021-Kritika-AmylinLiverCD11c-DDA_004.raw
08 Aug 2025 20:11:02,132 DEBUG: D:\QC\QC_BSA\20250606_BSA-QC-03.raw
08 Aug 2025 20:11:02,132 DEBUG: D:\QC\QC_BSA\20250625-QC-BSA-1.raw
08 Aug 2025 20:11:02,132 DEBUG: D:\QC\QC_BSA\20250624-QC-BSA-1.raw
08 Aug 2025 20:11:02,132 DEBUG: D:\QC\QC_BSA\20241021_BSA-QC-01.raw
08 Aug 2025 20:11:02,132 DEBUG: D:\QC\QC_BSA\20250214_BSA-QC_006.raw
08 Aug 2025 20:11:02,132 DEBUG: D:\QC\QC_BSA\20250410_QC_BSA-002.raw
08 Aug 2025 20:11:02,132 DEBUG: D:\QC\QC_BSA\20250805-QC-BSA-3.raw
08 Aug 2025 20:11:02,132 DEBUG: D:\QC\QC_BSA\20241021_BSA-QC-05.raw
08 Aug 2025 20:11:02,132 DEBUG: D:\QC\QC_BSA\20241021_BSA-QC-01_20241021152050.raw
08 Aug 2025 20:11:02,132 DEBUG: D:\QC\QC_BSA\20240126_QC_BSA-003_20250523094527.raw
08 Aug 2025 20:11:02,132 DEBUG: D:\QC\QC_BSA\20250520_QC_BSA-001_20250520195858.raw
08 Aug 2025 20:11:02,132 DEBUG: D:\QC\QC_BSA\20250214_BSA-QC_002.raw
08 Aug 2025 20:11:02,132 DEBUG: D:\QC\QC_BSA\20250606_BSA-QC-02.raw
08 Aug 2025 20:11:02,132 DEBUG: D:\QC\QC_BSA\20250520_QC_BSA-001.raw
08 Aug 2025 20:11:02,132 DEBUG: D:\QC\QC_BSA\20250520_QC_BSA-002.raw
08 Aug 2025 20:11:02,132 DEBUG: D:\QC\QC_BSA\20250214_BSA-QC_001.raw
08 Aug 2025 20:11:02,132 DEBUG: D:\QC\QC_BSA\20250805-QC-BSA-2.raw
08 Aug 2025 20:11:02,133 DEBUG: D:\QC\QC_BSA\20250624-QC-BSA-2.raw
08 Aug 2025 20:11:02,133 DEBUG: D:\QC\QC_BSA\20241021-Blank_08.raw
08 Aug 2025 20:11:02,133 DEBUG: D:\QC\QC_BSA\20250603_BSA-QC-03.raw
08 Aug 2025 20:11:02,133 DEBUG: D:\QC\QC_BSA\20241021_BSA-QC-02.raw
08 Aug 2025 20:11:02,133 DEBUG: D:\QC\QC_BSA\20241021_BSA-QC-04.raw
08 Aug 2025 20:11:02,133 DEBUG: D:\QC\QC_BSA\20250410_QC_BSA-002_20250414080941.raw
08 Aug 2025 20:11:02,133 DEBUG: D:\QC\QC_BSA\20250606_BSA-QC-01.raw
08 Aug 2025 20:11:02,133 DEBUG: D:\QC\QC_BSA\20250214_BSA-QC_003.raw
08 Aug 2025 20:11:02,133 DEBUG: D:\QC\QC_BSA\20250603_BSA-QC-02.raw
08 Aug 2025 20:11:02,133 DEBUG: D:\QC\QC_BSA\20250805-QC-BSA-1.raw
08 Aug 2025 20:11:02,133 DEBUG: D:\QC\QC_BSA\20250624-QC-BSA-2_20250625111517.raw
08 Aug 2025 20:11:02,133 DEBUG: D:\QC\QC_BSA\20241021_BSA-QC-03.raw
08 Aug 2025 20:11:05,663 INFO : 98% Done
08 Aug 2025 20:11:05,664 INFO : Done updating previously imported sample file data.
08 Aug 2025 20:11:06,338 INFO : All the related sampleFiles for /data/labkey/files/NCSU - METRIC/METRIC Internal/METRIC Proteomics QC/Eclipse_PSB/@files/METRIC_Eclipse_PSB_All_QCs_2025-08-08_03-05-43.sky.zip have been updated with newer data.
08 Aug 2025 20:11:06,338 INFO : Deleting /data/labkey/files/NCSU - METRIC/METRIC Internal/METRIC Proteomics QC/Eclipse_PSB/@files/METRIC_Eclipse_PSB_All_QCs_2025-08-08_03-05-43.sky.zip
08 Aug 2025 20:11:06,338 INFO : Deleting directory /data/labkey/files/NCSU - METRIC/METRIC Internal/METRIC Proteomics QC/Eclipse_PSB/@files/METRIC_Eclipse_PSB_All_QCs_2025-08-08_03-05-43
08 Aug 2025 20:11:06,338 INFO : Creating and populating temp tables for Proportion values
08 Aug 2025 20:11:06,342 INFO : Setting PrecursorModifiedAreaProportion values on precursorchrominfo
08 Aug 2025 20:11:06,348 INFO : Setting ModifiedAreaProportion values on generalmoleculechrominfo
08 Aug 2025 20:11:06,352 INFO : Cleaning up temp tables
08 Aug 2025 20:11:06,652 INFO : Deleted temp copy of SKYD file
08 Aug 2025 20:11:06,652 INFO : Completed import of Skyline document from METRIC_Eclipse_PSB_All_QCs_2025-08-08_23-10-58.sky.zip
08 Aug 2025 20:11:06,654 INFO : 100% Done
08 Aug 2025 20:11:06,889 INFO : Successfully completed task 'org.labkey.targetedms.pipeline.TargetedMSImportTask'