07 Aug 2025 03:49:22,655 DEBUG: Resetting Job ID: 0f8bcaf1-55aa-103e-8e6e-1cc91aa98000
07 Aug 2025 03:49:22,674 INFO : Starting to run task 'org.labkey.targetedms.pipeline.TargetedMSImportTask' at location 'webserver-high-priority'
07 Aug 2025 03:49:22,675 INFO : Starting to import Skyline document from METRIC_Eclipse_PSB_All_QCs_2025-08-07_06-49-19.sky.zip
07 Aug 2025 03:49:22,685 INFO : Expanding METRIC_Eclipse_PSB_All_QCs.skyd
07 Aug 2025 03:49:23,061 INFO : Expanding METRIC_Eclipse_PSB_All_QCs.sky
07 Aug 2025 03:49:23,202 INFO : Reading Skyline file, METRIC_Eclipse_PSB_All_QCs.sky, to determine if the TransitionChromInfos in the document should be stored...
07 Aug 2025 03:49:23,311 INFO : TransitionChromInfo counts or precursor counts are within the allowed limits. TransitionChromInfos will be stored
07 Aug 2025 03:49:23,311 WARN : The version of this Skyline document is 25.1. This is newer than the highest supported version 23.1
07 Aug 2025 03:49:23,313 INFO : 2% Done
07 Aug 2025 03:49:23,313 INFO : Copying SKYD to temp directory for import purposes
07 Aug 2025 03:49:26,783 INFO : Copying complete
07 Aug 2025 03:49:26,783 DEBUG: Starting to load chromatogram headers
07 Aug 2025 03:49:26,784 DEBUG: Done loading chromatogram headers
07 Aug 2025 03:49:26,993 INFO : Inserting gi|162648|gb|AAA51411.1|
07 Aug 2025 03:49:26,997 INFO : 10% Done
07 Aug 2025 03:49:27,026 INFO : 19% Done
07 Aug 2025 03:49:27,062 INFO : 26% Done
07 Aug 2025 03:49:27,092 INFO : 37% Done
07 Aug 2025 03:49:27,133 INFO : 48% Done
07 Aug 2025 03:49:27,174 INFO : 60% Done
07 Aug 2025 03:49:27,215 DEBUG: Total peptides inserted: 6
07 Aug 2025 03:49:27,215 INFO : Done parsing Skyline document.
07 Aug 2025 03:49:27,272 INFO : No group comparisons found.
07 Aug 2025 03:49:27,272 INFO : Calculating calibration curves
07 Aug 2025 03:49:27,272 DEBUG: Calculating calibration curve for gi|162648|gb|AAA51411.1|, 1 of 1
07 Aug 2025 03:49:27,345 INFO : 68% Done
07 Aug 2025 03:49:27,347 INFO : Done calculating calibration curves.
07 Aug 2025 03:49:27,347 INFO : Updating previously imported data for 34 old sample files.
07 Aug 2025 03:49:27,347 DEBUG: Found data for the following old sample files in the QC folder:
07 Aug 2025 03:49:27,347 DEBUG: D:\QC\QC_BSA\20250603_BSA-QC-01.raw
07 Aug 2025 03:49:27,347 DEBUG: D:\QC\QC_BSA\20250214_BSA-QC_004.raw
07 Aug 2025 03:49:27,347 DEBUG: D:\QC\QC_BSA\20250606_BSA-QC-04.raw
07 Aug 2025 03:49:27,347 DEBUG: D:\QC\QC_BSA\20220410_QC_BSA-001.raw
07 Aug 2025 03:49:27,347 DEBUG: D:\QC\QC_BSA\20240126_QC_BSA-003_20250524065009.raw
07 Aug 2025 03:49:27,347 DEBUG: D:\QC\QC_BSA\20250214_BSA-QC_005.raw
07 Aug 2025 03:49:27,347 DEBUG: D:\QC\QC_BSA\20241021-Kritika-AmylinLiverCD11c-DDA_004.raw
07 Aug 2025 03:49:27,347 DEBUG: D:\QC\QC_BSA\20250606_BSA-QC-03.raw
07 Aug 2025 03:49:27,347 DEBUG: D:\QC\QC_BSA\20250625-QC-BSA-1.raw
07 Aug 2025 03:49:27,348 DEBUG: D:\QC\QC_BSA\20250624-QC-BSA-1.raw
07 Aug 2025 03:49:27,348 DEBUG: D:\QC\QC_BSA\20241021_BSA-QC-01.raw
07 Aug 2025 03:49:27,348 DEBUG: D:\QC\QC_BSA\20250214_BSA-QC_006.raw
07 Aug 2025 03:49:27,348 DEBUG: D:\QC\QC_BSA\20250410_QC_BSA-002.raw
07 Aug 2025 03:49:27,348 DEBUG: D:\QC\QC_BSA\20241021_BSA-QC-05.raw
07 Aug 2025 03:49:27,348 DEBUG: D:\QC\QC_BSA\20241021_BSA-QC-01_20241021152050.raw
07 Aug 2025 03:49:27,348 DEBUG: D:\QC\QC_BSA\20240126_QC_BSA-003_20250523094527.raw
07 Aug 2025 03:49:27,348 DEBUG: D:\QC\QC_BSA\20250520_QC_BSA-001_20250520195858.raw
07 Aug 2025 03:49:27,348 DEBUG: D:\QC\QC_BSA\20250214_BSA-QC_002.raw
07 Aug 2025 03:49:27,348 DEBUG: D:\QC\QC_BSA\20250606_BSA-QC-02.raw
07 Aug 2025 03:49:27,348 DEBUG: D:\QC\QC_BSA\20250520_QC_BSA-001.raw
07 Aug 2025 03:49:27,348 DEBUG: D:\QC\QC_BSA\20250520_QC_BSA-002.raw
07 Aug 2025 03:49:27,348 DEBUG: D:\QC\QC_BSA\20250214_BSA-QC_001.raw
07 Aug 2025 03:49:27,348 DEBUG: D:\QC\QC_BSA\20250624-QC-BSA-2.raw
07 Aug 2025 03:49:27,348 DEBUG: D:\QC\QC_BSA\20241021-Blank_08.raw
07 Aug 2025 03:49:27,348 DEBUG: D:\QC\QC_BSA\20250603_BSA-QC-03.raw
07 Aug 2025 03:49:27,348 DEBUG: D:\QC\QC_BSA\20241021_BSA-QC-02.raw
07 Aug 2025 03:49:27,348 DEBUG: D:\QC\QC_BSA\20241021_BSA-QC-04.raw
07 Aug 2025 03:49:27,348 DEBUG: D:\QC\QC_BSA\20250410_QC_BSA-002_20250414080941.raw
07 Aug 2025 03:49:27,348 DEBUG: D:\QC\QC_BSA\20250606_BSA-QC-01.raw
07 Aug 2025 03:49:27,348 DEBUG: D:\QC\QC_BSA\20250214_BSA-QC_003.raw
07 Aug 2025 03:49:27,348 DEBUG: D:\QC\QC_BSA\20250603_BSA-QC-02.raw
07 Aug 2025 03:49:27,348 DEBUG: D:\QC\QC_BSA\20250805-QC-BSA-1.raw
07 Aug 2025 03:49:27,348 DEBUG: D:\QC\QC_BSA\20250624-QC-BSA-2_20250625111517.raw
07 Aug 2025 03:49:27,348 DEBUG: D:\QC\QC_BSA\20241021_BSA-QC-03.raw
07 Aug 2025 03:49:30,887 INFO : 98% Done
07 Aug 2025 03:49:30,887 INFO : Done updating previously imported sample file data.
07 Aug 2025 03:49:31,502 INFO : All the related sampleFiles for /data/labkey/files/NCSU - METRIC/METRIC Internal/METRIC Proteomics QC/Eclipse_PSB/@files/METRIC_Eclipse_PSB_All_QCs_2025-08-06_13-38-50.sky.zip have been updated with newer data.
07 Aug 2025 03:49:31,502 INFO : Deleting /data/labkey/files/NCSU - METRIC/METRIC Internal/METRIC Proteomics QC/Eclipse_PSB/@files/METRIC_Eclipse_PSB_All_QCs_2025-08-06_13-38-50.sky.zip
07 Aug 2025 03:49:31,502 INFO : Deleting directory /data/labkey/files/NCSU - METRIC/METRIC Internal/METRIC Proteomics QC/Eclipse_PSB/@files/METRIC_Eclipse_PSB_All_QCs_2025-08-06_13-38-50
07 Aug 2025 03:49:31,502 INFO : Creating and populating temp tables for Proportion values
07 Aug 2025 03:49:31,507 INFO : Setting PrecursorModifiedAreaProportion values on precursorchrominfo
07 Aug 2025 03:49:31,512 INFO : Setting ModifiedAreaProportion values on generalmoleculechrominfo
07 Aug 2025 03:49:31,517 INFO : Cleaning up temp tables
07 Aug 2025 03:49:31,777 INFO : Deleted temp copy of SKYD file
07 Aug 2025 03:49:31,778 INFO : Completed import of Skyline document from METRIC_Eclipse_PSB_All_QCs_2025-08-07_06-49-19.sky.zip
07 Aug 2025 03:49:31,780 INFO : 100% Done
07 Aug 2025 03:49:32,016 INFO : Successfully completed task 'org.labkey.targetedms.pipeline.TargetedMSImportTask'