24 Jul 2025 11:39:05,675 DEBUG: Resetting Job ID: 249f1896-4aeb-103e-b83a-1cc91aa98100
24 Jul 2025 11:39:05,691 INFO : Starting to run task 'org.labkey.targetedms.pipeline.TargetedMSImportTask' at location 'webserver-high-priority'
24 Jul 2025 11:39:05,692 INFO : Starting to import Skyline document from METRIC_Eclipse_PSB_All_QCs_2025-07-24_14-39-02.sky.zip
24 Jul 2025 11:39:05,701 INFO : Expanding METRIC_Eclipse_PSB_All_QCs.skyd
24 Jul 2025 11:39:05,944 INFO : Expanding METRIC_Eclipse_PSB_All_QCs.sky
24 Jul 2025 11:39:05,948 INFO : Reading Skyline file, METRIC_Eclipse_PSB_All_QCs.sky, to determine if the TransitionChromInfos in the document should be stored...
24 Jul 2025 11:39:05,952 INFO : TransitionChromInfo counts or precursor counts are within the allowed limits. TransitionChromInfos will be stored
24 Jul 2025 11:39:05,952 WARN : The version of this Skyline document is 25.1. This is newer than the highest supported version 23.1
24 Jul 2025 11:39:05,954 INFO : 2% Done
24 Jul 2025 11:39:05,955 INFO : Copying SKYD to temp directory for import purposes
24 Jul 2025 11:39:06,032 INFO : Copying complete
24 Jul 2025 11:39:06,033 DEBUG: Starting to load chromatogram headers
24 Jul 2025 11:39:06,033 DEBUG: Done loading chromatogram headers
24 Jul 2025 11:39:07,495 INFO : Inserting gi|162648|gb|AAA51411.1|
24 Jul 2025 11:39:07,499 INFO : 10% Done
24 Jul 2025 11:39:07,528 INFO : 19% Done
24 Jul 2025 11:39:07,560 INFO : 26% Done
24 Jul 2025 11:39:07,587 INFO : 37% Done
24 Jul 2025 11:39:07,623 INFO : 49% Done
24 Jul 2025 11:39:07,660 INFO : 60% Done
24 Jul 2025 11:39:07,698 DEBUG: Total peptides inserted: 6
24 Jul 2025 11:39:07,698 INFO : Done parsing Skyline document.
24 Jul 2025 11:39:07,751 INFO : No group comparisons found.
24 Jul 2025 11:39:07,751 INFO : Calculating calibration curves
24 Jul 2025 11:39:07,751 DEBUG: Calculating calibration curve for gi|162648|gb|AAA51411.1|, 1 of 1
24 Jul 2025 11:39:07,813 INFO : 68% Done
24 Jul 2025 11:39:07,814 INFO : Done calculating calibration curves.
24 Jul 2025 11:39:07,814 INFO : Updating previously imported data for 33 old sample files.
24 Jul 2025 11:39:07,814 DEBUG: Found data for the following old sample files in the QC folder:
24 Jul 2025 11:39:07,815 DEBUG: D:\QC\QC_BSA\20250603_BSA-QC-01.raw
24 Jul 2025 11:39:07,815 DEBUG: D:\QC\QC_BSA\20250214_BSA-QC_004.raw
24 Jul 2025 11:39:07,815 DEBUG: D:\QC\QC_BSA\20250606_BSA-QC-04.raw
24 Jul 2025 11:39:07,815 DEBUG: D:\QC\QC_BSA\20220410_QC_BSA-001.raw
24 Jul 2025 11:39:07,815 DEBUG: D:\QC\QC_BSA\20240126_QC_BSA-003_20250524065009.raw
24 Jul 2025 11:39:07,815 DEBUG: D:\QC\QC_BSA\20250214_BSA-QC_005.raw
24 Jul 2025 11:39:07,815 DEBUG: D:\QC\QC_BSA\20241021-Kritika-AmylinLiverCD11c-DDA_004.raw
24 Jul 2025 11:39:07,815 DEBUG: D:\QC\QC_BSA\20250606_BSA-QC-03.raw
24 Jul 2025 11:39:07,815 DEBUG: D:\QC\QC_BSA\20250625-QC-BSA-1.raw
24 Jul 2025 11:39:07,815 DEBUG: D:\QC\QC_BSA\20250624-QC-BSA-1.raw
24 Jul 2025 11:39:07,815 DEBUG: D:\QC\QC_BSA\20241021_BSA-QC-01.raw
24 Jul 2025 11:39:07,815 DEBUG: D:\QC\QC_BSA\20250214_BSA-QC_006.raw
24 Jul 2025 11:39:07,815 DEBUG: D:\QC\QC_BSA\20250410_QC_BSA-002.raw
24 Jul 2025 11:39:07,815 DEBUG: D:\QC\QC_BSA\20241021_BSA-QC-05.raw
24 Jul 2025 11:39:07,815 DEBUG: D:\QC\QC_BSA\20241021_BSA-QC-01_20241021152050.raw
24 Jul 2025 11:39:07,815 DEBUG: D:\QC\QC_BSA\20240126_QC_BSA-003_20250523094527.raw
24 Jul 2025 11:39:07,815 DEBUG: D:\QC\QC_BSA\20250520_QC_BSA-001_20250520195858.raw
24 Jul 2025 11:39:07,815 DEBUG: D:\QC\QC_BSA\20250214_BSA-QC_002.raw
24 Jul 2025 11:39:07,815 DEBUG: D:\QC\QC_BSA\20250606_BSA-QC-02.raw
24 Jul 2025 11:39:07,815 DEBUG: D:\QC\QC_BSA\20250520_QC_BSA-001.raw
24 Jul 2025 11:39:07,815 DEBUG: D:\QC\QC_BSA\20250520_QC_BSA-002.raw
24 Jul 2025 11:39:07,815 DEBUG: D:\QC\QC_BSA\20250214_BSA-QC_001.raw
24 Jul 2025 11:39:07,815 DEBUG: D:\QC\QC_BSA\20250624-QC-BSA-2.raw
24 Jul 2025 11:39:07,815 DEBUG: D:\QC\QC_BSA\20241021-Blank_08.raw
24 Jul 2025 11:39:07,815 DEBUG: D:\QC\QC_BSA\20250603_BSA-QC-03.raw
24 Jul 2025 11:39:07,815 DEBUG: D:\QC\QC_BSA\20241021_BSA-QC-02.raw
24 Jul 2025 11:39:07,815 DEBUG: D:\QC\QC_BSA\20241021_BSA-QC-04.raw
24 Jul 2025 11:39:07,815 DEBUG: D:\QC\QC_BSA\20250410_QC_BSA-002_20250414080941.raw
24 Jul 2025 11:39:07,815 DEBUG: D:\QC\QC_BSA\20250606_BSA-QC-01.raw
24 Jul 2025 11:39:07,815 DEBUG: D:\QC\QC_BSA\20250214_BSA-QC_003.raw
24 Jul 2025 11:39:07,815 DEBUG: D:\QC\QC_BSA\20250603_BSA-QC-02.raw
24 Jul 2025 11:39:07,816 DEBUG: D:\QC\QC_BSA\20250624-QC-BSA-2_20250625111517.raw
24 Jul 2025 11:39:07,816 DEBUG: D:\QC\QC_BSA\20241021_BSA-QC-03.raw
24 Jul 2025 11:39:11,670 INFO : 98% Done
24 Jul 2025 11:39:11,671 INFO : Done updating previously imported sample file data.
24 Jul 2025 11:39:12,267 INFO : All the related sampleFiles for /data/labkey/files/NCSU - METRIC/METRIC Internal/METRIC Proteomics QC/Eclipse_PSB/@files/METRIC_Eclipse_PSB_All_QCs_2025-07-24_14-37-09.sky.zip have been updated with newer data.
24 Jul 2025 11:39:12,267 INFO : Deleting /data/labkey/files/NCSU - METRIC/METRIC Internal/METRIC Proteomics QC/Eclipse_PSB/@files/METRIC_Eclipse_PSB_All_QCs_2025-07-24_14-37-09.sky.zip
24 Jul 2025 11:39:12,267 INFO : Deleting directory /data/labkey/files/NCSU - METRIC/METRIC Internal/METRIC Proteomics QC/Eclipse_PSB/@files/METRIC_Eclipse_PSB_All_QCs_2025-07-24_14-37-09
24 Jul 2025 11:39:12,268 INFO : Creating and populating temp tables for Proportion values
24 Jul 2025 11:39:12,272 INFO : Setting PrecursorModifiedAreaProportion values on precursorchrominfo
24 Jul 2025 11:39:12,278 INFO : Setting ModifiedAreaProportion values on generalmoleculechrominfo
24 Jul 2025 11:39:12,282 INFO : Cleaning up temp tables
24 Jul 2025 11:39:12,291 INFO : Deleted temp copy of SKYD file
24 Jul 2025 11:39:12,291 INFO : Completed import of Skyline document from METRIC_Eclipse_PSB_All_QCs_2025-07-24_14-39-02.sky.zip
24 Jul 2025 11:39:12,293 INFO : 100% Done
24 Jul 2025 11:39:12,553 INFO : Successfully completed task 'org.labkey.targetedms.pipeline.TargetedMSImportTask'