10 Jul 2025 09:00:44,715 DEBUG: Resetting Job ID: e3ae5b5e-3fd4-103e-a466-1cc91aa91d00
10 Jul 2025 09:00:44,740 INFO : Starting to run task 'org.labkey.targetedms.pipeline.TargetedMSImportTask' at location 'webserver-high-priority'
10 Jul 2025 09:00:44,742 INFO : Starting to import Skyline document from METRIC_Eclipse_PSB_All_QCs_2025-07-10_12-00-43.sky.zip
10 Jul 2025 09:00:44,742 INFO : Expanding METRIC_Eclipse_PSB_All_QCs.skyd
10 Jul 2025 09:00:44,956 INFO : Expanding METRIC_Eclipse_PSB_All_QCs.sky
10 Jul 2025 09:00:44,960 INFO : Reading Skyline file, METRIC_Eclipse_PSB_All_QCs.sky, to determine if the TransitionChromInfos in the document should be stored...
10 Jul 2025 09:00:44,965 INFO : TransitionChromInfo counts or precursor counts are within the allowed limits. TransitionChromInfos will be stored
10 Jul 2025 09:00:44,965 WARN : The version of this Skyline document is 25.1. This is newer than the highest supported version 23.1
10 Jul 2025 09:00:44,969 INFO : 2% Done
10 Jul 2025 09:00:44,969 INFO : Copying SKYD to temp directory for import purposes
10 Jul 2025 09:00:45,027 INFO : Copying complete
10 Jul 2025 09:00:45,027 DEBUG: Starting to load chromatogram headers
10 Jul 2025 09:00:45,028 DEBUG: Done loading chromatogram headers
10 Jul 2025 09:00:45,282 INFO : Inserting gi|162648|gb|AAA51411.1|
10 Jul 2025 09:00:45,288 INFO : 10% Done
10 Jul 2025 09:00:45,320 INFO : 19% Done
10 Jul 2025 09:00:45,357 INFO : 26% Done
10 Jul 2025 09:00:45,388 INFO : 37% Done
10 Jul 2025 09:00:45,434 INFO : 49% Done
10 Jul 2025 09:00:45,483 INFO : 60% Done
10 Jul 2025 09:00:45,525 DEBUG: Total peptides inserted: 6
10 Jul 2025 09:00:45,526 INFO : Done parsing Skyline document.
10 Jul 2025 09:00:45,603 INFO : No group comparisons found.
10 Jul 2025 09:00:45,603 INFO : Calculating calibration curves
10 Jul 2025 09:00:45,603 DEBUG: Calculating calibration curve for gi|162648|gb|AAA51411.1|, 1 of 1
10 Jul 2025 09:00:45,683 INFO : 68% Done
10 Jul 2025 09:00:45,684 INFO : Done calculating calibration curves.
10 Jul 2025 09:00:45,685 INFO : Updating previously imported data for 33 old sample files.
10 Jul 2025 09:00:45,685 DEBUG: Found data for the following old sample files in the QC folder:
10 Jul 2025 09:00:45,685 DEBUG: D:\QC\QC_BSA\20250603_BSA-QC-01.raw
10 Jul 2025 09:00:45,685 DEBUG: D:\QC\QC_BSA\20250214_BSA-QC_004.raw
10 Jul 2025 09:00:45,685 DEBUG: D:\QC\QC_BSA\20250606_BSA-QC-04.raw
10 Jul 2025 09:00:45,685 DEBUG: D:\QC\QC_BSA\20220410_QC_BSA-001.raw
10 Jul 2025 09:00:45,685 DEBUG: D:\QC\QC_BSA\20240126_QC_BSA-003_20250524065009.raw
10 Jul 2025 09:00:45,685 DEBUG: D:\QC\QC_BSA\20250214_BSA-QC_005.raw
10 Jul 2025 09:00:45,685 DEBUG: D:\QC\QC_BSA\20241021-Kritika-AmylinLiverCD11c-DDA_004.raw
10 Jul 2025 09:00:45,685 DEBUG: D:\QC\QC_BSA\20250606_BSA-QC-03.raw
10 Jul 2025 09:00:45,685 DEBUG: D:\QC\QC_BSA\20250625-QC-BSA-1.raw
10 Jul 2025 09:00:45,685 DEBUG: D:\QC\QC_BSA\20250624-QC-BSA-1.raw
10 Jul 2025 09:00:45,685 DEBUG: D:\QC\QC_BSA\20241021_BSA-QC-01.raw
10 Jul 2025 09:00:45,685 DEBUG: D:\QC\QC_BSA\20250214_BSA-QC_006.raw
10 Jul 2025 09:00:45,685 DEBUG: D:\QC\QC_BSA\20250410_QC_BSA-002.raw
10 Jul 2025 09:00:45,685 DEBUG: D:\QC\QC_BSA\20241021_BSA-QC-05.raw
10 Jul 2025 09:00:45,685 DEBUG: D:\QC\QC_BSA\20241021_BSA-QC-01_20241021152050.raw
10 Jul 2025 09:00:45,685 DEBUG: D:\QC\QC_BSA\20240126_QC_BSA-003_20250523094527.raw
10 Jul 2025 09:00:45,685 DEBUG: D:\QC\QC_BSA\20250520_QC_BSA-001_20250520195858.raw
10 Jul 2025 09:00:45,685 DEBUG: D:\QC\QC_BSA\20250214_BSA-QC_002.raw
10 Jul 2025 09:00:45,685 DEBUG: D:\QC\QC_BSA\20250606_BSA-QC-02.raw
10 Jul 2025 09:00:45,685 DEBUG: D:\QC\QC_BSA\20250520_QC_BSA-001.raw
10 Jul 2025 09:00:45,685 DEBUG: D:\QC\QC_BSA\20250520_QC_BSA-002.raw
10 Jul 2025 09:00:45,685 DEBUG: D:\QC\QC_BSA\20250214_BSA-QC_001.raw
10 Jul 2025 09:00:45,685 DEBUG: D:\QC\QC_BSA\20250624-QC-BSA-2.raw
10 Jul 2025 09:00:45,685 DEBUG: D:\QC\QC_BSA\20241021-Blank_08.raw
10 Jul 2025 09:00:45,686 DEBUG: D:\QC\QC_BSA\20250603_BSA-QC-03.raw
10 Jul 2025 09:00:45,686 DEBUG: D:\QC\QC_BSA\20241021_BSA-QC-02.raw
10 Jul 2025 09:00:45,686 DEBUG: D:\QC\QC_BSA\20241021_BSA-QC-04.raw
10 Jul 2025 09:00:45,686 DEBUG: D:\QC\QC_BSA\20250410_QC_BSA-002_20250414080941.raw
10 Jul 2025 09:00:45,686 DEBUG: D:\QC\QC_BSA\20250606_BSA-QC-01.raw
10 Jul 2025 09:00:45,686 DEBUG: D:\QC\QC_BSA\20250214_BSA-QC_003.raw
10 Jul 2025 09:00:45,686 DEBUG: D:\QC\QC_BSA\20250603_BSA-QC-02.raw
10 Jul 2025 09:00:45,686 DEBUG: D:\QC\QC_BSA\20250624-QC-BSA-2_20250625111517.raw
10 Jul 2025 09:00:45,686 DEBUG: D:\QC\QC_BSA\20241021_BSA-QC-03.raw
10 Jul 2025 09:00:50,304 INFO : 98% Done
10 Jul 2025 09:00:50,304 INFO : Done updating previously imported sample file data.
10 Jul 2025 09:00:51,280 INFO : All the related sampleFiles for /data/labkey/files/NCSU - METRIC/METRIC Internal/METRIC Proteomics QC/Eclipse_PSB/@files/METRIC_Eclipse_PSB_All_QCs_2025-07-10_11-58-47.sky.zip have been updated with newer data.
10 Jul 2025 09:00:51,280 INFO : Deleting /data/labkey/files/NCSU - METRIC/METRIC Internal/METRIC Proteomics QC/Eclipse_PSB/@files/METRIC_Eclipse_PSB_All_QCs_2025-07-10_11-58-47.sky.zip
10 Jul 2025 09:00:51,280 INFO : Deleting directory /data/labkey/files/NCSU - METRIC/METRIC Internal/METRIC Proteomics QC/Eclipse_PSB/@files/METRIC_Eclipse_PSB_All_QCs_2025-07-10_11-58-47
10 Jul 2025 09:00:51,280 INFO : Creating and populating temp tables for Proportion values
10 Jul 2025 09:00:51,284 INFO : Setting PrecursorModifiedAreaProportion values on precursorchrominfo
10 Jul 2025 09:00:51,291 INFO : Setting ModifiedAreaProportion values on generalmoleculechrominfo
10 Jul 2025 09:00:51,295 INFO : Cleaning up temp tables
10 Jul 2025 09:00:51,567 INFO : Deleted temp copy of SKYD file
10 Jul 2025 09:00:51,567 INFO : Completed import of Skyline document from METRIC_Eclipse_PSB_All_QCs_2025-07-10_12-00-43.sky.zip
10 Jul 2025 09:00:51,570 INFO : 100% Done
10 Jul 2025 09:00:51,854 INFO : Successfully completed task 'org.labkey.targetedms.pipeline.TargetedMSImportTask'