10 Jul 2025 08:58:48,980 DEBUG: Resetting Job ID: 884d4ade-3fd4-103e-a466-1cc91aa91d00
10 Jul 2025 08:58:49,005 INFO : Starting to run task 'org.labkey.targetedms.pipeline.TargetedMSImportTask' at location 'webserver-high-priority'
10 Jul 2025 08:58:49,007 INFO : Starting to import Skyline document from METRIC_Eclipse_PSB_All_QCs_2025-07-10_11-58-47.sky.zip
10 Jul 2025 08:58:49,007 INFO : Expanding METRIC_Eclipse_PSB_All_QCs.skyd
10 Jul 2025 08:58:49,218 INFO : Expanding METRIC_Eclipse_PSB_All_QCs.sky
10 Jul 2025 08:58:49,222 INFO : Reading Skyline file, METRIC_Eclipse_PSB_All_QCs.sky, to determine if the TransitionChromInfos in the document should be stored...
10 Jul 2025 08:58:49,227 INFO : TransitionChromInfo counts or precursor counts are within the allowed limits. TransitionChromInfos will be stored
10 Jul 2025 08:58:49,227 WARN : The version of this Skyline document is 25.1. This is newer than the highest supported version 23.1
10 Jul 2025 08:58:49,230 INFO : 2% Done
10 Jul 2025 08:58:49,230 INFO : Copying SKYD to temp directory for import purposes
10 Jul 2025 08:58:49,291 INFO : Copying complete
10 Jul 2025 08:58:49,291 DEBUG: Starting to load chromatogram headers
10 Jul 2025 08:58:49,291 DEBUG: Done loading chromatogram headers
10 Jul 2025 08:58:49,649 INFO : Inserting gi|162648|gb|AAA51411.1|
10 Jul 2025 08:58:49,658 INFO : 10% Done
10 Jul 2025 08:58:49,694 INFO : 19% Done
10 Jul 2025 08:58:49,740 INFO : 26% Done
10 Jul 2025 08:58:49,785 INFO : 37% Done
10 Jul 2025 08:58:49,840 INFO : 49% Done
10 Jul 2025 08:58:49,901 INFO : 60% Done
10 Jul 2025 08:58:49,947 DEBUG: Total peptides inserted: 6
10 Jul 2025 08:58:49,947 INFO : Done parsing Skyline document.
10 Jul 2025 08:58:50,042 INFO : No group comparisons found.
10 Jul 2025 08:58:50,043 INFO : Calculating calibration curves
10 Jul 2025 08:58:50,043 DEBUG: Calculating calibration curve for gi|162648|gb|AAA51411.1|, 1 of 1
10 Jul 2025 08:58:50,126 INFO : 68% Done
10 Jul 2025 08:58:50,128 INFO : Done calculating calibration curves.
10 Jul 2025 08:58:50,129 INFO : Updating previously imported data for 33 old sample files.
10 Jul 2025 08:58:50,129 DEBUG: Found data for the following old sample files in the QC folder:
10 Jul 2025 08:58:50,129 DEBUG: D:\QC\QC_BSA\20250603_BSA-QC-01.raw
10 Jul 2025 08:58:50,130 DEBUG: D:\QC\QC_BSA\20250214_BSA-QC_004.raw
10 Jul 2025 08:58:50,130 DEBUG: D:\QC\QC_BSA\20250606_BSA-QC-04.raw
10 Jul 2025 08:58:50,130 DEBUG: D:\QC\QC_BSA\20220410_QC_BSA-001.raw
10 Jul 2025 08:58:50,130 DEBUG: D:\QC\QC_BSA\20240126_QC_BSA-003_20250524065009.raw
10 Jul 2025 08:58:50,130 DEBUG: D:\QC\QC_BSA\20250214_BSA-QC_005.raw
10 Jul 2025 08:58:50,130 DEBUG: D:\QC\QC_BSA\20241021-Kritika-AmylinLiverCD11c-DDA_004.raw
10 Jul 2025 08:58:50,130 DEBUG: D:\QC\QC_BSA\20250606_BSA-QC-03.raw
10 Jul 2025 08:58:50,130 DEBUG: D:\QC\QC_BSA\20250625-QC-BSA-1.raw
10 Jul 2025 08:58:50,130 DEBUG: D:\QC\QC_BSA\20250624-QC-BSA-1.raw
10 Jul 2025 08:58:50,130 DEBUG: D:\QC\QC_BSA\20241021_BSA-QC-01.raw
10 Jul 2025 08:58:50,130 DEBUG: D:\QC\QC_BSA\20250214_BSA-QC_006.raw
10 Jul 2025 08:58:50,130 DEBUG: D:\QC\QC_BSA\20250410_QC_BSA-002.raw
10 Jul 2025 08:58:50,130 DEBUG: D:\QC\QC_BSA\20241021_BSA-QC-05.raw
10 Jul 2025 08:58:50,130 DEBUG: D:\QC\QC_BSA\20241021_BSA-QC-01_20241021152050.raw
10 Jul 2025 08:58:50,130 DEBUG: D:\QC\QC_BSA\20240126_QC_BSA-003_20250523094527.raw
10 Jul 2025 08:58:50,130 DEBUG: D:\QC\QC_BSA\20250520_QC_BSA-001_20250520195858.raw
10 Jul 2025 08:58:50,130 DEBUG: D:\QC\QC_BSA\20250214_BSA-QC_002.raw
10 Jul 2025 08:58:50,130 DEBUG: D:\QC\QC_BSA\20250606_BSA-QC-02.raw
10 Jul 2025 08:58:50,130 DEBUG: D:\QC\QC_BSA\20250520_QC_BSA-001.raw
10 Jul 2025 08:58:50,130 DEBUG: D:\QC\QC_BSA\20250520_QC_BSA-002.raw
10 Jul 2025 08:58:50,130 DEBUG: D:\QC\QC_BSA\20250214_BSA-QC_001.raw
10 Jul 2025 08:58:50,130 DEBUG: D:\QC\QC_BSA\20250624-QC-BSA-2.raw
10 Jul 2025 08:58:50,130 DEBUG: D:\QC\QC_BSA\20241021-Blank_08.raw
10 Jul 2025 08:58:50,130 DEBUG: D:\QC\QC_BSA\20250603_BSA-QC-03.raw
10 Jul 2025 08:58:50,131 DEBUG: D:\QC\QC_BSA\20241021_BSA-QC-02.raw
10 Jul 2025 08:58:50,131 DEBUG: D:\QC\QC_BSA\20241021_BSA-QC-04.raw
10 Jul 2025 08:58:50,131 DEBUG: D:\QC\QC_BSA\20250410_QC_BSA-002_20250414080941.raw
10 Jul 2025 08:58:50,131 DEBUG: D:\QC\QC_BSA\20250606_BSA-QC-01.raw
10 Jul 2025 08:58:50,131 DEBUG: D:\QC\QC_BSA\20250214_BSA-QC_003.raw
10 Jul 2025 08:58:50,131 DEBUG: D:\QC\QC_BSA\20250603_BSA-QC-02.raw
10 Jul 2025 08:58:50,131 DEBUG: D:\QC\QC_BSA\20250624-QC-BSA-2_20250625111517.raw
10 Jul 2025 08:58:50,131 DEBUG: D:\QC\QC_BSA\20241021_BSA-QC-03.raw
10 Jul 2025 08:58:55,179 INFO : 98% Done
10 Jul 2025 08:58:55,179 INFO : Done updating previously imported sample file data.
10 Jul 2025 08:58:56,266 INFO : All the related sampleFiles for /data/labkey/files/NCSU - METRIC/METRIC Internal/METRIC Proteomics QC/Eclipse_PSB/@files/METRIC_Eclipse_PSB_All_QCs_2025-06-27_01-27-04.sky.zip have been updated with newer data.
10 Jul 2025 08:58:56,266 INFO : Deleting /data/labkey/files/NCSU - METRIC/METRIC Internal/METRIC Proteomics QC/Eclipse_PSB/@files/METRIC_Eclipse_PSB_All_QCs_2025-06-27_01-27-04.sky.zip
10 Jul 2025 08:58:56,266 INFO : Deleting directory /data/labkey/files/NCSU - METRIC/METRIC Internal/METRIC Proteomics QC/Eclipse_PSB/@files/METRIC_Eclipse_PSB_All_QCs_2025-06-27_01-27-04
10 Jul 2025 08:58:56,266 INFO : Creating and populating temp tables for Proportion values
10 Jul 2025 08:58:56,271 INFO : Setting PrecursorModifiedAreaProportion values on precursorchrominfo
10 Jul 2025 08:58:56,278 INFO : Setting ModifiedAreaProportion values on generalmoleculechrominfo
10 Jul 2025 08:58:56,283 INFO : Cleaning up temp tables
10 Jul 2025 08:58:56,595 INFO : Deleted temp copy of SKYD file
10 Jul 2025 08:58:56,595 INFO : Completed import of Skyline document from METRIC_Eclipse_PSB_All_QCs_2025-07-10_11-58-47.sky.zip
10 Jul 2025 08:58:56,597 INFO : 100% Done
10 Jul 2025 08:58:56,960 INFO : Successfully completed task 'org.labkey.targetedms.pipeline.TargetedMSImportTask'