24 Jun 2025 13:18:06,292 DEBUG: Resetting Job ID: eaa97b13-3365-103e-9c0d-1cc91aa94300
24 Jun 2025 13:18:06,307 INFO : Starting to run task 'org.labkey.targetedms.pipeline.TargetedMSImportTask' at location 'webserver-high-priority'
24 Jun 2025 13:18:06,307 INFO : Starting to import Skyline document from METRIC_Eclipse_PSB_All_QCs_2025-06-24_16-18-03.sky.zip
24 Jun 2025 13:18:06,308 INFO : Expanding METRIC_Eclipse_PSB_All_QCs.skyd
24 Jun 2025 13:18:06,529 INFO : Expanding METRIC_Eclipse_PSB_All_QCs.sky
24 Jun 2025 13:18:06,533 INFO : Reading Skyline file, METRIC_Eclipse_PSB_All_QCs.sky, to determine if the TransitionChromInfos in the document should be stored...
24 Jun 2025 13:18:06,536 INFO : TransitionChromInfo counts or precursor counts are within the allowed limits. TransitionChromInfos will be stored
24 Jun 2025 13:18:06,537 WARN : The version of this Skyline document is 25.1. This is newer than the highest supported version 23.1
24 Jun 2025 13:18:06,538 INFO : 2% Done
24 Jun 2025 13:18:06,538 INFO : Copying SKYD to temp directory for import purposes
24 Jun 2025 13:18:06,592 INFO : Copying complete
24 Jun 2025 13:18:06,592 DEBUG: Starting to load chromatogram headers
24 Jun 2025 13:18:06,592 DEBUG: Done loading chromatogram headers
24 Jun 2025 13:18:06,794 INFO : Inserting gi|162648|gb|AAA51411.1|
24 Jun 2025 13:18:06,799 INFO : 9% Done
24 Jun 2025 13:18:06,826 INFO : 19% Done
24 Jun 2025 13:18:06,856 INFO : 26% Done
24 Jun 2025 13:18:06,883 INFO : 37% Done
24 Jun 2025 13:18:06,916 INFO : 48% Done
24 Jun 2025 13:18:06,951 INFO : 60% Done
24 Jun 2025 13:18:06,986 DEBUG: Total peptides inserted: 6
24 Jun 2025 13:18:06,987 INFO : Done parsing Skyline document.
24 Jun 2025 13:18:07,042 INFO : No group comparisons found.
24 Jun 2025 13:18:07,042 INFO : Calculating calibration curves
24 Jun 2025 13:18:07,043 DEBUG: Calculating calibration curve for gi|162648|gb|AAA51411.1|, 1 of 1
24 Jun 2025 13:18:07,104 INFO : 68% Done
24 Jun 2025 13:18:07,106 INFO : Done calculating calibration curves.
24 Jun 2025 13:18:07,107 INFO : Updating previously imported data for 29 old sample files.
24 Jun 2025 13:18:07,107 DEBUG: Found data for the following old sample files in the QC folder:
24 Jun 2025 13:18:07,107 DEBUG: D:\QC\QC_BSA\20250603_BSA-QC-01.raw
24 Jun 2025 13:18:07,107 DEBUG: D:\QC\QC_BSA\20250214_BSA-QC_004.raw
24 Jun 2025 13:18:07,107 DEBUG: D:\QC\QC_BSA\20250606_BSA-QC-04.raw
24 Jun 2025 13:18:07,107 DEBUG: D:\QC\QC_BSA\20220410_QC_BSA-001.raw
24 Jun 2025 13:18:07,107 DEBUG: D:\QC\QC_BSA\20240126_QC_BSA-003_20250524065009.raw
24 Jun 2025 13:18:07,107 DEBUG: D:\QC\QC_BSA\20250214_BSA-QC_005.raw
24 Jun 2025 13:18:07,107 DEBUG: D:\QC\QC_BSA\20241021-Kritika-AmylinLiverCD11c-DDA_004.raw
24 Jun 2025 13:18:07,107 DEBUG: D:\QC\QC_BSA\20250606_BSA-QC-03.raw
24 Jun 2025 13:18:07,107 DEBUG: D:\QC\QC_BSA\20241021_BSA-QC-01.raw
24 Jun 2025 13:18:07,107 DEBUG: D:\QC\QC_BSA\20250214_BSA-QC_006.raw
24 Jun 2025 13:18:07,107 DEBUG: D:\QC\QC_BSA\20250410_QC_BSA-002.raw
24 Jun 2025 13:18:07,107 DEBUG: D:\QC\QC_BSA\20241021_BSA-QC-05.raw
24 Jun 2025 13:18:07,107 DEBUG: D:\QC\QC_BSA\20241021_BSA-QC-01_20241021152050.raw
24 Jun 2025 13:18:07,107 DEBUG: D:\QC\QC_BSA\20240126_QC_BSA-003_20250523094527.raw
24 Jun 2025 13:18:07,107 DEBUG: D:\QC\QC_BSA\20250520_QC_BSA-001_20250520195858.raw
24 Jun 2025 13:18:07,107 DEBUG: D:\QC\QC_BSA\20250214_BSA-QC_002.raw
24 Jun 2025 13:18:07,107 DEBUG: D:\QC\QC_BSA\20250606_BSA-QC-02.raw
24 Jun 2025 13:18:07,107 DEBUG: D:\QC\QC_BSA\20250520_QC_BSA-001.raw
24 Jun 2025 13:18:07,107 DEBUG: D:\QC\QC_BSA\20250520_QC_BSA-002.raw
24 Jun 2025 13:18:07,107 DEBUG: D:\QC\QC_BSA\20250214_BSA-QC_001.raw
24 Jun 2025 13:18:07,107 DEBUG: D:\QC\QC_BSA\20241021-Blank_08.raw
24 Jun 2025 13:18:07,107 DEBUG: D:\QC\QC_BSA\20250603_BSA-QC-03.raw
24 Jun 2025 13:18:07,107 DEBUG: D:\QC\QC_BSA\20241021_BSA-QC-02.raw
24 Jun 2025 13:18:07,107 DEBUG: D:\QC\QC_BSA\20241021_BSA-QC-04.raw
24 Jun 2025 13:18:07,108 DEBUG: D:\QC\QC_BSA\20250410_QC_BSA-002_20250414080941.raw
24 Jun 2025 13:18:07,108 DEBUG: D:\QC\QC_BSA\20250606_BSA-QC-01.raw
24 Jun 2025 13:18:07,108 DEBUG: D:\QC\QC_BSA\20250214_BSA-QC_003.raw
24 Jun 2025 13:18:07,108 DEBUG: D:\QC\QC_BSA\20250603_BSA-QC-02.raw
24 Jun 2025 13:18:07,108 DEBUG: D:\QC\QC_BSA\20241021_BSA-QC-03.raw
24 Jun 2025 13:18:10,890 INFO : 98% Done
24 Jun 2025 13:18:10,891 INFO : Done updating previously imported sample file data.
24 Jun 2025 13:18:11,514 INFO : All the related sampleFiles for /data/labkey/files/NCSU - METRIC/METRIC Internal/METRIC Proteomics QC/Eclipse_PSB/@files/METRIC_Eclipse_PSB_All_QCs_2025-06-10_11-35-44.sky.zip have been updated with newer data.
24 Jun 2025 13:18:11,514 INFO : Deleting /data/labkey/files/NCSU - METRIC/METRIC Internal/METRIC Proteomics QC/Eclipse_PSB/@files/METRIC_Eclipse_PSB_All_QCs_2025-06-10_11-35-44.sky.zip
24 Jun 2025 13:18:11,514 INFO : Deleting directory /data/labkey/files/NCSU - METRIC/METRIC Internal/METRIC Proteomics QC/Eclipse_PSB/@files/METRIC_Eclipse_PSB_All_QCs_2025-06-10_11-35-44
24 Jun 2025 13:18:11,514 INFO : Creating and populating temp tables for Proportion values
24 Jun 2025 13:18:11,518 INFO : Setting PrecursorModifiedAreaProportion values on precursorchrominfo
24 Jun 2025 13:18:11,523 INFO : Setting ModifiedAreaProportion values on generalmoleculechrominfo
24 Jun 2025 13:18:11,527 INFO : Cleaning up temp tables
24 Jun 2025 13:18:12,107 INFO : Deleted temp copy of SKYD file
24 Jun 2025 13:18:12,107 INFO : Completed import of Skyline document from METRIC_Eclipse_PSB_All_QCs_2025-06-24_16-18-03.sky.zip
24 Jun 2025 13:18:12,109 INFO : 100% Done
24 Jun 2025 13:18:12,316 INFO : Successfully completed task 'org.labkey.targetedms.pipeline.TargetedMSImportTask'