23 Oct 2024 12:47:09,377 DEBUG: Resetting Job ID: fcf28be9-73a4-103d-ba4a-dc22ffcd88aa
23 Oct 2024 12:47:09,399 INFO : Starting to run task 'org.labkey.targetedms.pipeline.TargetedMSImportTask' at location 'webserver-high-priority'
23 Oct 2024 12:47:09,400 INFO : Starting to import Skyline document from METRIC_Eclipse_PSB_All_QCs_2024-10-23_15-47-07.sky.zip
23 Oct 2024 12:47:09,400 INFO : Expanding METRIC_Eclipse_PSB_All_QCs.skyd
23 Oct 2024 12:47:09,609 INFO : Expanding METRIC_Eclipse_PSB_All_QCs.sky
23 Oct 2024 12:47:09,614 INFO : Reading Skyline file, METRIC_Eclipse_PSB_All_QCs.sky, to determine if the TransitionChromInfos in the document should be stored...
23 Oct 2024 12:47:09,620 INFO : TransitionChromInfo counts or precursor counts are within the allowed limits. TransitionChromInfos will be stored
23 Oct 2024 12:47:09,622 INFO : 2% Done
23 Oct 2024 12:47:09,665 DEBUG: Starting to load chromatogram headers
23 Oct 2024 12:47:09,665 DEBUG: Done loading chromatogram headers
23 Oct 2024 12:47:09,908 INFO : Inserting gi|162648|gb|AAA51411.1|
23 Oct 2024 12:47:09,918 INFO : 10% Done
23 Oct 2024 12:47:09,964 INFO : 19% Done
23 Oct 2024 12:47:10,015 INFO : 27% Done
23 Oct 2024 12:47:10,066 INFO : 38% Done
23 Oct 2024 12:47:10,132 INFO : 49% Done
23 Oct 2024 12:47:10,197 INFO : 60% Done
23 Oct 2024 12:47:10,248 DEBUG: Total peptides inserted: 6
23 Oct 2024 12:47:10,248 INFO : Done parsing Skyline document.
23 Oct 2024 12:47:10,316 INFO : No group comparisons found.
23 Oct 2024 12:47:10,316 INFO : Calculating calibration curves
23 Oct 2024 12:47:10,316 DEBUG: Calculating calibration curve for gi|162648|gb|AAA51411.1|, 1 of 1
23 Oct 2024 12:47:10,439 INFO : 68% Done
23 Oct 2024 12:47:10,442 INFO : Done calculating calibration curves.
23 Oct 2024 12:47:10,442 INFO : Updating previously imported data for 31 old sample files.
23 Oct 2024 12:47:10,443 DEBUG: Found data for the following old sample files in the QC folder:
23 Oct 2024 12:47:10,443 DEBUG: D:\QC\QC_BSA\20220209_QC_BSA-002.raw
23 Oct 2024 12:47:10,443 DEBUG: D:\QC\QC_BSA\20240307_QC_BSA-001.raw
23 Oct 2024 12:47:10,443 DEBUG: D:\QC\QC_BSA\20240126_QC_BSA-001.raw
23 Oct 2024 12:47:10,443 DEBUG: D:\QC\QC_BSA\20231116_QC_BSA-001.raw
23 Oct 2024 12:47:10,443 DEBUG: D:\QC\QC_BSA\20231127_blank.raw
23 Oct 2024 12:47:10,443 DEBUG: D:\QC\QC_BSA\20220209_QC_BSA-003.raw
23 Oct 2024 12:47:10,443 DEBUG: D:\QC\QC_BSA\20231127_QC_BSA_001.raw
23 Oct 2024 12:47:10,443 DEBUG: D:\QC\QC_BSA\20240405_QC_BSA-001.raw
23 Oct 2024 12:47:10,443 DEBUG: D:\QC\QC_BSA\20241021-Kritika-AmylinLiverCD11c-DDA_004.raw
23 Oct 2024 12:47:10,443 DEBUG: D:\QC\QC_BSA\20240126_QC_BSA-002.raw
23 Oct 2024 12:47:10,443 DEBUG: D:\QC\QC_BSA\20240126_QC_BSA-003.raw
23 Oct 2024 12:47:10,443 DEBUG: D:\QC\QC_BSA\20231116_QC_BSA-003.raw
23 Oct 2024 12:47:10,443 DEBUG: D:\QC\QC_BSA\20220209_QC_BSA-004.raw
23 Oct 2024 12:47:10,443 DEBUG: D:\QC\QC_BSA\20231116_QC_BSA-002.raw
23 Oct 2024 12:47:10,443 DEBUG: D:\QC\QC_BSA\20241021_BSA-QC-01.raw
23 Oct 2024 12:47:10,443 DEBUG: D:\QC\QC_BSA\20241021_BSA-QC-05.raw
23 Oct 2024 12:47:10,443 DEBUG: D:\QC\QC_BSA\20241021_BSA-QC-01_20241021152050.raw
23 Oct 2024 12:47:10,443 DEBUG: D:\QC\QC_BSA\20240405_QC_BSA-002.raw
23 Oct 2024 12:47:10,443 DEBUG: D:\QC\QC_BSA\20240126_QC_BSA-004.raw
23 Oct 2024 12:47:10,443 DEBUG: D:\QC\QC_BSA\20231127_blank_20231129105817.raw
23 Oct 2024 12:47:10,443 DEBUG: D:\QC\QC_BSA\20231116_QC_BSA-004.raw
23 Oct 2024 12:47:10,443 DEBUG: D:\QC\QC_BSA\20240126_QC_BSA-003_20240130152830.raw
23 Oct 2024 12:47:10,443 DEBUG: D:\QC\QC_BSA\20231127_blank_20231128141043.raw
23 Oct 2024 12:47:10,443 DEBUG: D:\QC\QC_BSA\20241021_BSA-QC-02.raw
23 Oct 2024 12:47:10,443 DEBUG: D:\QC\QC_BSA\20220209_QC_BSA-003_20240214184959.raw
23 Oct 2024 12:47:10,443 DEBUG: D:\QC\QC_BSA\20241021_BSA-QC-04.raw
23 Oct 2024 12:47:10,443 DEBUG: D:\QC\QC_BSA\20231127_QC_BSA_002.raw
23 Oct 2024 12:47:10,443 DEBUG: D:\QC\QC_BSA\20240126_QC_BSA-005.raw
23 Oct 2024 12:47:10,444 DEBUG: D:\QC\QC_BSA\20220209_QC_BSA-001.raw
23 Oct 2024 12:47:10,444 DEBUG: D:\QC\QC_BSA\20240126_QC_BSA-002_20240129194709.raw
23 Oct 2024 12:47:10,444 DEBUG: D:\QC\QC_BSA\20241021_BSA-QC-03.raw
23 Oct 2024 12:47:15,406 INFO : 98% Done
23 Oct 2024 12:47:15,406 INFO : Done updating previously imported sample file data.
23 Oct 2024 12:47:16,248 INFO : All the related sampleFiles for /data/labkey/files/NCSU - METRIC/METRIC Internal/METRIC Proteomics QC/Eclipse_PSB/@files/METRIC_Eclipse_PSB_All_QCs_2024-10-23_15-39-46.sky.zip have been updated with newer data.
23 Oct 2024 12:47:16,248 INFO : Deleting /data/labkey/files/NCSU - METRIC/METRIC Internal/METRIC Proteomics QC/Eclipse_PSB/@files/METRIC_Eclipse_PSB_All_QCs_2024-10-23_15-39-46.sky.zip
23 Oct 2024 12:47:16,248 INFO : Deleting directory /data/labkey/files/NCSU - METRIC/METRIC Internal/METRIC Proteomics QC/Eclipse_PSB/@files/METRIC_Eclipse_PSB_All_QCs_2024-10-23_15-39-46
23 Oct 2024 12:47:16,248 INFO : Creating and populating temp tables for Proportion values
23 Oct 2024 12:47:16,254 INFO : Setting PrecursorModifiedAreaProportion values on precursorchrominfo
23 Oct 2024 12:47:16,262 INFO : Setting ModifiedAreaProportion values on generalmoleculechrominfo
23 Oct 2024 12:47:16,267 INFO : Cleaning up temp tables
23 Oct 2024 12:47:16,569 INFO : Completed import of Skyline document from METRIC_Eclipse_PSB_All_QCs_2024-10-23_15-47-07.sky.zip
23 Oct 2024 12:47:16,571 INFO : 100% Done
23 Oct 2024 12:47:16,597 INFO : Successfully completed task 'org.labkey.targetedms.pipeline.TargetedMSImportTask'