23 Oct 2024 10:39:44,443 DEBUG: Resetting Job ID: afc7998a-7393-103d-ba4a-dc22ffcd88aa
23 Oct 2024 10:39:44,467 INFO : Starting to run task 'org.labkey.targetedms.pipeline.TargetedMSImportTask' at location 'webserver-high-priority'
23 Oct 2024 10:39:44,468 INFO : Starting to import Skyline document from METRIC_Eclipse_PSB_All_QCs_2024-10-23_13-39-42.sky.zip
23 Oct 2024 10:39:44,468 INFO : Expanding METRIC_Eclipse_PSB_All_QCs.skyd
23 Oct 2024 10:39:44,668 INFO : Expanding METRIC_Eclipse_PSB_All_QCs.sky
23 Oct 2024 10:39:44,673 INFO : Reading Skyline file, METRIC_Eclipse_PSB_All_QCs.sky, to determine if the TransitionChromInfos in the document should be stored...
23 Oct 2024 10:39:44,678 INFO : TransitionChromInfo counts or precursor counts are within the allowed limits. TransitionChromInfos will be stored
23 Oct 2024 10:39:44,681 INFO : 2% Done
23 Oct 2024 10:39:44,723 DEBUG: Starting to load chromatogram headers
23 Oct 2024 10:39:44,724 DEBUG: Done loading chromatogram headers
23 Oct 2024 10:39:45,018 INFO : Inserting gi|162648|gb|AAA51411.1|
23 Oct 2024 10:39:45,029 INFO : 10% Done
23 Oct 2024 10:39:45,074 INFO : 19% Done
23 Oct 2024 10:39:45,128 INFO : 26% Done
23 Oct 2024 10:39:45,178 INFO : 38% Done
23 Oct 2024 10:39:45,245 INFO : 49% Done
23 Oct 2024 10:39:45,310 INFO : 60% Done
23 Oct 2024 10:39:45,364 DEBUG: Total peptides inserted: 6
23 Oct 2024 10:39:45,364 INFO : Done parsing Skyline document.
23 Oct 2024 10:39:45,433 INFO : No group comparisons found.
23 Oct 2024 10:39:45,433 INFO : Calculating calibration curves
23 Oct 2024 10:39:45,434 DEBUG: Calculating calibration curve for gi|162648|gb|AAA51411.1|, 1 of 1
23 Oct 2024 10:39:45,558 INFO : 68% Done
23 Oct 2024 10:39:45,561 INFO : Done calculating calibration curves.
23 Oct 2024 10:39:45,562 INFO : Updating previously imported data for 29 old sample files.
23 Oct 2024 10:39:45,562 DEBUG: Found data for the following old sample files in the QC folder:
23 Oct 2024 10:39:45,562 DEBUG: D:\QC\QC_BSA\20220209_QC_BSA-002.raw
23 Oct 2024 10:39:45,562 DEBUG: D:\QC\QC_BSA\20240307_QC_BSA-001.raw
23 Oct 2024 10:39:45,562 DEBUG: D:\QC\QC_BSA\20240126_QC_BSA-001.raw
23 Oct 2024 10:39:45,562 DEBUG: D:\QC\QC_BSA\20231116_QC_BSA-001.raw
23 Oct 2024 10:39:45,562 DEBUG: D:\QC\QC_BSA\20231127_blank.raw
23 Oct 2024 10:39:45,562 DEBUG: D:\QC\QC_BSA\20220209_QC_BSA-003.raw
23 Oct 2024 10:39:45,562 DEBUG: D:\QC\QC_BSA\20231127_QC_BSA_001.raw
23 Oct 2024 10:39:45,562 DEBUG: D:\QC\QC_BSA\20240405_QC_BSA-001.raw
23 Oct 2024 10:39:45,562 DEBUG: D:\QC\QC_BSA\20240126_QC_BSA-002.raw
23 Oct 2024 10:39:45,562 DEBUG: D:\QC\QC_BSA\20240126_QC_BSA-003.raw
23 Oct 2024 10:39:45,562 DEBUG: D:\QC\QC_BSA\20231116_QC_BSA-003.raw
23 Oct 2024 10:39:45,562 DEBUG: D:\QC\QC_BSA\20220209_QC_BSA-004.raw
23 Oct 2024 10:39:45,562 DEBUG: D:\QC\QC_BSA\20231116_QC_BSA-002.raw
23 Oct 2024 10:39:45,562 DEBUG: D:\QC\QC_BSA\20241021_BSA-QC-01.raw
23 Oct 2024 10:39:45,563 DEBUG: D:\QC\QC_BSA\20241021_BSA-QC-01_20241021152050.raw
23 Oct 2024 10:39:45,563 DEBUG: D:\QC\QC_BSA\20240405_QC_BSA-002.raw
23 Oct 2024 10:39:45,563 DEBUG: D:\QC\QC_BSA\20240126_QC_BSA-004.raw
23 Oct 2024 10:39:45,563 DEBUG: D:\QC\QC_BSA\20231127_blank_20231129105817.raw
23 Oct 2024 10:39:45,563 DEBUG: D:\QC\QC_BSA\20231116_QC_BSA-004.raw
23 Oct 2024 10:39:45,563 DEBUG: D:\QC\QC_BSA\20240126_QC_BSA-003_20240130152830.raw
23 Oct 2024 10:39:45,563 DEBUG: D:\QC\QC_BSA\20231127_blank_20231128141043.raw
23 Oct 2024 10:39:45,563 DEBUG: D:\QC\QC_BSA\20241021_BSA-QC-02.raw
23 Oct 2024 10:39:45,563 DEBUG: D:\QC\QC_BSA\20220209_QC_BSA-003_20240214184959.raw
23 Oct 2024 10:39:45,563 DEBUG: D:\QC\QC_BSA\20241021_BSA-QC-04.raw
23 Oct 2024 10:39:45,563 DEBUG: D:\QC\QC_BSA\20231127_QC_BSA_002.raw
23 Oct 2024 10:39:45,563 DEBUG: D:\QC\QC_BSA\20240126_QC_BSA-005.raw
23 Oct 2024 10:39:45,563 DEBUG: D:\QC\QC_BSA\20220209_QC_BSA-001.raw
23 Oct 2024 10:39:45,563 DEBUG: D:\QC\QC_BSA\20240126_QC_BSA-002_20240129194709.raw
23 Oct 2024 10:39:45,564 DEBUG: D:\QC\QC_BSA\20241021_BSA-QC-03.raw
23 Oct 2024 10:39:51,102 INFO : 98% Done
23 Oct 2024 10:39:51,102 INFO : Done updating previously imported sample file data.
23 Oct 2024 10:39:51,975 INFO : All the related sampleFiles for /data/labkey/files/NCSU - METRIC/METRIC Internal/METRIC Proteomics QC/Eclipse_PSB/@files/METRIC_Eclipse_PSB_All_QCs_2024-10-22_23-50-33.sky.zip have been updated with newer data.
23 Oct 2024 10:39:51,975 INFO : Deleting /data/labkey/files/NCSU - METRIC/METRIC Internal/METRIC Proteomics QC/Eclipse_PSB/@files/METRIC_Eclipse_PSB_All_QCs_2024-10-22_23-50-33.sky.zip
23 Oct 2024 10:39:51,975 INFO : Deleting directory /data/labkey/files/NCSU - METRIC/METRIC Internal/METRIC Proteomics QC/Eclipse_PSB/@files/METRIC_Eclipse_PSB_All_QCs_2024-10-22_23-50-33
23 Oct 2024 10:39:51,975 INFO : Creating and populating temp tables for Proportion values
23 Oct 2024 10:39:51,982 INFO : Setting PrecursorModifiedAreaProportion values on precursorchrominfo
23 Oct 2024 10:39:51,989 INFO : Setting ModifiedAreaProportion values on generalmoleculechrominfo
23 Oct 2024 10:39:51,994 INFO : Cleaning up temp tables
23 Oct 2024 10:39:52,313 INFO : Completed import of Skyline document from METRIC_Eclipse_PSB_All_QCs_2024-10-23_13-39-42.sky.zip
23 Oct 2024 10:39:52,316 INFO : 100% Done
23 Oct 2024 10:39:52,345 INFO : Successfully completed task 'org.labkey.targetedms.pipeline.TargetedMSImportTask'