21 Oct 2024 13:36:57,886 DEBUG: Resetting Job ID: dccd5e9b-7219-103d-ba4a-dc22ffcd88aa
21 Oct 2024 13:39:31,596 INFO : Starting to run task 'org.labkey.targetedms.pipeline.TargetedMSImportTask' at location 'webserver-high-priority'
21 Oct 2024 13:39:31,598 INFO : Starting to import Skyline document from METRIC_Eclipse_PSB_All_QCs_2024-10-21_16-36-55.sky.zip
21 Oct 2024 13:39:31,623 INFO : Expanding METRIC_Eclipse_PSB_All_QCs.skyd
21 Oct 2024 13:39:31,809 INFO : Expanding METRIC_Eclipse_PSB_All_QCs.sky
21 Oct 2024 13:39:31,813 INFO : Reading Skyline file, METRIC_Eclipse_PSB_All_QCs.sky, to determine if the TransitionChromInfos in the document should be stored...
21 Oct 2024 13:39:31,820 INFO : TransitionChromInfo counts or precursor counts are within the allowed limits. TransitionChromInfos will be stored
21 Oct 2024 13:39:31,824 INFO : 3% Done
21 Oct 2024 13:39:31,860 DEBUG: Starting to load chromatogram headers
21 Oct 2024 13:39:31,860 DEBUG: Done loading chromatogram headers
21 Oct 2024 13:39:32,093 INFO : Inserting gi|162648|gb|AAA51411.1|
21 Oct 2024 13:39:32,103 INFO : 10% Done
21 Oct 2024 13:39:32,142 INFO : 19% Done
21 Oct 2024 13:39:32,186 INFO : 26% Done
21 Oct 2024 13:39:32,230 INFO : 38% Done
21 Oct 2024 13:39:32,287 INFO : 49% Done
21 Oct 2024 13:39:32,342 INFO : 60% Done
21 Oct 2024 13:39:32,383 DEBUG: Total peptides inserted: 6
21 Oct 2024 13:39:32,383 INFO : Done parsing Skyline document.
21 Oct 2024 13:39:32,452 INFO : No group comparisons found.
21 Oct 2024 13:39:32,452 INFO : Calculating calibration curves
21 Oct 2024 13:39:32,453 DEBUG: Calculating calibration curve for gi|162648|gb|AAA51411.1|, 1 of 1
21 Oct 2024 13:39:32,538 INFO : 68% Done
21 Oct 2024 13:39:32,539 INFO : Done calculating calibration curves.
21 Oct 2024 13:39:32,540 INFO : Updating previously imported data for 25 old sample files.
21 Oct 2024 13:39:32,540 DEBUG: Found data for the following old sample files in the QC folder:
21 Oct 2024 13:39:32,540 DEBUG: D:\QC\QC_BSA\20240405_QC_BSA-002.raw
21 Oct 2024 13:39:32,540 DEBUG: D:\QC\QC_BSA\20220209_QC_BSA-002.raw
21 Oct 2024 13:39:32,540 DEBUG: D:\QC\QC_BSA\20240307_QC_BSA-001.raw
21 Oct 2024 13:39:32,540 DEBUG: D:\QC\QC_BSA\20240126_QC_BSA-004.raw
21 Oct 2024 13:39:32,540 DEBUG: D:\QC\QC_BSA\20231127_blank_20231129105817.raw
21 Oct 2024 13:39:32,540 DEBUG: D:\QC\QC_BSA\20240126_QC_BSA-001.raw
21 Oct 2024 13:39:32,540 DEBUG: D:\QC\QC_BSA\20231116_QC_BSA-004.raw
21 Oct 2024 13:39:32,540 DEBUG: D:\QC\QC_BSA\20231116_QC_BSA-001.raw
21 Oct 2024 13:39:32,540 DEBUG: D:\QC\QC_BSA\20240126_QC_BSA-003_20240130152830.raw
21 Oct 2024 13:39:32,540 DEBUG: D:\QC\QC_BSA\20231127_blank_20231128141043.raw
21 Oct 2024 13:39:32,541 DEBUG: D:\QC\QC_BSA\20231127_blank.raw
21 Oct 2024 13:39:32,541 DEBUG: D:\QC\QC_BSA\20220209_QC_BSA-003.raw
21 Oct 2024 13:39:32,541 DEBUG: D:\QC\QC_BSA\20220209_QC_BSA-003_20240214184959.raw
21 Oct 2024 13:39:32,541 DEBUG: D:\QC\QC_BSA\20231127_QC_BSA_001.raw
21 Oct 2024 13:39:32,541 DEBUG: D:\QC\QC_BSA\20231127_QC_BSA_002.raw
21 Oct 2024 13:39:32,541 DEBUG: D:\QC\QC_BSA\20240405_QC_BSA-001.raw
21 Oct 2024 13:39:32,541 DEBUG: D:\QC\QC_BSA\20240126_QC_BSA-005.raw
21 Oct 2024 13:39:32,541 DEBUG: D:\QC\QC_BSA\20220209_QC_BSA-001.raw
21 Oct 2024 13:39:32,541 DEBUG: D:\QC\QC_BSA\20240126_QC_BSA-002_20240129194709.raw
21 Oct 2024 13:39:32,541 DEBUG: D:\QC\QC_BSA\20240126_QC_BSA-002.raw
21 Oct 2024 13:39:32,541 DEBUG: D:\QC\QC_BSA\20240126_QC_BSA-003.raw
21 Oct 2024 13:39:32,541 DEBUG: D:\QC\QC_BSA\20231116_QC_BSA-003.raw
21 Oct 2024 13:39:32,541 DEBUG: D:\QC\QC_BSA\20220209_QC_BSA-004.raw
21 Oct 2024 13:39:32,541 DEBUG: D:\QC\QC_BSA\20231116_QC_BSA-002.raw
21 Oct 2024 13:39:32,541 DEBUG: D:\QC\QC_BSA\20241021_BSA-QC-01.raw
21 Oct 2024 13:39:37,858 INFO : 98% Done
21 Oct 2024 13:39:37,858 INFO : Done updating previously imported sample file data.
21 Oct 2024 13:39:38,692 INFO : All the related sampleFiles for /data/labkey/files/NCSU - METRIC/METRIC Internal/METRIC Proteomics QC/Eclipse_PSB/@files/METRIC_Eclipse_PSB_All_QCs_2024-10-21_15-21-22.sky.zip have been updated with newer data.
21 Oct 2024 13:39:38,693 INFO : Deleting /data/labkey/files/NCSU - METRIC/METRIC Internal/METRIC Proteomics QC/Eclipse_PSB/@files/METRIC_Eclipse_PSB_All_QCs_2024-10-21_15-21-22.sky.zip
21 Oct 2024 13:39:38,693 INFO : Deleting directory /data/labkey/files/NCSU - METRIC/METRIC Internal/METRIC Proteomics QC/Eclipse_PSB/@files/METRIC_Eclipse_PSB_All_QCs_2024-10-21_15-21-22
21 Oct 2024 13:39:38,693 INFO : Creating and populating temp tables for Proportion values
21 Oct 2024 13:39:38,699 INFO : Setting PrecursorModifiedAreaProportion values on precursorchrominfo
21 Oct 2024 13:39:38,705 INFO : Setting ModifiedAreaProportion values on generalmoleculechrominfo
21 Oct 2024 13:39:38,709 INFO : Cleaning up temp tables
21 Oct 2024 13:39:38,998 INFO : Completed import of Skyline document from METRIC_Eclipse_PSB_All_QCs_2024-10-21_16-36-55.sky.zip
21 Oct 2024 13:39:39,000 INFO : 100% Done
21 Oct 2024 13:39:39,029 INFO : Successfully completed task 'org.labkey.targetedms.pipeline.TargetedMSImportTask'