25 Aug 2021 08:14:06,330 INFO : Starting to run task 'org.labkey.targetedms.pipeline.TargetedMSImportTask' at location 'webserver-high-priority'

25 Aug 2021 08:14:06,333 INFO : Starting to import Skyline document from 20210630_Auto_QC_800_CON_Mix1_2021-08-25_11-13-59.sky.zip

25 Aug 2021 08:14:06,333 INFO : Expanding 20210521_Mix_1_and_2_no_IS.blib

25 Aug 2021 08:14:06,336 INFO : Expanding 20210630_Auto_QC_800_CON_Mix1.skyd

25 Aug 2021 08:14:06,663 INFO : Expanding 20210630_Auto_QC_800_CON_Mix1.sky

25 Aug 2021 08:14:06,690 WARN : The version of this Skyline document is 21.1. This is newer than the highest supported version 20.22

25 Aug 2021 08:14:06,698 INFO : 2% Done

25 Aug 2021 08:14:06,831 DEBUG: Starting to load chromatogram headers

25 Aug 2021 08:14:06,836 DEBUG: Done loading chromatogram headers

25 Aug 2021 08:14:06,990 INFO : Inserting Precursors_Mix_1

25 Aug 2021 08:14:06,999 INFO : 4% Done

25 Aug 2021 08:14:07,034 INFO : 7% Done

25 Aug 2021 08:14:07,070 INFO : 10% Done

25 Aug 2021 08:14:07,110 INFO : 12% Done

25 Aug 2021 08:14:07,145 INFO : 14% Done

25 Aug 2021 08:14:07,186 INFO : 17% Done

25 Aug 2021 08:14:07,217 INFO : 20% Done

25 Aug 2021 08:14:07,247 INFO : 22% Done

25 Aug 2021 08:14:07,280 INFO : 25% Done

25 Aug 2021 08:14:07,315 INFO : 27% Done

25 Aug 2021 08:14:07,347 INFO : 30% Done

25 Aug 2021 08:14:07,378 INFO : 32% Done

25 Aug 2021 08:14:07,408 INFO : 35% Done

25 Aug 2021 08:14:07,438 INFO : 38% Done

25 Aug 2021 08:14:07,467 INFO : 40% Done

25 Aug 2021 08:14:07,496 INFO : 43% Done

25 Aug 2021 08:14:07,525 INFO : 46% Done

25 Aug 2021 08:14:07,554 INFO : 48% Done

25 Aug 2021 08:14:07,585 INFO : 50% Done

25 Aug 2021 08:14:07,616 INFO : 53% Done

25 Aug 2021 08:14:07,647 INFO : 55% Done

25 Aug 2021 08:14:07,679 INFO : 58% Done

25 Aug 2021 08:14:07,713 INFO : 60% Done

25 Aug 2021 08:14:07,738 DEBUG: Total molecules inserted: 23

25 Aug 2021 08:14:07,739 INFO : Done parsing Skyline document.

25 Aug 2021 08:14:07,743 INFO : No group comparisons found.

25 Aug 2021 08:14:07,743 INFO : Calculating calibration curves

25 Aug 2021 08:14:07,743 DEBUG: Calculating calibration curve for Precursors_Mix_1, 1 of 1

25 Aug 2021 08:14:07,987 INFO : 68% Done

25 Aug 2021 08:14:07,991 INFO : Done calculating calibration curves.

25 Aug 2021 08:14:08,985 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210630_OLD_CON.raw in QC folder. 1 of 39

25 Aug 2021 08:14:08,988 INFO : 69% Done

25 Aug 2021 08:14:10,043 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210629_Curve_800CON_04.raw in QC folder. 2 of 39

25 Aug 2021 08:14:10,045 INFO : 70% Done

25 Aug 2021 08:14:11,013 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210506_CON_05.raw in QC folder. 3 of 39

25 Aug 2021 08:14:11,986 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210210_large_800CON_inj8.raw in QC folder. 4 of 39

25 Aug 2021 08:14:11,988 INFO : 71% Done

25 Aug 2021 08:14:12,968 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210506_800CON_A.raw in QC folder. 5 of 39

25 Aug 2021 08:14:12,970 INFO : 72% Done

25 Aug 2021 08:14:13,953 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210825_800CON_04.raw in QC folder. 6 of 39

25 Aug 2021 08:14:13,955 INFO : 73% Done

25 Aug 2021 08:14:14,915 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210629_Curve_800CON_03.raw in QC folder. 7 of 39

25 Aug 2021 08:14:15,941 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210210_large_800CON_inj9.raw in QC folder. 8 of 39

25 Aug 2021 08:14:15,945 INFO : 74% Done

25 Aug 2021 08:14:16,947 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210210_large_800CON_inj3.raw in QC folder. 9 of 39

25 Aug 2021 08:14:16,954 INFO : 75% Done

25 Aug 2021 08:14:17,991 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210506_CON_12.raw in QC folder. 10 of 39

25 Aug 2021 08:14:17,994 INFO : 76% Done

25 Aug 2021 08:14:18,956 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210506_CON_06.raw in QC folder. 11 of 39

25 Aug 2021 08:14:19,925 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210608-SRP_DB_Batch_11-12_MF_CON_A.raw in QC folder. 12 of 39

25 Aug 2021 08:14:19,927 INFO : 77% Done

25 Aug 2021 08:14:20,878 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210611-Water_Samples_800CON.raw in QC folder. 13 of 39

25 Aug 2021 08:14:20,880 INFO : 78% Done

25 Aug 2021 08:14:21,857 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210630_800QC_A.raw in QC folder. 14 of 39

25 Aug 2021 08:14:21,859 INFO : 79% Done

25 Aug 2021 08:14:22,858 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210825_800CON_01.raw in QC folder. 15 of 39

25 Aug 2021 08:14:23,861 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210629_Curve_800CON_02.raw in QC folder. 16 of 39

25 Aug 2021 08:14:23,863 INFO : 80% Done

25 Aug 2021 08:14:24,831 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210506_CON_03.raw in QC folder. 17 of 39

25 Aug 2021 08:14:24,834 INFO : 81% Done

25 Aug 2021 08:14:25,797 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210506_CON_07.raw in QC folder. 18 of 39

25 Aug 2021 08:14:25,799 INFO : 82% Done

25 Aug 2021 08:14:26,750 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210330_800CON.raw in QC folder. 19 of 39

25 Aug 2021 08:14:26,752 INFO : 83% Done

25 Aug 2021 08:14:27,754 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210210_large_800CON_inj4.raw in QC folder. 20 of 39

25 Aug 2021 08:14:28,743 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210608-SRP_DB_Batch_11-12_MF_CON.raw in QC folder. 21 of 39

25 Aug 2021 08:14:28,745 INFO : 84% Done

25 Aug 2021 08:14:29,751 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210629_Curve_800CON.raw in QC folder. 22 of 39

25 Aug 2021 08:14:29,753 INFO : 85% Done

25 Aug 2021 08:14:30,724 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210210_large_800CON_inj1.raw in QC folder. 23 of 39

25 Aug 2021 08:14:30,726 INFO : 86% Done

25 Aug 2021 08:14:31,780 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210506_CON_11.raw in QC folder. 24 of 39

25 Aug 2021 08:14:31,783 INFO : 87% Done

25 Aug 2021 08:14:32,779 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210629_Curve_800CON_01.raw in QC folder. 25 of 39

25 Aug 2021 08:14:33,751 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210611-Water_Samples_800CON_20210614161228.raw in QC folder. 26 of 39

25 Aug 2021 08:14:33,753 INFO : 88% Done

25 Aug 2021 08:14:34,705 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210825_800CON_02.raw in QC folder. 27 of 39

25 Aug 2021 08:14:34,707 INFO : 89% Done

25 Aug 2021 08:14:35,693 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210506_CON_02.raw in QC folder. 28 of 39

25 Aug 2021 08:14:35,695 INFO : 90% Done

25 Aug 2021 08:14:36,727 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210506_CON_08.raw in QC folder. 29 of 39

25 Aug 2021 08:14:37,689 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210506_CON_10.raw in QC folder. 30 of 39

25 Aug 2021 08:14:37,691 INFO : 91% Done

25 Aug 2021 08:14:38,654 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210323_800CON.raw in QC folder. 31 of 39

25 Aug 2021 08:14:38,656 INFO : 92% Done

25 Aug 2021 08:14:39,638 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210506_800CON.raw in QC folder. 32 of 39

25 Aug 2021 08:14:39,641 INFO : 93% Done

25 Aug 2021 08:14:40,606 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210210_large_800CON_inj5.raw in QC folder. 33 of 39

25 Aug 2021 08:14:40,608 INFO : 94% Done

25 Aug 2021 08:14:41,625 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210210_large_800CON_inj2.raw in QC folder. 34 of 39

25 Aug 2021 08:14:42,606 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210210_large_800CON_inj7.raw in QC folder. 35 of 39

25 Aug 2021 08:14:42,608 INFO : 95% Done

25 Aug 2021 08:14:43,568 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210506_CON_04.raw in QC folder. 36 of 39

25 Aug 2021 08:14:43,571 INFO : 96% Done

25 Aug 2021 08:14:44,529 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210506_CON_01.raw in QC folder. 37 of 39

25 Aug 2021 08:14:44,531 INFO : 97% Done

25 Aug 2021 08:14:45,530 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210210_large_800CON_inj6.raw in QC folder. 38 of 39

25 Aug 2021 08:14:46,552 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210506_CON_09.raw in QC folder. 39 of 39

25 Aug 2021 08:14:46,554 INFO : 98% Done

25 Aug 2021 08:14:46,554 INFO : Done updating previously imported sample file data.

25 Aug 2021 08:14:47,018 INFO : All the related sampleFiles for /data/labkey/files/NCSU - METRIC/METRIC Internal/JRE OE240 PFAS/@files/20210630_Auto_QC_800_CON_Mix1_2021-08-25_11-12-58.sky.zip have been updated with newer data.

25 Aug 2021 08:14:47,018 INFO : Deleting /data/labkey/files/NCSU - METRIC/METRIC Internal/JRE OE240 PFAS/@files/20210630_Auto_QC_800_CON_Mix1_2021-08-25_11-12-58.sky.zip

25 Aug 2021 08:14:47,018 INFO : Deleting directory /data/labkey/files/NCSU - METRIC/METRIC Internal/JRE OE240 PFAS/@files/20210630_Auto_QC_800_CON_Mix1_2021-08-25_11-12-58

25 Aug 2021 08:14:47,018 INFO : Creating and populating temp tables for Proportion values

25 Aug 2021 08:14:47,039 INFO : Setting PrecursorModifiedAreaProportion values on precursorchrominfo

25 Aug 2021 08:14:47,113 INFO : Setting ModifiedAreaProportion values on generalmoleculechrominfo

25 Aug 2021 08:14:47,139 INFO : Cleaning up temp tables

25 Aug 2021 08:14:47,362 INFO : Completed import of Skyline document from 20210630_Auto_QC_800_CON_Mix1_2021-08-25_11-13-59.sky.zip

25 Aug 2021 08:14:47,364 INFO : 100% Done

25 Aug 2021 08:14:47,388 INFO : Successfully completed task 'org.labkey.targetedms.pipeline.TargetedMSImportTask'