02 Jul 2021 08:31:57,616 INFO : Starting to run task 'org.labkey.targetedms.pipeline.TargetedMSImportTask' at location 'webserver-high-priority'
02 Jul 2021 08:31:57,618 INFO : Starting to import Skyline document from 20210630_Auto_QC_800_CON_Mix1_2021-07-02_11-31-53.sky.zip
02 Jul 2021 08:31:57,619 INFO : Expanding 20210521_Mix_1_and_2_no_IS.blib
02 Jul 2021 08:31:57,622 INFO : Expanding 20210630_Auto_QC_800_CON_Mix1.skyd
02 Jul 2021 08:31:57,984 INFO : Expanding 20210630_Auto_QC_800_CON_Mix1.sky
02 Jul 2021 08:31:58,031 WARN : The version of this Skyline document is 21.1. This is newer than the highest supported version 20.2
02 Jul 2021 08:31:58,036 INFO : 2% Done
02 Jul 2021 08:31:58,134 DEBUG: Starting to load chromatogram headers
02 Jul 2021 08:31:58,138 DEBUG: Done loading chromatogram headers
02 Jul 2021 08:31:58,232 INFO : Inserting Precursors_Mix_1
02 Jul 2021 08:31:58,239 INFO : 4% Done
02 Jul 2021 08:31:58,273 INFO : 7% Done
02 Jul 2021 08:31:58,304 INFO : 10% Done
02 Jul 2021 08:31:58,334 INFO : 12% Done
02 Jul 2021 08:31:58,364 INFO : 14% Done
02 Jul 2021 08:31:58,393 INFO : 17% Done
02 Jul 2021 08:31:58,421 INFO : 19% Done
02 Jul 2021 08:31:58,448 INFO : 22% Done
02 Jul 2021 08:31:58,476 INFO : 25% Done
02 Jul 2021 08:31:58,505 INFO : 27% Done
02 Jul 2021 08:31:58,531 INFO : 30% Done
02 Jul 2021 08:31:58,558 INFO : 32% Done
02 Jul 2021 08:31:58,585 INFO : 35% Done
02 Jul 2021 08:31:58,612 INFO : 37% Done
02 Jul 2021 08:31:58,637 INFO : 40% Done
02 Jul 2021 08:31:58,661 INFO : 43% Done
02 Jul 2021 08:31:58,686 INFO : 45% Done
02 Jul 2021 08:31:58,712 INFO : 47% Done
02 Jul 2021 08:31:58,738 INFO : 50% Done
02 Jul 2021 08:31:58,763 INFO : 52% Done
02 Jul 2021 08:31:58,789 INFO : 55% Done
02 Jul 2021 08:31:58,815 INFO : 58% Done
02 Jul 2021 08:31:58,843 INFO : 60% Done
02 Jul 2021 08:31:58,864 DEBUG: Total molecules inserted: 23
02 Jul 2021 08:31:58,865 INFO : Done parsing Skyline document.
02 Jul 2021 08:31:59,084 ERROR: Import failed
org.labkey.api.pipeline.PipelineJobException: QC folders require that all documents use the same molecule, but they did not match. Please create a new QC folder if you wish to work with different molecules. Attempted import: [C10H5F17O3S, C10HF19O2, C11H6F17NO4S, C11HF21O2, C12H5F21O3S, C12H8F17NO4S, C12HF23O2, C14HF27O2, C16HF31O2, C4HF7O2, C4HF9O3S, C5HF11O, C5HF9O2, C6H5F9O3S, C6HF11O2, C6HF13O3S, C7HF13O2, C8H2F17NO2S, C8H5F13O3S, C8HF15O2, C8HF17O3S, C9H4F17NO2S, C9HF17O2]. Previously imported: [C10H5F17O3S, C10HF19O2, C11H6F17NO4S, C11HF21O2, C12H5F21O3S, C12H8F17NO4S, C12HF23O2, C14HF27O2, C16HF31O2, C18HF35O2, C4HF7O2, C4HF9O3S, C5HF11O, C5HF9O2, C6H5F9O3S, C6HF11O2, C6HF11O3, C6HF13O3S, C7HF13O2, C8H2F17NO2S, C8H5F13O3S, C8HF15O2, C8HF17O3S, C9H4F17NO2S, C9HF17O2].
at org.labkey.targetedms.SkylineDocImporter.importSkylineDoc(SkylineDocImporter.java:434)
at org.labkey.targetedms.SkylineDocImporter.importRun(SkylineDocImporter.java:244)
at org.labkey.targetedms.pipeline.TargetedMSImportTask.run(TargetedMSImportTask.java:63)
at org.labkey.api.pipeline.PipelineJob.runActiveTask(PipelineJob.java:818)
at org.labkey.api.pipeline.PipelineJob.run(PipelineJob.java:1055)
at org.labkey.pipeline.mule.PipelineJobRunner.run(PipelineJobRunner.java:40)
at jdk.internal.reflect.GeneratedMethodAccessor1292.invoke(Unknown Source)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:567)
at org.mule.impl.model.resolvers.DynamicEntryPoint.invokeMethod(DynamicEntryPoint.java:312)
at org.mule.impl.model.resolvers.DynamicEntryPoint.invoke(DynamicEntryPoint.java:259)
at org.mule.impl.DefaultLifecycleAdapter.intercept(DefaultLifecycleAdapter.java:193)
at org.mule.impl.InterceptorsInvoker.execute(InterceptorsInvoker.java:47)
at org.mule.impl.model.DefaultMuleProxy.run(DefaultMuleProxy.java:470)
at org.mule.impl.work.WorkerContext.run(WorkerContext.java:310)
at edu.emory.mathcs.backport.java.util.concurrent.ThreadPoolExecutor$CallerRunsPolicy.rejectedExecution(ThreadPoolExecutor.java:1486)
at edu.emory.mathcs.backport.java.util.concurrent.ThreadPoolExecutor.reject(ThreadPoolExecutor.java:391)
at edu.emory.mathcs.backport.java.util.concurrent.ThreadPoolExecutor.execute(ThreadPoolExecutor.java:865)
at org.mule.impl.work.ScheduleWorkExecutor.doExecute(ScheduleWorkExecutor.java:39)
at org.mule.impl.work.MuleWorkManager.executeWork(MuleWorkManager.java:277)
at org.mule.impl.work.MuleWorkManager.scheduleWork(MuleWorkManager.java:244)
at org.mule.impl.model.seda.SedaComponent.run(SedaComponent.java:483)
at org.mule.impl.work.WorkerContext.run(WorkerContext.java:310)
at edu.emory.mathcs.backport.java.util.concurrent.ThreadPoolExecutor$Worker.runTask(ThreadPoolExecutor.java:650)
at edu.emory.mathcs.backport.java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:675)
at java.base/java.lang.Thread.run(Thread.java:831)
02 Jul 2021 08:31:59,116 INFO : Failed to complete task 'org.labkey.targetedms.pipeline.TargetedMSImportTask'
02 Jul 2021 08:31:59,117 ERROR: QC folders require that all documents use the same molecule, but they did not match. Please create a new QC folder if you wish to work with different molecules. Attempted import: [C10H5F17O3S, C10HF19O2, C11H6F17NO4S, C11HF21O2, C12H5F21O3S, C12H8F17NO4S, C12HF23O2, C14HF27O2, C16HF31O2, C4HF7O2, C4HF9O3S, C5HF11O, C5HF9O2, C6H5F9O3S, C6HF11O2, C6HF13O3S, C7HF13O2, C8H2F17NO2S, C8H5F13O3S, C8HF15O2, C8HF17O3S, C9H4F17NO2S, C9HF17O2]. Previously imported: [C10H5F17O3S, C10HF19O2, C11H6F17NO4S, C11HF21O2, C12H5F21O3S, C12H8F17NO4S, C12HF23O2, C14HF27O2, C16HF31O2, C18HF35O2, C4HF7O2, C4HF9O3S, C5HF11O, C5HF9O2, C6H5F9O3S, C6HF11O2, C6HF11O3, C6HF13O3S, C7HF13O2, C8H2F17NO2S, C8H5F13O3S, C8HF15O2, C8HF17O3S, C9H4F17NO2S, C9HF17O2].
org.labkey.api.pipeline.PipelineJobException: QC folders require that all documents use the same molecule, but they did not match. Please create a new QC folder if you wish to work with different molecules. Attempted import: [C10H5F17O3S, C10HF19O2, C11H6F17NO4S, C11HF21O2, C12H5F21O3S, C12H8F17NO4S, C12HF23O2, C14HF27O2, C16HF31O2, C4HF7O2, C4HF9O3S, C5HF11O, C5HF9O2, C6H5F9O3S, C6HF11O2, C6HF13O3S, C7HF13O2, C8H2F17NO2S, C8H5F13O3S, C8HF15O2, C8HF17O3S, C9H4F17NO2S, C9HF17O2]. Previously imported: [C10H5F17O3S, C10HF19O2, C11H6F17NO4S, C11HF21O2, C12H5F21O3S, C12H8F17NO4S, C12HF23O2, C14HF27O2, C16HF31O2, C18HF35O2, C4HF7O2, C4HF9O3S, C5HF11O, C5HF9O2, C6H5F9O3S, C6HF11O2, C6HF11O3, C6HF13O3S, C7HF13O2, C8H2F17NO2S, C8H5F13O3S, C8HF15O2, C8HF17O3S, C9H4F17NO2S, C9HF17O2].
at org.labkey.targetedms.SkylineDocImporter.importSkylineDoc(SkylineDocImporter.java:434)
at org.labkey.targetedms.SkylineDocImporter.importRun(SkylineDocImporter.java:244)
at org.labkey.targetedms.pipeline.TargetedMSImportTask.run(TargetedMSImportTask.java:63)
at org.labkey.api.pipeline.PipelineJob.runActiveTask(PipelineJob.java:818)
at org.labkey.api.pipeline.PipelineJob.run(PipelineJob.java:1055)
at org.labkey.pipeline.mule.PipelineJobRunner.run(PipelineJobRunner.java:40)
at jdk.internal.reflect.GeneratedMethodAccessor1292.invoke(Unknown Source)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:567)
at org.mule.impl.model.resolvers.DynamicEntryPoint.invokeMethod(DynamicEntryPoint.java:312)
at org.mule.impl.model.resolvers.DynamicEntryPoint.invoke(DynamicEntryPoint.java:259)
at org.mule.impl.DefaultLifecycleAdapter.intercept(DefaultLifecycleAdapter.java:193)
at org.mule.impl.InterceptorsInvoker.execute(InterceptorsInvoker.java:47)
at org.mule.impl.model.DefaultMuleProxy.run(DefaultMuleProxy.java:470)
at org.mule.impl.work.WorkerContext.run(WorkerContext.java:310)
at edu.emory.mathcs.backport.java.util.concurrent.ThreadPoolExecutor$CallerRunsPolicy.rejectedExecution(ThreadPoolExecutor.java:1486)
at edu.emory.mathcs.backport.java.util.concurrent.ThreadPoolExecutor.reject(ThreadPoolExecutor.java:391)
at edu.emory.mathcs.backport.java.util.concurrent.ThreadPoolExecutor.execute(ThreadPoolExecutor.java:865)
at org.mule.impl.work.ScheduleWorkExecutor.doExecute(ScheduleWorkExecutor.java:39)
at org.mule.impl.work.MuleWorkManager.executeWork(MuleWorkManager.java:277)
at org.mule.impl.work.MuleWorkManager.scheduleWork(MuleWorkManager.java:244)
at org.mule.impl.model.seda.SedaComponent.run(SedaComponent.java:483)
at org.mule.impl.work.WorkerContext.run(WorkerContext.java:310)
at edu.emory.mathcs.backport.java.util.concurrent.ThreadPoolExecutor$Worker.runTask(ThreadPoolExecutor.java:650)
at edu.emory.mathcs.backport.java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:675)
at java.base/java.lang.Thread.run(Thread.java:831)