02 Jul 2021 06:04:21,528 INFO : Starting to run task 'org.labkey.targetedms.pipeline.TargetedMSImportTask' at location 'webserver-high-priority'

02 Jul 2021 06:04:21,531 INFO : Starting to import Skyline document from 20210630_Auto_QC_800_CON_Mix1_2021-07-02_09-04-12.sky.zip

02 Jul 2021 06:04:21,531 INFO : Expanding 20210521_Mix_1_and_2_no_IS.blib

02 Jul 2021 06:04:21,532 INFO : Expanding 20210630_Auto_QC_800_CON_Mix1.skyd

02 Jul 2021 06:04:21,829 INFO : Expanding 20210630_Auto_QC_800_CON_Mix1.sky

02 Jul 2021 06:04:21,872 WARN : The version of this Skyline document is 21.1. This is newer than the highest supported version 20.2

02 Jul 2021 06:04:21,878 INFO : 2% Done

02 Jul 2021 06:04:21,985 DEBUG: Starting to load chromatogram headers

02 Jul 2021 06:04:21,990 DEBUG: Done loading chromatogram headers

02 Jul 2021 06:04:22,101 INFO : Inserting Precursors_Mix_1

02 Jul 2021 06:04:22,108 INFO : 4% Done

02 Jul 2021 06:04:22,151 INFO : 7% Done

02 Jul 2021 06:04:22,184 INFO : 9% Done

02 Jul 2021 06:04:22,217 INFO : 11% Done

02 Jul 2021 06:04:22,246 INFO : 14% Done

02 Jul 2021 06:04:22,279 INFO : 16% Done

02 Jul 2021 06:04:22,312 INFO : 18% Done

02 Jul 2021 06:04:22,346 INFO : 21% Done

02 Jul 2021 06:04:22,375 INFO : 23% Done

02 Jul 2021 06:04:22,406 INFO : 25% Done

02 Jul 2021 06:04:22,436 INFO : 28% Done

02 Jul 2021 06:04:22,464 INFO : 30% Done

02 Jul 2021 06:04:22,491 INFO : 32% Done

02 Jul 2021 06:04:22,522 INFO : 35% Done

02 Jul 2021 06:04:22,550 INFO : 37% Done

02 Jul 2021 06:04:22,577 INFO : 40% Done

02 Jul 2021 06:04:22,604 INFO : 42% Done

02 Jul 2021 06:04:22,631 INFO : 44% Done

02 Jul 2021 06:04:22,664 INFO : 47% Done

02 Jul 2021 06:04:22,693 INFO : 49% Done

02 Jul 2021 06:04:22,721 INFO : 52% Done

02 Jul 2021 06:04:22,750 INFO : 54% Done

02 Jul 2021 06:04:22,780 INFO : 55% Done

02 Jul 2021 06:04:22,799 INFO : 58% Done

02 Jul 2021 06:04:22,829 INFO : 60% Done

02 Jul 2021 06:04:22,852 DEBUG: Total molecules inserted: 25

02 Jul 2021 06:04:22,853 INFO : Done parsing Skyline document.

02 Jul 2021 06:04:22,856 INFO : No group comparisons found.

02 Jul 2021 06:04:22,856 INFO : Calculating calibration curves

02 Jul 2021 06:04:22,856 DEBUG: Calculating calibration curve for Precursors_Mix_1, 1 of 1

02 Jul 2021 06:04:23,071 INFO : 68% Done

02 Jul 2021 06:04:23,076 INFO : Done calculating calibration curves.

02 Jul 2021 06:04:24,271 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210629_Curve_800CON_04.raw in QC folder. 1 of 34

02 Jul 2021 06:04:24,273 INFO : 69% Done

02 Jul 2021 06:04:25,260 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210506_CON_05.raw in QC folder. 2 of 34

02 Jul 2021 06:04:25,262 INFO : 70% Done

02 Jul 2021 06:04:26,228 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210210_large_800CON_inj8.raw in QC folder. 3 of 34

02 Jul 2021 06:04:26,230 INFO : 71% Done

02 Jul 2021 06:04:27,188 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210506_800CON_A.raw in QC folder. 4 of 34

02 Jul 2021 06:04:27,189 INFO : 72% Done

02 Jul 2021 06:04:28,149 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210629_Curve_800CON_03.raw in QC folder. 5 of 34

02 Jul 2021 06:04:28,151 INFO : 73% Done

02 Jul 2021 06:04:29,121 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210210_large_800CON_inj9.raw in QC folder. 6 of 34

02 Jul 2021 06:04:30,085 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210210_large_800CON_inj3.raw in QC folder. 7 of 34

02 Jul 2021 06:04:30,087 INFO : 74% Done

02 Jul 2021 06:04:31,043 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210506_CON_12.raw in QC folder. 8 of 34

02 Jul 2021 06:04:31,045 INFO : 75% Done

02 Jul 2021 06:04:31,975 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210506_CON_06.raw in QC folder. 9 of 34

02 Jul 2021 06:04:31,978 INFO : 76% Done

02 Jul 2021 06:04:32,940 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210608-SRP_DB_Batch_11-12_MF_CON_A.raw in QC folder. 10 of 34

02 Jul 2021 06:04:32,942 INFO : 77% Done

02 Jul 2021 06:04:33,881 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210611-Water_Samples_800CON.raw in QC folder. 11 of 34

02 Jul 2021 06:04:33,883 INFO : 78% Done

02 Jul 2021 06:04:34,840 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210629_Curve_800CON_02.raw in QC folder. 12 of 34

02 Jul 2021 06:04:34,842 INFO : 79% Done

02 Jul 2021 06:04:35,788 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210506_CON_03.raw in QC folder. 13 of 34

02 Jul 2021 06:04:36,758 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210506_CON_07.raw in QC folder. 14 of 34

02 Jul 2021 06:04:36,760 INFO : 80% Done

02 Jul 2021 06:04:37,683 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210330_800CON.raw in QC folder. 15 of 34

02 Jul 2021 06:04:37,685 INFO : 81% Done

02 Jul 2021 06:04:38,674 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210210_large_800CON_inj4.raw in QC folder. 16 of 34

02 Jul 2021 06:04:38,676 INFO : 82% Done

02 Jul 2021 06:04:39,628 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210608-SRP_DB_Batch_11-12_MF_CON.raw in QC folder. 17 of 34

02 Jul 2021 06:04:39,630 INFO : 83% Done

02 Jul 2021 06:04:40,628 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210629_Curve_800CON.raw in QC folder. 18 of 34

02 Jul 2021 06:04:40,630 INFO : 84% Done

02 Jul 2021 06:04:41,661 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210210_large_800CON_inj1.raw in QC folder. 19 of 34

02 Jul 2021 06:04:41,663 INFO : 85% Done

02 Jul 2021 06:04:42,653 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210506_CON_11.raw in QC folder. 20 of 34

02 Jul 2021 06:04:42,655 INFO : 86% Done

02 Jul 2021 06:04:43,595 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210629_Curve_800CON_01.raw in QC folder. 21 of 34

02 Jul 2021 06:04:43,597 INFO : 87% Done

02 Jul 2021 06:04:44,636 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210611-Water_Samples_800CON_20210614161228.raw in QC folder. 22 of 34

02 Jul 2021 06:04:44,638 INFO : 88% Done

02 Jul 2021 06:04:45,593 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210506_CON_02.raw in QC folder. 23 of 34

02 Jul 2021 06:04:46,595 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210506_CON_08.raw in QC folder. 24 of 34

02 Jul 2021 06:04:46,597 INFO : 89% Done

02 Jul 2021 06:04:47,511 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210506_CON_10.raw in QC folder. 25 of 34

02 Jul 2021 06:04:47,513 INFO : 90% Done

02 Jul 2021 06:04:48,484 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210323_800CON.raw in QC folder. 26 of 34

02 Jul 2021 06:04:48,485 INFO : 91% Done

02 Jul 2021 06:04:49,439 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210506_800CON.raw in QC folder. 27 of 34

02 Jul 2021 06:04:49,440 INFO : 92% Done

02 Jul 2021 06:04:50,444 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210210_large_800CON_inj5.raw in QC folder. 28 of 34

02 Jul 2021 06:04:50,445 INFO : 93% Done

02 Jul 2021 06:04:51,399 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210210_large_800CON_inj2.raw in QC folder. 29 of 34

02 Jul 2021 06:04:51,401 INFO : 94% Done

02 Jul 2021 06:04:52,373 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210210_large_800CON_inj7.raw in QC folder. 30 of 34

02 Jul 2021 06:04:53,311 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210506_CON_04.raw in QC folder. 31 of 34

02 Jul 2021 06:04:53,313 INFO : 95% Done

02 Jul 2021 06:04:54,280 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210506_CON_01.raw in QC folder. 32 of 34

02 Jul 2021 06:04:54,282 INFO : 96% Done

02 Jul 2021 06:04:55,225 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210210_large_800CON_inj6.raw in QC folder. 33 of 34

02 Jul 2021 06:04:55,227 INFO : 97% Done

02 Jul 2021 06:04:56,167 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210506_CON_09.raw in QC folder. 34 of 34

02 Jul 2021 06:04:56,169 INFO : 98% Done

02 Jul 2021 06:04:56,169 INFO : Done updating previously imported sample file data.

02 Jul 2021 06:04:56,740 INFO : All the related sampleFiles for /data/labkey/files/NCSU - METRIC/METRIC Internal/JRE OE240 PFAS/@files/20210630_Auto_QC_800_CON_Mix1_2021-06-30_15-09-08.sky.zip have been updated with newer data.

02 Jul 2021 06:04:56,740 INFO : Deleting /data/labkey/files/NCSU - METRIC/METRIC Internal/JRE OE240 PFAS/@files/20210630_Auto_QC_800_CON_Mix1_2021-06-30_15-09-08.sky.zip

02 Jul 2021 06:04:56,740 INFO : Deleting directory /data/labkey/files/NCSU - METRIC/METRIC Internal/JRE OE240 PFAS/@files/20210630_Auto_QC_800_CON_Mix1_2021-06-30_15-09-08

02 Jul 2021 06:04:56,740 INFO : Creating and populating temp tables for Proportion values

02 Jul 2021 06:04:56,761 INFO : Setting PrecursorModifiedAreaProportion values on precursorchrominfo

02 Jul 2021 06:04:56,834 INFO : Setting ModifiedAreaProportion values on generalmoleculechrominfo

02 Jul 2021 06:04:56,859 INFO : Cleaning up temp tables

02 Jul 2021 06:04:57,099 INFO : Completed import of Skyline document from 20210630_Auto_QC_800_CON_Mix1_2021-07-02_09-04-12.sky.zip

02 Jul 2021 06:04:57,101 INFO : 100% Done

02 Jul 2021 06:04:57,123 INFO : Successfully completed task 'org.labkey.targetedms.pipeline.TargetedMSImportTask'