R0040C: /MacCoss/brendan/Instruction/2020-DIA-PUBS/2015-Selevsek

R0040C

2015-Selevsek

Protein

File	os-Selevsek-lowcv_2020-05-04_00-52-09.sky.zip 4 GB SkyP file (link only, 1KB) Full Skyline file Copy relative URL to clipboard Copy full URL to clipboard
Description	REP2 SGDID:S000029676, 2-micron plasmid from 6198-5308, Genome Release 64-1-1, reverse complement, Verified ORF, "Master regulator that acts in concert with Rep1p to regulate transcript levels of the FLP1 gene that promotes plasmid copy amplification; also autoregulates levels of its own transcript"
Decoy	false
Accession	P03872
Note

Sequence Coverage

View Settings

By: Replicate: Modified forms: Combined Stacked

The number displayed on each peptide box is the rank
1										11										21										31										41										51										61										71										81										91
M	D	D	I	E	T	A	K	N	L	T	V	K	A	R	T	A	Y	S	V	W	D	V	C	R	L	F	I	E	M	I	A	P	D	V	D	I	D	I	E	S	K	R	K	S	D	E	L	L	F	P	G	Y	V	I	R	P	M	E	S	L	T	T	G	R	P	Y	G	L	D	S	S	A	E	D	S	S	V	S	S	D	S	S	A	E	V	I	L	P	A	A	K	M	V	K	E	R	F	D	S
															2

101										111										121										131										141										151										161										171										181										191
I	G	N	G	M	L	S	S	Q	E	A	S	Q	A	A	I	D	L	M	L	Q	N	N	K	L	L	D	N	R	K	Q	L	Y	K	S	I	A	I	I	I	G	R	L	P	E	K	D	K	K	R	A	T	E	M	L	M	R	K	M	D	C	T	Q	L	L	V	P	P	A	P	T	E	E	D	V	M	K	L	V	S	V	V	T	Q	L	L	T	L	V	P	P	D	R	Q	A	A	L	I	G	D
																																		3

201										211										221										231										241										251										261										271										281										291
L	F	I	P	E	S	L	K	D	I	F	N	S	F	N	E	L	A	A	E	N	R	L	Q	Q	K	K	S	E	L	E	G	R	T	E	V	N	H	A	N	T	N	E	E	V	P	S	R	R	T	R	S	R	D	T	N	A	R	G	A	Y	K	L	Q	N	T	I	T	E	G	P	K	A	V	P	T	K	K	R	R	V	A	T	R	V	R	G	R	K	S	R	N	T	S	R	V
																																																														1

Intensity

(Log 10 base)

Features

Select All

Chain

Compositionally biased region

Modified residue

Region of interest

Annotations for REP2_YEAST

Description	Partitioning protein REP2 (short name: R2)
Gene name	REP2
Organisms	Saccharomyces cerevisiae Saccharomyces cerevisiae (strain ATCC 204508 / S288c)

Genbank IDs	GIs	Swiss-Prot Accessions	Swiss-Prot Names	Ensembl	IPI Numbers	GO Categories	Biological Processes
NP_040491.1	none loaded	P03872	REP2_YEAST	none loaded	none loaded	GO:0005634 GO:0030543	Plasmid partition

Peptides

Select All Select None Show Selected Show Unselected Show All	Peptide Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Bar Chart Pie Chart Quick Chart	Peptide Neutral Mass Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	Missed Cleavages Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	Avg. Measured RT Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	Predicted RT Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	RT Score Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart
	TAYSVWDVCR	1255.5656	0	69.1572	70.8800	43.38102
	SIAIIIGR	841.5385	0	68.8542	68.7400	40.904003
	LQNTITEGPK	1099.5873	0	27.4644	27.3700	-7.1744475

Chromatograms

Display Chart Settings

Summary Charts

Peak Areas

Retention Times