Skyline document import - LINCS_P100_PRM_Plate29_03H_annotated_minimized_2018-05-02_21-16-28.sky.zip

P100_GctMaker

Job Status

Created: 2020-12-23 14:32:37
Modified: 2020-12-23 21:34:35
Email: vsharma@uw.edu
Status: COMPLETE
Info:
Description: Skyline document import - LINCS_P100_PRM_Plate29_03H_annotated_minimized_2018-05-02_21-16-28.sky.zip
File Path: /data/labkey/files/LINCS/Publications/Touchstone_2/P100_GctMaker/@files/LINCS_P100_PRM_Plate29_03H_annotated_minimized_2018-05-02_21-16-28.sky_2020-12-23_14-32-59.log
Files: LINCS_P100_PRM_Plate29_03H_annotated_minimized_2018-05-02_21-16-28.sky_2020-12-23_14-32-59.log
Completed Runs: LINCS_P100_PRM_Plate29_03H_annotated_minimized_2018-05-02_21-16-28.sky.zip

Log File


23 Dec 2020 21:10:35,443 INFO : Starting to run task 'org.labkey.targetedms.pipeline.TargetedMSImportTask' at location 'webserver-high-priority'
23 Dec 2020 21:10:35,514 INFO : Starting to import Skyline document from LINCS_P100_PRM_Plate29_03H_annotated_minimized_2018-05-02_21-16-28.sky.zip
23 Dec 2020 21:10:35,529 INFO : Expanding LINCSP100_final_90.blib
23 Dec 2020 21:10:35,607 INFO : Expanding LINCSP100_final_90.redundant.blib
23 Dec 2020 21:10:35,629 INFO : Expanding LINCS_P100_PRM_Plate29_03H_annotated_minimized.skyd
23 Dec 2020 21:10:41,119 INFO : Expanding LINCS_P100_PRM_Plate29_03H_annotated_minimized.sky
23 Dec 2020 21:10:41,630 INFO : 1% Done
23 Dec 2020 21:10:45,074 INFO : Inserting NANS_CL01
23 Dec 2020 21:10:45,092 INFO : 2% Done
23 Dec 2020 21:10:46,395 INFO : Inserting AHNAK_CL01
23 Dec 2020 21:10:48,483 INFO : Inserting DDX54_CL02
23 Dec 2020 21:10:48,503 INFO : 3% Done
23 Dec 2020 21:10:49,513 INFO : Inserting HSPC216_CL02
23 Dec 2020 21:10:49,531 INFO : 5% Done
23 Dec 2020 21:10:50,479 INFO : Inserting PFKF_CL03
23 Dec 2020 21:10:50,497 INFO : 6% Done
23 Dec 2020 21:10:51,946 INFO : Inserting TMSL3_CL03
23 Dec 2020 21:10:54,195 INFO : 7% Done
23 Dec 2020 21:10:56,486 INFO : Inserting AD029_CL04
23 Dec 2020 21:10:56,504 INFO : 8% Done
23 Dec 2020 21:10:57,891 INFO : Inserting CDC2_CL04
23 Dec 2020 21:10:57,908 INFO : 9% Done
23 Dec 2020 21:10:59,340 INFO : Inserting ATAD2_CL05
23 Dec 2020 21:10:59,355 INFO : 10% Done
23 Dec 2020 21:11:00,347 INFO : Inserting BAT2D1_CL05
23 Dec 2020 21:11:01,517 INFO : Inserting AGS1_CL06
23 Dec 2020 21:11:02,430 INFO : Inserting A2D_CL07
23 Dec 2020 21:11:02,449 INFO : 11% Done
23 Dec 2020 21:11:03,981 INFO : Inserting ZNF672_CL07
23 Dec 2020 21:11:03,996 INFO : 12% Done
23 Dec 2020 21:11:04,947 INFO : Inserting ABI1_CL08
23 Dec 2020 21:11:04,964 INFO : 13% Done
23 Dec 2020 21:11:06,279 INFO : Inserting FOSL2_CL08
23 Dec 2020 21:11:06,298 INFO : 14% Done
23 Dec 2020 21:11:10,399 INFO : Inserting C17orf85_CL09
23 Dec 2020 21:11:10,426 INFO : 16% Done
23 Dec 2020 21:11:13,289 INFO : Inserting EPLIN_CL09
23 Dec 2020 21:11:13,306 INFO : 17% Done
23 Dec 2020 21:11:14,637 INFO : Inserting BAF155_CL10
23 Dec 2020 21:11:14,652 INFO : 18% Done
23 Dec 2020 21:11:15,669 INFO : Inserting FUBP2_CL10
23 Dec 2020 21:11:16,818 INFO : Inserting MAP3K2_CL11
23 Dec 2020 21:11:18,192 INFO : Inserting FAS_CL12
23 Dec 2020 21:11:18,210 INFO : 19% Done
23 Dec 2020 21:11:19,946 INFO : 20% Done
23 Dec 2020 21:11:21,935 INFO : Inserting ARM2_CL13
23 Dec 2020 21:11:21,953 INFO : 21% Done
23 Dec 2020 21:11:23,260 INFO : Inserting C9orf88_CL14
23 Dec 2020 21:11:23,288 INFO : 22% Done
23 Dec 2020 21:11:26,081 INFO : Inserting ISPK1_CL14
23 Dec 2020 21:11:26,099 INFO : 23% Done
23 Dec 2020 21:11:27,625 INFO : Inserting RBM14_CL15
23 Dec 2020 21:11:27,640 INFO : 24% Done
23 Dec 2020 21:11:28,740 INFO : Inserting KIAA0701_CL15
23 Dec 2020 21:11:28,767 INFO : 25% Done
23 Dec 2020 21:11:31,667 INFO : Inserting RBM17_CL16
23 Dec 2020 21:11:31,688 INFO : 26% Done
23 Dec 2020 21:11:33,644 INFO : Inserting SLC38A1_CL16
23 Dec 2020 21:11:33,662 INFO : 27% Done
23 Dec 2020 21:11:35,020 INFO : Inserting NOC2L_CL17
23 Dec 2020 21:11:35,053 INFO : 28% Done
23 Dec 2020 21:11:36,940 INFO : Inserting RPL12_CL17
23 Dec 2020 21:11:36,960 INFO : 29% Done
23 Dec 2020 21:11:38,812 INFO : Inserting DDX48_CL18
23 Dec 2020 21:11:38,831 INFO : 30% Done
23 Dec 2020 21:11:42,189 INFO : Inserting HCA90_CL18
23 Dec 2020 21:11:42,210 INFO : 31% Done
23 Dec 2020 21:11:44,033 INFO : Inserting CAT53_CL19
23 Dec 2020 21:11:44,050 INFO : 32% Done
23 Dec 2020 21:11:45,442 INFO : Inserting EPLIN_CL19
23 Dec 2020 21:11:45,461 INFO : 33% Done
23 Dec 2020 21:11:47,181 INFO : Inserting HBXAP_CL21
23 Dec 2020 21:11:47,200 INFO : 34% Done
23 Dec 2020 21:11:48,781 INFO : Inserting DCAF1_CL22
23 Dec 2020 21:11:50,367 INFO : Inserting CDW2_CL22
23 Dec 2020 21:11:50,386 INFO : 35% Done
23 Dec 2020 21:11:52,123 INFO : Inserting ANLN_CL23
23 Dec 2020 21:11:52,139 INFO : 36% Done
23 Dec 2020 21:11:53,389 INFO : Inserting OCIA_CL23
23 Dec 2020 21:11:53,404 INFO : 37% Done
23 Dec 2020 21:11:55,096 INFO : Inserting FAM76B_CL24
23 Dec 2020 21:11:55,113 INFO : 38% Done
23 Dec 2020 21:11:56,586 INFO : Inserting HAT1_CL25
23 Dec 2020 21:11:57,163 INFO : Inserting BRAF_CL26
23 Dec 2020 21:11:57,172 INFO : 39% Done
23 Dec 2020 21:11:57,808 INFO : Inserting DYRK_CL27
23 Dec 2020 21:11:57,826 INFO : 40% Done
23 Dec 2020 21:11:59,364 INFO : Inserting LRWD1_CL27
23 Dec 2020 21:11:59,382 INFO : 41% Done
23 Dec 2020 21:12:00,980 INFO : Inserting ALS2_CL28
23 Dec 2020 21:12:00,998 INFO : 42% Done
23 Dec 2020 21:12:02,728 INFO : Inserting BRD4_CL29
23 Dec 2020 21:12:04,219 INFO : Inserting ZC3H14_CL29
23 Dec 2020 21:12:04,239 INFO : 43% Done
23 Dec 2020 21:12:06,040 INFO : Inserting KIF4_CL30
23 Dec 2020 21:12:06,058 INFO : 44% Done
23 Dec 2020 21:12:06,867 INFO : Inserting MAP3K7_CL30
23 Dec 2020 21:12:06,877 INFO : 45% Done
23 Dec 2020 21:12:07,631 INFO : Inserting KIAA0722_CL31
23 Dec 2020 21:12:07,640 INFO : 46% Done
23 Dec 2020 21:12:08,239 INFO : Inserting PAK2_CL31
23 Dec 2020 21:12:08,912 INFO : Inserting LAP2_CL32
23 Dec 2020 21:12:08,922 INFO : 48% Done
23 Dec 2020 21:12:09,757 INFO : Inserting BAT2_CL33
23 Dec 2020 21:12:09,767 INFO : 49% Done
23 Dec 2020 21:12:10,608 INFO : Inserting My038_CL33
23 Dec 2020 21:12:10,618 INFO : 50% Done
23 Dec 2020 21:12:11,425 INFO : Inserting EMK1_CL34
23 Dec 2020 21:12:12,142 INFO : Inserting WDR20_CL34
23 Dec 2020 21:12:12,152 INFO : 51% Done
23 Dec 2020 21:12:12,952 INFO : Inserting THRAP3_CL35
23 Dec 2020 21:12:12,960 INFO : 52% Done
23 Dec 2020 21:12:13,524 INFO : Inserting CAIN_CL35
23 Dec 2020 21:12:13,534 INFO : 53% Done
23 Dec 2020 21:12:14,226 INFO : Inserting GPATC8_CL37
23 Dec 2020 21:12:14,234 INFO : 54% Done
23 Dec 2020 21:12:14,701 INFO : Inserting RP11-373M8.1-002_CL37
23 Dec 2020 21:12:15,326 INFO : Inserting KIAA1734_CL38
23 Dec 2020 21:12:15,422 INFO : Inserting MAP4_CL38
23 Dec 2020 21:12:15,437 INFO : 55% Done
23 Dec 2020 21:12:15,536 INFO : Inserting KIAA0217_CL39
23 Dec 2020 21:12:15,544 INFO : 56% Done
23 Dec 2020 21:12:15,641 INFO : Inserting CTG26_CL40
23 Dec 2020 21:12:15,651 INFO : 57% Done
23 Dec 2020 21:12:15,756 INFO : Inserting KIAA1991_CL40
23 Dec 2020 21:12:15,765 INFO : 58% Done
23 Dec 2020 21:12:15,871 INFO : Inserting DBP2_CL41
23 Dec 2020 21:12:15,881 INFO : 59% Done
23 Dec 2020 21:12:15,980 INFO : Inserting ARS2_CL42
23 Dec 2020 21:12:15,991 INFO : 60% Done
23 Dec 2020 21:12:16,086 INFO : Inserting KIAA1321_CL42
23 Dec 2020 21:12:16,096 INFO : 61% Done
23 Dec 2020 21:12:16,202 INFO : Inserting MAPKAPK1A_CL43
23 Dec 2020 21:12:16,214 INFO : 62% Done
23 Dec 2020 21:12:16,415 INFO : Inserting C22orf9_CL43
23 Dec 2020 21:12:16,448 INFO : 63% Done
23 Dec 2020 21:12:16,564 INFO : Inserting KIAA1844_CL44
23 Dec 2020 21:12:16,578 INFO : 64% Done
23 Dec 2020 21:12:16,702 INFO : Inserting CCNYL1_CL45
23 Dec 2020 21:12:16,715 INFO : 65% Done
23 Dec 2020 21:12:16,823 INFO : Inserting OK/SW-cl.2_CL46
23 Dec 2020 21:12:16,832 INFO : 66% Done
23 Dec 2020 21:12:16,930 INFO : Inserting PDK1_CL46
23 Dec 2020 21:12:17,041 INFO : Inserting PLEC1_CL47
23 Dec 2020 21:12:17,051 INFO : 67% Done
23 Dec 2020 21:12:17,261 INFO : Inserting CASC3_CL48
23 Dec 2020 21:12:17,271 INFO : 68% Done
23 Dec 2020 21:12:17,372 INFO : Inserting BAT2D1_CL48
23 Dec 2020 21:12:17,381 INFO : 69% Done
23 Dec 2020 21:12:17,481 INFO : Inserting LAP2_CL49
23 Dec 2020 21:12:17,491 INFO : 70% Done
23 Dec 2020 21:12:17,592 INFO : Inserting TB7_CL49
23 Dec 2020 21:12:17,603 INFO : 71% Done
23 Dec 2020 21:12:17,706 INFO : Inserting IQGAP3_CL50
23 Dec 2020 21:12:17,715 INFO : 72% Done
23 Dec 2020 21:12:17,884 INFO : Inserting NFATC2IP_CL50
23 Dec 2020 21:12:17,904 INFO : 73% Done
23 Dec 2020 21:12:18,140 INFO : Inserting BAF45D_CL51
23 Dec 2020 21:12:18,159 INFO : 74% Done
23 Dec 2020 21:12:18,404 INFO : Inserting PP8000_CL51
23 Dec 2020 21:12:18,668 INFO : Inserting HSPC075_CL52
23 Dec 2020 21:12:18,686 INFO : 75% Done
23 Dec 2020 21:12:18,930 INFO : Inserting C13orf8_CL52
23 Dec 2020 21:12:18,950 INFO : 76% Done
23 Dec 2020 21:12:19,203 INFO : Inserting JUND_CL53
23 Dec 2020 21:12:19,221 INFO : 77% Done
23 Dec 2020 21:12:19,470 INFO : Inserting CLTA_CL53
23 Dec 2020 21:12:19,486 INFO : 78% Done
23 Dec 2020 21:12:19,705 INFO : Inserting KIAA0035_CL54
23 Dec 2020 21:12:19,856 INFO : Inserting AP1GBP1_CL55
23 Dec 2020 21:12:19,865 INFO : 79% Done
23 Dec 2020 21:12:19,966 INFO : Inserting CIN85_CL55
23 Dec 2020 21:12:19,975 INFO : 80% Done
23 Dec 2020 21:12:20,079 INFO : None of the 147456 TransitionChromInfos in the file were imported because they exceed the limit of 100000
23 Dec 2020 21:34:28,454 INFO : Updated 18432 PrecursorChromInfos with transition chromatogram index information
23 Dec 2020 21:34:28,491 INFO : Done parsing Skyline document.
23 Dec 2020 21:34:28,526 INFO : No group comparisons found.
23 Dec 2020 21:34:28,527 INFO : Calculating calibration curves
23 Dec 2020 21:34:28,632 INFO : 81% Done
23 Dec 2020 21:34:28,789 INFO : 82% Done
23 Dec 2020 21:34:29,005 INFO : 83% Done
23 Dec 2020 21:34:29,173 INFO : 84% Done
23 Dec 2020 21:34:29,371 INFO : 85% Done
23 Dec 2020 21:34:29,570 INFO : 86% Done
23 Dec 2020 21:34:29,757 INFO : 87% Done
23 Dec 2020 21:34:29,939 INFO : 88% Done
23 Dec 2020 21:34:30,145 INFO : 89% Done
23 Dec 2020 21:34:30,354 INFO : 90% Done
23 Dec 2020 21:34:30,603 INFO : 91% Done
23 Dec 2020 21:34:30,828 INFO : 92% Done
23 Dec 2020 21:34:31,025 INFO : 93% Done
23 Dec 2020 21:34:31,214 INFO : 94% Done
23 Dec 2020 21:34:31,460 INFO : 95% Done
23 Dec 2020 21:34:31,652 INFO : 96% Done
23 Dec 2020 21:34:31,789 INFO : 97% Done
23 Dec 2020 21:34:31,986 INFO : 98% Done
23 Dec 2020 21:34:32,092 INFO : Done calculating calibration curves.
23 Dec 2020 21:34:32,138 INFO : Creating and populating temp tables for Proportion values
23 Dec 2020 21:34:32,398 INFO : Setting PrecursorModifiedAreaProportion values on precursorchrominfo
23 Dec 2020 21:34:34,224 INFO : Setting ModifiedAreaProportion values on generalmoleculechrominfo
23 Dec 2020 21:34:34,873 INFO : Cleaning up temp tables
23 Dec 2020 21:34:35,193 INFO : Completed import of Skyline document from LINCS_P100_PRM_Plate29_03H_annotated_minimized_2018-05-02_21-16-28.sky.zip
23 Dec 2020 21:34:35,199 INFO : 100% Done
23 Dec 2020 21:34:35,287 INFO : Successfully completed task 'org.labkey.targetedms.pipeline.TargetedMSImportTask'