23 Dec 2020 16:40:34,108 INFO : Starting to run task 'org.labkey.targetedms.pipeline.TargetedMSImportTask' at location 'webserver-high-priority'
23 Dec 2020 16:40:34,122 INFO : Starting to import Skyline document from LINCS_P100_DIA_Plate23_annotated_minimized_2018-05-02_18-13-55.sky.zip
23 Dec 2020 16:40:34,150 INFO : Expanding P100_DIA_CE30_PurePeptides.blib
23 Dec 2020 16:40:34,159 INFO : Expanding LINCS_P100_DIA_Plate23_annotated_minimized.skyd
23 Dec 2020 16:40:36,038 INFO : Expanding LINCS_P100_DIA_Plate23_annotated_minimized.sky
23 Dec 2020 16:40:36,514 INFO : 1% Done
23 Dec 2020 16:40:37,545 DEBUG: Starting to load chromatogram headers
23 Dec 2020 16:40:37,567 DEBUG: Done loading chromatogram headers
23 Dec 2020 16:40:38,460 INFO : Inserting NANS_CL01
23 Dec 2020 16:40:38,993 DEBUG: Total peptides inserted: 1
23 Dec 2020 16:40:38,994 INFO : Inserting AHNAK_CL01
23 Dec 2020 16:40:39,031 INFO : 3% Done
23 Dec 2020 16:40:39,581 DEBUG: Total peptides inserted: 1
23 Dec 2020 16:40:39,582 INFO : Inserting DDX54_CL02
23 Dec 2020 16:40:40,002 DEBUG: Total peptides inserted: 1
23 Dec 2020 16:40:40,003 INFO : Inserting HSPC216_CL02
23 Dec 2020 16:40:40,012 INFO : 4% Done
23 Dec 2020 16:40:40,366 DEBUG: Total peptides inserted: 1
23 Dec 2020 16:40:40,366 INFO : Inserting PFKF_CL03
23 Dec 2020 16:40:40,378 INFO : 5% Done
23 Dec 2020 16:40:40,852 DEBUG: Total peptides inserted: 1
23 Dec 2020 16:40:40,853 INFO : Inserting TMSL3_CL03
23 Dec 2020 16:40:40,862 INFO : 6% Done
23 Dec 2020 16:40:41,243 INFO : 7% Done
23 Dec 2020 16:40:41,706 DEBUG: Total peptides inserted: 2
23 Dec 2020 16:40:41,707 INFO : Inserting AD029_CL04
23 Dec 2020 16:40:41,717 INFO : 8% Done
23 Dec 2020 16:40:42,125 DEBUG: Total peptides inserted: 1
23 Dec 2020 16:40:42,126 INFO : Inserting CDC2_CL04
23 Dec 2020 16:40:42,137 INFO : 9% Done
23 Dec 2020 16:40:42,539 DEBUG: Total peptides inserted: 1
23 Dec 2020 16:40:42,540 INFO : Inserting ATAD2_CL05
23 Dec 2020 16:40:42,555 INFO : 10% Done
23 Dec 2020 16:40:43,177 DEBUG: Total peptides inserted: 1
23 Dec 2020 16:40:43,178 INFO : Inserting BAT2D1_CL05
23 Dec 2020 16:40:43,187 INFO : 11% Done
23 Dec 2020 16:40:43,528 DEBUG: Total peptides inserted: 1
23 Dec 2020 16:40:43,529 INFO : Inserting AGS1_CL06
23 Dec 2020 16:40:43,539 INFO : 12% Done
23 Dec 2020 16:40:43,977 DEBUG: Total peptides inserted: 1
23 Dec 2020 16:40:43,978 INFO : Inserting A2D_CL07
23 Dec 2020 16:40:44,342 DEBUG: Total peptides inserted: 1
23 Dec 2020 16:40:44,343 INFO : Inserting ZNF672_CL07
23 Dec 2020 16:40:44,354 INFO : 13% Done
23 Dec 2020 16:40:44,826 DEBUG: Total peptides inserted: 1
23 Dec 2020 16:40:44,827 INFO : Inserting ABI1_CL08
23 Dec 2020 16:40:44,840 INFO : 14% Done
23 Dec 2020 16:40:45,591 DEBUG: Total peptides inserted: 1
23 Dec 2020 16:40:45,592 INFO : Inserting FOSL2_CL08
23 Dec 2020 16:40:45,606 INFO : 15% Done
23 Dec 2020 16:40:45,988 INFO : 16% Done
23 Dec 2020 16:40:46,327 DEBUG: Total peptides inserted: 2
23 Dec 2020 16:40:46,328 INFO : Inserting C17orf85_CL09
23 Dec 2020 16:40:46,739 DEBUG: Total peptides inserted: 1
23 Dec 2020 16:40:46,739 INFO : Inserting EPLIN_CL09
23 Dec 2020 16:40:46,750 INFO : 17% Done
23 Dec 2020 16:40:47,159 DEBUG: Total peptides inserted: 1
23 Dec 2020 16:40:47,161 INFO : Inserting BAF155_CL10
23 Dec 2020 16:40:47,172 INFO : 18% Done
23 Dec 2020 16:40:47,678 DEBUG: Total peptides inserted: 1
23 Dec 2020 16:40:47,678 INFO : Inserting FUBP2_CL10
23 Dec 2020 16:40:47,689 INFO : 19% Done
23 Dec 2020 16:40:48,202 DEBUG: Total peptides inserted: 1
23 Dec 2020 16:40:48,203 INFO : Inserting MAP3K2_CL11
23 Dec 2020 16:40:48,223 INFO : 20% Done
23 Dec 2020 16:40:48,817 DEBUG: Total peptides inserted: 1
23 Dec 2020 16:40:48,818 INFO : Inserting FAS_CL12
23 Dec 2020 16:40:48,838 INFO : 21% Done
23 Dec 2020 16:40:49,444 INFO : 22% Done
23 Dec 2020 16:40:49,928 DEBUG: Total peptides inserted: 2
23 Dec 2020 16:40:49,929 INFO : Inserting ARM2_CL13
23 Dec 2020 16:40:49,941 INFO : 23% Done
23 Dec 2020 16:40:50,434 DEBUG: Total peptides inserted: 1
23 Dec 2020 16:40:50,436 INFO : Inserting C9orf88_CL14
23 Dec 2020 16:40:50,446 INFO : 24% Done
23 Dec 2020 16:40:50,858 DEBUG: Total peptides inserted: 1
23 Dec 2020 16:40:50,859 INFO : Inserting ISPK1_CL14
23 Dec 2020 16:40:50,870 INFO : 25% Done
23 Dec 2020 16:40:51,423 DEBUG: Total peptides inserted: 1
23 Dec 2020 16:40:51,424 INFO : Inserting RBM14_CL15
23 Dec 2020 16:40:51,928 DEBUG: Total peptides inserted: 1
23 Dec 2020 16:40:51,929 INFO : Inserting KIAA0701_CL15
23 Dec 2020 16:40:51,941 INFO : 26% Done
23 Dec 2020 16:40:52,599 DEBUG: Total peptides inserted: 1
23 Dec 2020 16:40:52,600 INFO : Inserting RBM17_CL16
23 Dec 2020 16:40:52,621 INFO : 27% Done
23 Dec 2020 16:40:53,185 DEBUG: Total peptides inserted: 1
23 Dec 2020 16:40:53,186 INFO : Inserting SLC38A1_CL16
23 Dec 2020 16:40:53,207 INFO : 28% Done
23 Dec 2020 16:40:53,788 DEBUG: Total peptides inserted: 1
23 Dec 2020 16:40:53,789 INFO : Inserting NOC2L_CL17
23 Dec 2020 16:40:53,813 INFO : 29% Done
23 Dec 2020 16:40:54,579 DEBUG: Total peptides inserted: 1
23 Dec 2020 16:40:54,580 INFO : Inserting RPL12_CL17
23 Dec 2020 16:40:54,611 INFO : 31% Done
23 Dec 2020 16:40:55,536 DEBUG: Total peptides inserted: 1
23 Dec 2020 16:40:55,537 INFO : Inserting DDX48_CL18
23 Dec 2020 16:40:55,569 INFO : 32% Done
23 Dec 2020 16:40:56,505 INFO : 33% Done
23 Dec 2020 16:40:57,232 DEBUG: Total peptides inserted: 2
23 Dec 2020 16:40:57,233 INFO : Inserting HCA90_CL18
23 Dec 2020 16:40:57,246 INFO : 34% Done
23 Dec 2020 16:40:57,791 DEBUG: Total peptides inserted: 1
23 Dec 2020 16:40:57,795 INFO : 35% Done
23 Dec 2020 16:40:57,796 INFO : Inserting CAT53_CL19
23 Dec 2020 16:40:57,810 INFO : 36% Done
23 Dec 2020 16:40:58,467 DEBUG: Total peptides inserted: 1
23 Dec 2020 16:40:58,468 INFO : Inserting EPLIN_CL19
23 Dec 2020 16:40:58,478 INFO : 37% Done
23 Dec 2020 16:40:58,884 DEBUG: Total peptides inserted: 1
23 Dec 2020 16:40:58,885 INFO : Inserting HBXAP_CL21
23 Dec 2020 16:40:58,898 INFO : 38% Done
23 Dec 2020 16:40:59,388 DEBUG: Total peptides inserted: 1
23 Dec 2020 16:40:59,389 INFO : Inserting DCAF1_CL22
23 Dec 2020 16:40:59,402 INFO : 39% Done
23 Dec 2020 16:40:59,986 DEBUG: Total peptides inserted: 1
23 Dec 2020 16:40:59,987 INFO : Inserting CDW2_CL22
23 Dec 2020 16:40:59,997 INFO : 40% Done
23 Dec 2020 16:41:00,411 DEBUG: Total peptides inserted: 1
23 Dec 2020 16:41:00,412 INFO : Inserting ANLN_CL23
23 Dec 2020 16:41:00,425 INFO : 42% Done
23 Dec 2020 16:41:00,975 DEBUG: Total peptides inserted: 1
23 Dec 2020 16:41:00,981 INFO : Inserting OCIA_CL23
23 Dec 2020 16:41:01,401 DEBUG: Total peptides inserted: 1
23 Dec 2020 16:41:01,402 INFO : Inserting FAM76B_CL24
23 Dec 2020 16:41:01,414 INFO : 43% Done
23 Dec 2020 16:41:01,932 DEBUG: Total peptides inserted: 1
23 Dec 2020 16:41:01,933 INFO : Inserting HAT1_CL25
23 Dec 2020 16:41:01,942 INFO : 44% Done
23 Dec 2020 16:41:02,287 DEBUG: Total peptides inserted: 1
23 Dec 2020 16:41:02,288 INFO : Inserting BRAF_CL26
23 Dec 2020 16:41:02,299 INFO : 45% Done
23 Dec 2020 16:41:02,830 DEBUG: Total peptides inserted: 1
23 Dec 2020 16:41:02,831 INFO : Inserting DYRK_CL27
23 Dec 2020 16:41:02,842 INFO : 46% Done
23 Dec 2020 16:41:03,520 DEBUG: Total peptides inserted: 1
23 Dec 2020 16:41:03,521 INFO : Inserting LRWD1_CL27
23 Dec 2020 16:41:03,547 INFO : 47% Done
23 Dec 2020 16:41:04,295 DEBUG: Total peptides inserted: 1
23 Dec 2020 16:41:04,296 INFO : Inserting ALS2_CL28
23 Dec 2020 16:41:04,315 INFO : 48% Done
23 Dec 2020 16:41:04,850 DEBUG: Total peptides inserted: 1
23 Dec 2020 16:41:04,851 INFO : Inserting BRD4_CL29
23 Dec 2020 16:41:04,883 INFO : 49% Done
23 Dec 2020 16:41:05,795 DEBUG: Total peptides inserted: 1
23 Dec 2020 16:41:05,796 INFO : Inserting ZC3H14_CL29
23 Dec 2020 16:41:05,821 INFO : 50% Done
23 Dec 2020 16:41:06,512 DEBUG: Total peptides inserted: 1
23 Dec 2020 16:41:06,513 INFO : Inserting KIF4_CL30
23 Dec 2020 16:41:06,535 INFO : 51% Done
23 Dec 2020 16:41:07,204 DEBUG: Total peptides inserted: 1
23 Dec 2020 16:41:07,206 INFO : Inserting MAP3K7_CL30
23 Dec 2020 16:41:07,224 INFO : 52% Done
23 Dec 2020 16:41:07,693 DEBUG: Total peptides inserted: 1
23 Dec 2020 16:41:07,694 INFO : Inserting KIAA0722_CL31
23 Dec 2020 16:41:07,713 INFO : 53% Done
23 Dec 2020 16:41:08,306 DEBUG: Total peptides inserted: 1
23 Dec 2020 16:41:08,307 INFO : Inserting PAK2_CL31
23 Dec 2020 16:41:08,332 INFO : 54% Done
23 Dec 2020 16:41:09,102 DEBUG: Total peptides inserted: 1
23 Dec 2020 16:41:09,103 INFO : Inserting LAP2_CL32
23 Dec 2020 16:41:09,124 INFO : 55% Done
23 Dec 2020 16:41:09,766 DEBUG: Total peptides inserted: 1
23 Dec 2020 16:41:09,767 INFO : Inserting BAT2_CL33
23 Dec 2020 16:41:09,793 INFO : 56% Done
23 Dec 2020 16:41:10,518 DEBUG: Total peptides inserted: 1
23 Dec 2020 16:41:10,519 INFO : Inserting My038_CL33
23 Dec 2020 16:41:10,551 INFO : 58% Done
23 Dec 2020 16:41:11,480 DEBUG: Total peptides inserted: 1
23 Dec 2020 16:41:11,481 INFO : Inserting EMK1_CL34
23 Dec 2020 16:41:12,097 DEBUG: Total peptides inserted: 1
23 Dec 2020 16:41:12,098 INFO : Inserting WDR20_CL34
23 Dec 2020 16:41:12,125 INFO : 60% Done
23 Dec 2020 16:41:12,965 DEBUG: Total peptides inserted: 1
23 Dec 2020 16:41:12,967 INFO : Inserting THRAP3_CL35
23 Dec 2020 16:41:12,997 INFO : 61% Done
23 Dec 2020 16:41:13,887 DEBUG: Total peptides inserted: 1
23 Dec 2020 16:41:13,888 INFO : Inserting CAIN_CL35
23 Dec 2020 16:41:13,909 INFO : 62% Done
23 Dec 2020 16:41:14,469 DEBUG: Total peptides inserted: 1
23 Dec 2020 16:41:14,470 INFO : Inserting GPATC8_CL37
23 Dec 2020 16:41:14,497 INFO : 63% Done
23 Dec 2020 16:41:15,265 DEBUG: Total peptides inserted: 1
23 Dec 2020 16:41:15,266 INFO : Inserting RP11-373M8.1-002_CL37
23 Dec 2020 16:41:15,288 INFO : 64% Done
23 Dec 2020 16:41:15,990 DEBUG: Total peptides inserted: 1
23 Dec 2020 16:41:15,991 INFO : Inserting KIAA1734_CL38
23 Dec 2020 16:41:16,012 INFO : 65% Done
23 Dec 2020 16:41:16,570 DEBUG: Total peptides inserted: 1
23 Dec 2020 16:41:16,571 INFO : Inserting MAP4_CL38
23 Dec 2020 16:41:16,594 INFO : 66% Done
23 Dec 2020 16:41:17,221 DEBUG: Total peptides inserted: 1
23 Dec 2020 16:41:17,222 INFO : Inserting KIAA0217_CL39
23 Dec 2020 16:41:17,245 INFO : 67% Done
23 Dec 2020 16:41:17,734 DEBUG: Total peptides inserted: 1
23 Dec 2020 16:41:17,734 INFO : Inserting CTG26_CL40
23 Dec 2020 16:41:17,745 INFO : 68% Done
23 Dec 2020 16:41:18,219 DEBUG: Total peptides inserted: 1
23 Dec 2020 16:41:18,219 INFO : Inserting KIAA1991_CL40
23 Dec 2020 16:41:18,234 INFO : 70% Done
23 Dec 2020 16:41:18,912 DEBUG: Total peptides inserted: 1
23 Dec 2020 16:41:18,912 INFO : Inserting DBP2_CL41
23 Dec 2020 16:41:19,300 DEBUG: Total peptides inserted: 1
23 Dec 2020 16:41:19,301 INFO : Inserting SRRM2_CL41
23 Dec 2020 16:41:19,312 INFO : 71% Done
23 Dec 2020 16:41:19,786 DEBUG: Total peptides inserted: 1
23 Dec 2020 16:41:19,787 INFO : Inserting KIAA1321_CL42
23 Dec 2020 16:41:19,797 INFO : 72% Done
23 Dec 2020 16:41:20,201 DEBUG: Total peptides inserted: 1
23 Dec 2020 16:41:20,202 INFO : Inserting MAPKAPK1A_CL43
23 Dec 2020 16:41:20,215 INFO : 74% Done
23 Dec 2020 16:41:21,352 DEBUG: Total peptides inserted: 2
23 Dec 2020 16:41:21,353 INFO : Inserting C22orf9_CL43
23 Dec 2020 16:41:21,365 INFO : 75% Done
23 Dec 2020 16:41:21,881 DEBUG: Total peptides inserted: 1
23 Dec 2020 16:41:21,882 INFO : Inserting KIAA1844_CL44
23 Dec 2020 16:41:21,893 INFO : 76% Done
23 Dec 2020 16:41:22,392 DEBUG: Total peptides inserted: 1
23 Dec 2020 16:41:22,394 INFO : Inserting CCNYL1_CL45
23 Dec 2020 16:41:22,405 INFO : 77% Done
23 Dec 2020 16:41:22,907 DEBUG: Total peptides inserted: 1
23 Dec 2020 16:41:22,908 INFO : Inserting OK/SW-cl.2_CL46
23 Dec 2020 16:41:22,917 INFO : 78% Done
23 Dec 2020 16:41:23,270 DEBUG: Total peptides inserted: 1
23 Dec 2020 16:41:23,271 INFO : Inserting PDK1_CL46
23 Dec 2020 16:41:23,283 INFO : 79% Done
23 Dec 2020 16:41:23,805 DEBUG: Total peptides inserted: 1
23 Dec 2020 16:41:23,805 INFO : Inserting PLEC1_CL47
23 Dec 2020 16:41:23,817 INFO : 80% Done
23 Dec 2020 16:41:24,435 INFO : 81% Done
23 Dec 2020 16:41:24,936 DEBUG: Total peptides inserted: 2
23 Dec 2020 16:41:24,937 INFO : Inserting CASC3_CL48
23 Dec 2020 16:41:24,950 INFO : 82% Done
23 Dec 2020 16:41:25,510 DEBUG: Total peptides inserted: 1
23 Dec 2020 16:41:25,512 INFO : Inserting BAT2D1_CL48
23 Dec 2020 16:41:25,525 INFO : 83% Done
23 Dec 2020 16:41:26,145 DEBUG: Total peptides inserted: 1
23 Dec 2020 16:41:26,145 INFO : Inserting LAP2_CL49
23 Dec 2020 16:41:26,158 INFO : 85% Done
23 Dec 2020 16:41:26,910 DEBUG: Total peptides inserted: 1
23 Dec 2020 16:41:26,911 INFO : Inserting TB7_CL49
23 Dec 2020 16:41:26,938 INFO : 86% Done
23 Dec 2020 16:41:27,652 DEBUG: Total peptides inserted: 1
23 Dec 2020 16:41:27,653 INFO : Inserting IQGAP3_CL50
23 Dec 2020 16:41:27,663 INFO : 87% Done
23 Dec 2020 16:41:28,093 DEBUG: Total peptides inserted: 1
23 Dec 2020 16:41:28,094 INFO : Inserting NFATC2IP_CL50
23 Dec 2020 16:41:28,106 INFO : 88% Done
23 Dec 2020 16:41:28,658 DEBUG: Total peptides inserted: 1
23 Dec 2020 16:41:28,659 INFO : Inserting BAF45D_CL51
23 Dec 2020 16:41:28,670 INFO : 89% Done
23 Dec 2020 16:41:29,138 DEBUG: Total peptides inserted: 1
23 Dec 2020 16:41:29,139 INFO : Inserting PP8000_CL51
23 Dec 2020 16:41:29,152 INFO : 90% Done
23 Dec 2020 16:41:29,697 DEBUG: Total peptides inserted: 1
23 Dec 2020 16:41:29,698 INFO : Inserting HSPC075_CL52
23 Dec 2020 16:41:29,709 INFO : 91% Done
23 Dec 2020 16:41:30,127 DEBUG: Total peptides inserted: 1
23 Dec 2020 16:41:30,128 INFO : Inserting C13orf8_CL52
23 Dec 2020 16:41:30,142 INFO : 93% Done
23 Dec 2020 16:41:30,757 DEBUG: Total peptides inserted: 1
23 Dec 2020 16:41:30,758 INFO : Inserting JUND_CL53
23 Dec 2020 16:41:30,768 INFO : 94% Done
23 Dec 2020 16:41:31,198 DEBUG: Total peptides inserted: 1
23 Dec 2020 16:41:31,199 INFO : Inserting CLTA_CL53
23 Dec 2020 16:41:31,212 INFO : 95% Done
23 Dec 2020 16:41:31,783 DEBUG: Total peptides inserted: 1
23 Dec 2020 16:41:31,784 INFO : Inserting KIAA0035_CL54
23 Dec 2020 16:41:31,798 INFO : 96% Done
23 Dec 2020 16:41:32,405 DEBUG: Total peptides inserted: 1
23 Dec 2020 16:41:32,406 INFO : Inserting AP1GBP1_CL55
23 Dec 2020 16:41:32,419 INFO : 97% Done
23 Dec 2020 16:41:32,980 DEBUG: Total peptides inserted: 1
23 Dec 2020 16:41:32,981 INFO : Inserting CIN85_CL55
23 Dec 2020 16:41:32,991 INFO : 98% Done
23 Dec 2020 16:41:33,469 DEBUG: Total peptides inserted: 1
23 Dec 2020 16:41:33,471 INFO : Done parsing Skyline document.
23 Dec 2020 16:41:33,473 INFO : Creating and populating temp tables for Proportion values
23 Dec 2020 16:41:33,735 INFO : Setting PrecursorModifiedAreaProportion values on precursorchrominfo
23 Dec 2020 16:41:35,572 INFO : Setting ModifiedAreaProportion values on generalmoleculechrominfo
23 Dec 2020 16:41:36,303 INFO : Cleaning up temp tables
23 Dec 2020 16:41:36,725 INFO : Completed import of Skyline document from LINCS_P100_DIA_Plate23_annotated_minimized_2018-05-02_18-13-55.sky.zip
23 Dec 2020 16:41:36,731 INFO : 100% Done
23 Dec 2020 16:41:36,796 INFO : Successfully completed task 'org.labkey.targetedms.pipeline.TargetedMSImportTask'