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Running LINCS pipeline on PSP for: LINCS_P100_DIA_Plate33_annotated_minimized_2018-05-02_17-47-07

P100

Job Status

Created: 2019-08-16 14:25:05
Modified: 2020-06-01 17:20:42
Email: vsharma@uw.edu
Status: COMPLETE
Info:
Description: Running LINCS pipeline on PSP for: LINCS_P100_DIA_Plate33_annotated_minimized_2018-05-02_17-47-07
File Path: /data/labkey/files/LINCS/Publications/Touchstone_2/P100/@files/LincsPSP_LINCS_P100_DIA_Plate33_annotated_minimized_2018-05-02_17-47-07_2019-08-16_14-25-05.log
Files: LincsPSP_LINCS_P100_DIA_Plate33_annotated_minimized_2018-05-02_17-47-07_2019-08-16_14-25-05.log
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Log File


16 Aug 2019 14:25:05,673 INFO : Running LINCS pipeline on PSP for:  LINCS_P100_DIA_Plate33_annotated_minimized_2018-05-02_17-47-07
16 Aug 2019 14:25:05,673 INFO : =======================================
16 Aug 2019 14:29:33,954 INFO : Starting to run task 'org.labkey.lincs.psp.LincsPspTask' at location 'webserver-high-priority'
16 Aug 2019 14:29:33,955 INFO : Running LINCS PSP pipeline for LINCS_P100_DIA_Plate33_annotated_minimized_2018-05-02_17-47-07
16 Aug 2019 14:29:33,955 INFO : Submitting job for runId: 69171, name: LINCS_P100_DIA_Plate33_annotated_minimized_2018-05-02_17-47-07
16 Aug 2019 14:29:33,957 INFO : Looking for existing job with name LINCS_P100_DIA_Plate33_annotated_minimized_2018-05-02_17-47-07_publ
16 Aug 2019 14:29:34,072 INFO : PSP job name: LINCS_P100_DIA_Plate33_annotated_minimized_2018-05-02_17-47-07_publ
16 Aug 2019 14:29:34,073 INFO : Sending JSON:
16 Aug 2019 14:29:34,073 INFO : {
  "level 4": {"panorama": {
    "method": "PUT",
    "url": "https://panoramaweb.org/_webdav/LINCS/Publications/Touchstone_2/P100/%40files/GCT/LINCS_P100_DIA_Plate33_annotated_minimized_2018-05-02_17-47-07_LVL4.gct"
  }},
  "assay": "P100",
  "name": "LINCS_P100_DIA_Plate33_annotated_minimized_2018-05-02_17-47-07_publ",
  "config": {"panorama": {
    "method": "PUT",
    "url": "https://panoramaweb.org/_webdav/LINCS/Publications/Touchstone_2/P100/%40files/GCT/LINCS_P100_DIA_Plate33_annotated_minimized_2018-05-02_17-47-07.cfg"
  }},
  "level 2": {"panorama": {
    "method": "GET",
    "url": "https://panoramaweb.org/lincs/LINCS/Publications/Touchstone_2/P100/runGCTReportApi.view?runId=69171&remote=true&reportName=GCT%20File%20P100"
  }},
  "level 3": {"panorama": {
    "method": "PUT",
    "url": "https://panoramaweb.org/_webdav/LINCS/Publications/Touchstone_2/P100/%40files/GCT/LINCS_P100_DIA_Plate33_annotated_minimized_2018-05-02_17-47-07_LVL3.gct"
  }}
}
16 Aug 2019 14:29:34,074 INFO : Sending POST request to https://api.clue.io/api/psp
16 Aug 2019 14:29:34,256 INFO : Response code - 200
16 Aug 2019 14:29:34,256 INFO : Response from server: {"name":"LINCS_P100_DIA_Plate33_annotated_minimized_2018-05-02_17-47-07_publ","assay":"P100","status":"Waiting_To_Download","id":"5d57203e544166e8be58563e","created":"2019-08-16T21:29:34.142Z","last_modified":"2019-08-16T21:29:34.143Z","level 2":{"panorama":{"method":"GET","url":"https://panoramaweb.org/lincs/LINCS/Publications/Touchstone_2/P100/runGCTReportApi.view?runId=69171&remote=true&reportName=GCT%20File%20P100"}},"level 3":{"panorama":{"method":"PUT","url":"https://panoramaweb.org/_webdav/LINCS/Publications/Touchstone_2/P100/%40files/GCT/LINCS_P100_DIA_Plate33_annotated_minimized_2018-05-02_17-47-07_LVL3.gct"}},"level 4":{"panorama":{"method":"PUT","url":"https://panoramaweb.org/_webdav/LINCS/Publications/Touchstone_2/P100/%40files/GCT/LINCS_P100_DIA_Plate33_annotated_minimized_2018-05-02_17-47-07_LVL4.gct"}},"config":{"panorama":{"method":"PUT","url":"https://panoramaweb.org/_webdav/LINCS/Publications/Touchstone_2/P100/%40files/GCT/LINCS_P100_DIA_Plate33_annotated_minimized_2018-05-02_17-47-07.cfg"}}}
16 Aug 2019 14:29:34,257 INFO : Sent POST request to https://api.clue.io/api/psp
16 Aug 2019 14:29:34,259 INFO : Checking status of job 5d57203e544166e8be58563e
16 Aug 2019 14:29:34,368 INFO : Status: Waiting_To_Download
16 Aug 2019 14:29:54,369 INFO : Checking status of job 5d57203e544166e8be58563e
16 Aug 2019 14:29:54,628 INFO : Status: POUR : succeeded in uploading all GCTs to Panorama
16 Aug 2019 14:29:54,629 INFO : PSP job completed with status: POUR : succeeded in uploading all GCTs to Panorama
16 Aug 2019 14:29:54,629 INFO : Finished running LINCS PSP pipeline.
16 Aug 2019 14:29:54,629 INFO : Successfully completed task 'org.labkey.lincs.psp.LincsPspTask'