Skyline document import - LINCS_GCP_Plate65_annotated_minimized_2019-10-17_15-57-42.sky.zip

GCP_GctMaker

Job Status

Created: 2020-12-23 12:01:06
Modified: 2020-12-23 12:28:15
Email: vsharma@uw.edu
Status: COMPLETE
Info:
Description: Skyline document import - LINCS_GCP_Plate65_annotated_minimized_2019-10-17_15-57-42.sky.zip
File Path: /data/labkey/files/LINCS/Publications/Touchstone_2/GCP_GctMaker/@files/LINCS_GCP_Plate65_annotated_minimized_2019-10-17_15-57-42.sky_2020-12-23_12-01-28.log
Files: LINCS_GCP_Plate65_annotated_minimized_2019-10-17_15-57-42.sky_2020-12-23_12-01-28.log
Completed Runs: LINCS_GCP_Plate65_annotated_minimized_2019-10-17_15-57-42.sky.zip

Log File


23 Dec 2020 12:26:30,764 INFO : Starting to run task 'org.labkey.targetedms.pipeline.TargetedMSImportTask' at location 'webserver-high-priority'
23 Dec 2020 12:26:30,769 INFO : Starting to import Skyline document from LINCS_GCP_Plate65_annotated_minimized_2019-10-17_15-57-42.sky.zip
23 Dec 2020 12:26:30,808 INFO : Expanding LINCS_GCP_Plate65_annotated_minimized.skyd
23 Dec 2020 12:26:32,939 INFO : Expanding LINCS_GCP_Plate65_annotated_minimized.sky.view
23 Dec 2020 12:26:32,949 INFO : Expanding LINCS_GCP_Plate65_annotated_minimized.sky
23 Dec 2020 12:26:33,557 INFO : 1% Done
23 Dec 2020 12:26:35,899 INFO : Inserting H3K4me0 - BI10003
23 Dec 2020 12:26:35,917 INFO : 2% Done
23 Dec 2020 12:26:36,378 INFO : Inserting H3K4me1 - BI10004
23 Dec 2020 12:26:36,850 INFO : Inserting H3K4me2 - BI10005
23 Dec 2020 12:26:36,875 INFO : 3% Done
23 Dec 2020 12:26:37,598 INFO : Inserting H3K4me3 - BI10006
23 Dec 2020 12:26:37,634 INFO : 5% Done
23 Dec 2020 12:26:38,743 INFO : Inserting H3K4ac1 - BI10007
23 Dec 2020 12:26:38,761 INFO : 6% Done
23 Dec 2020 12:26:39,194 INFO : Inserting H3K9me0K14ac0 - BI10008
23 Dec 2020 12:26:39,749 INFO : Inserting H3K9me1K14ac0 - BI10009
23 Dec 2020 12:26:39,768 INFO : 7% Done
23 Dec 2020 12:26:40,317 INFO : Inserting H3K9me2K14ac0 - BI10010
23 Dec 2020 12:26:40,340 INFO : 8% Done
23 Dec 2020 12:26:40,886 INFO : Inserting H3K9me3K14ac0 - BI10011
23 Dec 2020 12:26:40,906 INFO : 9% Done
23 Dec 2020 12:26:41,455 INFO : Inserting H3K9ac1K14ac0 - BI10012
23 Dec 2020 12:26:41,474 INFO : 10% Done
23 Dec 2020 12:26:42,002 INFO : Inserting H3K9me0K14ac1 - BI10013
23 Dec 2020 12:26:42,558 INFO : Inserting H3K9me1K14ac1 - BI10014
23 Dec 2020 12:26:42,579 INFO : 11% Done
23 Dec 2020 12:26:43,130 INFO : Inserting H3K9me2K14ac1 - BI10015
23 Dec 2020 12:26:43,150 INFO : 12% Done
23 Dec 2020 12:26:43,695 INFO : Inserting H3K9me3K14ac1 - BI10016
23 Dec 2020 12:26:43,715 INFO : 13% Done
23 Dec 2020 12:26:44,259 INFO : Inserting H3K9ac1K14ac1 - BI10017
23 Dec 2020 12:26:44,279 INFO : 14% Done
23 Dec 2020 12:26:44,815 INFO : Inserting H3K9me0S10ph1K14ac0 - BI10018
23 Dec 2020 12:26:45,372 INFO : Inserting H3K9me1S10ph1K14ac0 - BI10019
23 Dec 2020 12:26:45,389 INFO : 15% Done
23 Dec 2020 12:26:45,852 INFO : Inserting H3K9me2S10ph1K14ac0 - BI10020
23 Dec 2020 12:26:45,873 INFO : 16% Done
23 Dec 2020 12:26:46,408 INFO : Inserting H3K9me3S10ph1K14ac0 - BI10021
23 Dec 2020 12:26:46,428 INFO : 17% Done
23 Dec 2020 12:26:46,970 INFO : Inserting H3K9ac1S10ph1K14ac0 - BI10022
23 Dec 2020 12:26:47,473 INFO : Inserting H3K9me0S10ph1K14ac1 - BI10023
23 Dec 2020 12:26:47,490 INFO : 18% Done
23 Dec 2020 12:26:47,951 INFO : Inserting H3K9me1S10ph1K14ac1 - BI10024
23 Dec 2020 12:26:48,418 INFO : Inserting H3K9me2S10ph1K14ac1 - BI10025
23 Dec 2020 12:26:48,438 INFO : 19% Done
23 Dec 2020 12:26:48,942 INFO : Inserting H3K9me3S10ph1K14ac1 - BI10026
23 Dec 2020 12:26:48,951 INFO : 20% Done
23 Dec 2020 12:26:49,351 INFO : Inserting H3K9ac1S10ph1K14ac1 - BI10027
23 Dec 2020 12:26:49,740 INFO : Inserting H3K18ac0K23ac0 - BI10028
23 Dec 2020 12:26:49,759 INFO : 21% Done
23 Dec 2020 12:26:50,209 INFO : Inserting H3K18ac1K23ac0 - BI10029
23 Dec 2020 12:26:50,227 INFO : 22% Done
23 Dec 2020 12:26:50,685 INFO : Inserting H3K18ac0K23ac1 - BI10030
23 Dec 2020 12:26:51,152 INFO : Inserting H3K18ac1K23ac1 - BI10031
23 Dec 2020 12:26:51,170 INFO : 23% Done
23 Dec 2020 12:26:51,913 INFO : Inserting H3K18ub1K23ac0 - BI10032
23 Dec 2020 12:26:53,081 INFO : Inserting H3K18ac0K23ub1 - BI10033
23 Dec 2020 12:26:53,099 INFO : 24% Done
23 Dec 2020 12:26:54,030 INFO : Inserting H3K27me0K36me0 - BI10034
23 Dec 2020 12:26:54,059 INFO : 26% Done
23 Dec 2020 12:26:55,664 INFO : Inserting H3K27me0K36me1 - BI10085
23 Dec 2020 12:26:57,062 INFO : Inserting H3K27me0K36me2 - BI10086
23 Dec 2020 12:26:57,088 INFO : 27% Done
23 Dec 2020 12:26:58,124 INFO : Inserting H3K27me0K36me3 - BI10087
23 Dec 2020 12:26:58,146 INFO : 28% Done
23 Dec 2020 12:26:59,239 INFO : Inserting H3K27me1K36me0 - BI10035
23 Dec 2020 12:26:59,268 INFO : 30% Done
23 Dec 2020 12:27:00,782 INFO : Inserting H3K27me1K36me1 - BI10036
23 Dec 2020 12:27:01,785 INFO : Inserting H3K27me1K36me2 - BI10037
23 Dec 2020 12:27:01,808 INFO : 31% Done
23 Dec 2020 12:27:02,774 INFO : Inserting H3K27me1K36me3 - BI10038
23 Dec 2020 12:27:02,795 INFO : 32% Done
23 Dec 2020 12:27:03,760 INFO : Inserting H3K27me2K36me0 - BI10039
23 Dec 2020 12:27:03,779 INFO : 33% Done
23 Dec 2020 12:27:04,602 INFO : Inserting H3K27me2K36me1 - BI10040
23 Dec 2020 12:27:04,622 INFO : 34% Done
23 Dec 2020 12:27:05,448 INFO : Inserting H3K27me2K36me2 - BI10041
23 Dec 2020 12:27:06,905 INFO : Inserting H3K27me2K36me3 - BI10042
23 Dec 2020 12:27:06,922 INFO : 35% Done
23 Dec 2020 12:27:07,867 INFO : Inserting H3K27me3K36me0 - BI10043
23 Dec 2020 12:27:07,887 INFO : 36% Done
23 Dec 2020 12:27:08,798 INFO : Inserting H3K27me3K36me1 - BI10044
23 Dec 2020 12:27:08,821 INFO : 37% Done
23 Dec 2020 12:27:10,003 INFO : Inserting H3K27me3K36me2 - BI10045
23 Dec 2020 12:27:10,024 INFO : 38% Done
23 Dec 2020 12:27:10,982 INFO : Inserting H3K27me3K36me3 - BI10046
23 Dec 2020 12:27:12,130 INFO : Inserting H3K27ac1K36me0 - BI10047
23 Dec 2020 12:27:12,151 INFO : 39% Done
23 Dec 2020 12:27:13,126 INFO : Inserting H3K27ac1K36me1 - BI10048
23 Dec 2020 12:27:13,147 INFO : 40% Done
23 Dec 2020 12:27:14,121 INFO : Inserting H3K27ac1K36me2 - BI10049
23 Dec 2020 12:27:14,142 INFO : 41% Done
23 Dec 2020 12:27:15,196 INFO : Inserting H3K27ac1K36me3 - BI10050
23 Dec 2020 12:27:15,217 INFO : 42% Done
23 Dec 2020 12:27:16,182 INFO : Inserting H3.3K27me0K36me0 - BI10051
23 Dec 2020 12:27:17,004 INFO : Inserting H3NORM(41-49) - BI10052
23 Dec 2020 12:27:17,029 INFO : 44% Done
23 Dec 2020 12:27:18,319 INFO : Inserting H3NORM(41-49) - BI10052p
23 Dec 2020 12:27:18,338 INFO : 45% Done
23 Dec 2020 12:27:19,158 INFO : Inserting H3K56me0 - BI10054
23 Dec 2020 12:27:19,180 INFO : 46% Done
23 Dec 2020 12:27:20,124 INFO : Inserting H3K56me1 - BI10055
23 Dec 2020 12:27:21,137 INFO : Inserting H3K56me2 - BI10056
23 Dec 2020 12:27:21,155 INFO : 47% Done
23 Dec 2020 12:27:21,992 INFO : Inserting H3K56ac1-BI10058
23 Dec 2020 12:27:22,022 INFO : 48% Done
23 Dec 2020 12:27:23,734 INFO : Inserting H3K79me0 - BI10060
23 Dec 2020 12:27:23,757 INFO : 50% Done
23 Dec 2020 12:27:24,828 INFO : Inserting H3K79me1 - BI10061
23 Dec 2020 12:27:25,946 INFO : Inserting H3K79me2 - BI10062
23 Dec 2020 12:27:25,978 INFO : 51% Done
23 Dec 2020 12:27:27,079 INFO : Inserting H4(4to17)ac0me0 - BI10088
23 Dec 2020 12:27:27,117 INFO : 53% Done
23 Dec 2020 12:27:29,105 INFO : Inserting H4(4to17)K5ac1me0_leftpeak - BI10089
23 Dec 2020 12:27:29,131 INFO : 54% Done
23 Dec 2020 12:27:30,357 INFO : Inserting H4(4to17)K12ac1_left peak - BI10091
23 Dec 2020 12:27:30,386 INFO : 56% Done
23 Dec 2020 12:27:32,005 INFO : Inserting H4(4to17)K16ac1me0 - BI10092
23 Dec 2020 12:27:32,026 INFO : 57% Done
23 Dec 2020 12:27:33,012 INFO : Inserting H4(4to17)K16ac0me1 - BI10102
23 Dec 2020 12:27:33,049 INFO : 58% Done
23 Dec 2020 12:27:35,045 INFO : Inserting H4(4to17)K5ac1K8ac1me0_left peak - BI10094
23 Dec 2020 12:27:35,069 INFO : 59% Done
23 Dec 2020 12:27:36,320 INFO : Inserting H4(4to17)K5ac1K16ac1me0_right peak - BI10095
23 Dec 2020 12:27:36,346 INFO : 61% Done
23 Dec 2020 12:27:37,716 INFO : Inserting H4(4to17)K8ac1K12ac1me0_left peak - BI10093
23 Dec 2020 12:27:37,742 INFO : 62% Done
23 Dec 2020 12:27:38,974 INFO : Inserting H4(4to17)K12ac1K16ac1me0 - BI10097
23 Dec 2020 12:27:39,006 INFO : 63% Done
23 Dec 2020 12:27:40,635 INFO : Inserting H4(4to17)K8ac1K12ac1K16ac1me0_right peak - BI10098
23 Dec 2020 12:27:40,661 INFO : 64% Done
23 Dec 2020 12:27:41,959 INFO : Inserting H4(4to17)K5ac1K8ac1K12ac1me0_left peak - BI10099
23 Dec 2020 12:27:42,008 INFO : 66% Done
23 Dec 2020 12:27:44,536 INFO : Inserting H4(4to17)K5ac1K8ac1K16ac1me0_right peak - BI10100
23 Dec 2020 12:27:44,564 INFO : 68% Done
23 Dec 2020 12:27:46,083 INFO : Inserting H4(4to17)K5ac1K8ac1K12ac1K16ac1me0 - BI10101
23 Dec 2020 12:27:46,124 INFO : 70% Done
23 Dec 2020 12:27:48,638 INFO : Inserting H4(68-78)AltNorm - BI10108
23 Dec 2020 12:27:48,682 INFO : 73% Done
23 Dec 2020 12:27:50,881 INFO : Inserting H4(68-78)AltNorm - BI10108p
23 Dec 2020 12:27:50,898 INFO : 74% Done
23 Dec 2020 12:27:51,647 INFO : Inserting H4(20to23)K20me0 - BI10103
23 Dec 2020 12:27:52,961 INFO : Inserting H4(20to23)K20me1 - BI10104
23 Dec 2020 12:27:52,984 INFO : 75% Done
23 Dec 2020 12:27:54,091 INFO : Inserting H4(20to23)K20me2 - BI10105
23 Dec 2020 12:27:54,116 INFO : 77% Done
23 Dec 2020 12:27:55,381 INFO : Inserting H4(20to23)K20me3 - BI10106
23 Dec 2020 12:27:55,404 INFO : 78% Done
23 Dec 2020 12:27:56,501 INFO : Inserting H2A(21to29)NORM - BI10109
23 Dec 2020 12:27:56,544 INFO : 80% Done
23 Dec 2020 12:27:59,062 INFO : Done parsing Skyline document.
23 Dec 2020 12:27:59,105 INFO : No group comparisons found.
23 Dec 2020 12:27:59,106 INFO : Calculating calibration curves
23 Dec 2020 12:27:59,759 INFO : 81% Done
23 Dec 2020 12:28:00,527 INFO : 82% Done
23 Dec 2020 12:28:01,622 INFO : 83% Done
23 Dec 2020 12:28:02,665 INFO : 84% Done
23 Dec 2020 12:28:03,467 INFO : 85% Done
23 Dec 2020 12:28:04,186 INFO : 86% Done
23 Dec 2020 12:28:04,795 INFO : 87% Done
23 Dec 2020 12:28:05,285 INFO : 88% Done
23 Dec 2020 12:28:05,889 INFO : 89% Done
23 Dec 2020 12:28:06,376 INFO : 90% Done
23 Dec 2020 12:28:07,088 INFO : 91% Done
23 Dec 2020 12:28:07,668 INFO : 92% Done
23 Dec 2020 12:28:08,157 INFO : 93% Done
23 Dec 2020 12:28:08,597 INFO : 94% Done
23 Dec 2020 12:28:09,041 INFO : 95% Done
23 Dec 2020 12:28:09,627 INFO : 96% Done
23 Dec 2020 12:28:10,121 INFO : 97% Done
23 Dec 2020 12:28:10,802 INFO : 98% Done
23 Dec 2020 12:28:11,063 INFO : Done calculating calibration curves.
23 Dec 2020 12:28:11,067 INFO : Creating and populating temp tables for Proportion values
23 Dec 2020 12:28:11,445 INFO : Setting PrecursorModifiedAreaProportion values on precursorchrominfo
23 Dec 2020 12:28:14,423 INFO : Setting ModifiedAreaProportion values on generalmoleculechrominfo
23 Dec 2020 12:28:14,936 INFO : Cleaning up temp tables
23 Dec 2020 12:28:15,214 INFO : Completed import of Skyline document from LINCS_GCP_Plate65_annotated_minimized_2019-10-17_15-57-42.sky.zip
23 Dec 2020 12:28:15,219 INFO : 100% Done
23 Dec 2020 12:28:15,319 INFO : Successfully completed task 'org.labkey.targetedms.pipeline.TargetedMSImportTask'