Skyline document import - LINCS_GCP_Plate64_annotated_minimized_2018-04-20_14-41-08.sky.zip

GCP_GctMaker

Job Status

Created: 2020-12-23 12:01:06
Modified: 2020-12-23 12:26:30
Email: vsharma@uw.edu
Status: COMPLETE
Info:
Description: Skyline document import - LINCS_GCP_Plate64_annotated_minimized_2018-04-20_14-41-08.sky.zip
File Path: /data/labkey/files/LINCS/Publications/Touchstone_2/GCP_GctMaker/@files/LINCS_GCP_Plate64_annotated_minimized_2018-04-20_14-41-08.sky_2020-12-23_12-01-27.log
Files: LINCS_GCP_Plate64_annotated_minimized_2018-04-20_14-41-08.sky_2020-12-23_12-01-27.log
Completed Runs: LINCS_GCP_Plate64_annotated_minimized_2018-04-20_14-41-08.sky.zip

Log File


23 Dec 2020 12:24:58,353 INFO : Starting to run task 'org.labkey.targetedms.pipeline.TargetedMSImportTask' at location 'webserver-high-priority'
23 Dec 2020 12:24:58,356 INFO : Starting to import Skyline document from LINCS_GCP_Plate64_annotated_minimized_2018-04-20_14-41-08.sky.zip
23 Dec 2020 12:24:58,395 INFO : Expanding Histone2016.blib
23 Dec 2020 12:24:58,449 INFO : Expanding Histone2016.redundant.blib
23 Dec 2020 12:24:58,487 INFO : Expanding LINCS_GCP_Plate64_annotated_minimized.skyd
23 Dec 2020 12:24:59,896 INFO : Expanding LINCS_GCP_Plate64_annotated_minimized.sky.view
23 Dec 2020 12:24:59,912 INFO : Expanding LINCS_GCP_Plate64_annotated_minimized.sky
23 Dec 2020 12:25:00,342 INFO : 1% Done
23 Dec 2020 12:25:02,653 INFO : Inserting H3K4me0 - BI10003
23 Dec 2020 12:25:02,672 INFO : 2% Done
23 Dec 2020 12:25:03,438 INFO : Inserting H3K4me1 - BI10004
23 Dec 2020 12:25:04,193 INFO : Inserting H3K4me2 - BI10005
23 Dec 2020 12:25:04,217 INFO : 3% Done
23 Dec 2020 12:25:05,357 INFO : Inserting H3K4me3 - BI10006
23 Dec 2020 12:25:05,389 INFO : 5% Done
23 Dec 2020 12:25:07,106 INFO : Inserting H3K4ac1 - BI10007
23 Dec 2020 12:25:07,123 INFO : 6% Done
23 Dec 2020 12:25:07,837 INFO : Inserting H3K9me0K14ac0 - BI10008
23 Dec 2020 12:25:08,754 INFO : Inserting H3K9me1K14ac0 - BI10009
23 Dec 2020 12:25:08,777 INFO : 7% Done
23 Dec 2020 12:25:09,744 INFO : Inserting H3K9me2K14ac0 - BI10010
23 Dec 2020 12:25:09,765 INFO : 8% Done
23 Dec 2020 12:25:10,752 INFO : Inserting H3K9me3K14ac0 - BI10011
23 Dec 2020 12:25:10,772 INFO : 9% Done
23 Dec 2020 12:25:11,793 INFO : Inserting H3K9ac1K14ac0 - BI10012
23 Dec 2020 12:25:11,814 INFO : 10% Done
23 Dec 2020 12:25:12,753 INFO : Inserting H3K9me0K14ac1 - BI10013
23 Dec 2020 12:25:13,658 INFO : Inserting H3K9me1K14ac1 - BI10014
23 Dec 2020 12:25:13,679 INFO : 11% Done
23 Dec 2020 12:25:14,569 INFO : Inserting H3K9me2K14ac1 - BI10015
23 Dec 2020 12:25:14,589 INFO : 12% Done
23 Dec 2020 12:25:15,482 INFO : Inserting H3K9me3K14ac1 - BI10016
23 Dec 2020 12:25:15,502 INFO : 13% Done
23 Dec 2020 12:25:16,395 INFO : Inserting H3K9ac1K14ac1 - BI10017
23 Dec 2020 12:25:16,416 INFO : 14% Done
23 Dec 2020 12:25:17,309 INFO : Inserting H3K9me0S10ph1K14ac0 - BI10018
23 Dec 2020 12:25:18,108 INFO : Inserting H3K9me1S10ph1K14ac0 - BI10019
23 Dec 2020 12:25:18,124 INFO : 15% Done
23 Dec 2020 12:25:18,879 INFO : Inserting H3K9me2S10ph1K14ac0 - BI10020
23 Dec 2020 12:25:18,900 INFO : 16% Done
23 Dec 2020 12:25:19,750 INFO : Inserting H3K9me3S10ph1K14ac0 - BI10021
23 Dec 2020 12:25:19,769 INFO : 17% Done
23 Dec 2020 12:25:20,618 INFO : Inserting H3K9ac1S10ph1K14ac0 - BI10022
23 Dec 2020 12:25:21,190 INFO : Inserting H3K9me0S10ph1K14ac1 - BI10023
23 Dec 2020 12:25:21,208 INFO : 18% Done
23 Dec 2020 12:25:22,022 INFO : Inserting H3K9me1S10ph1K14ac1 - BI10024
23 Dec 2020 12:25:22,798 INFO : Inserting H3K9me2S10ph1K14ac1 - BI10025
23 Dec 2020 12:25:22,817 INFO : 19% Done
23 Dec 2020 12:25:23,640 INFO : Inserting H3K9me3S10ph1K14ac1 - BI10026
23 Dec 2020 12:25:23,658 INFO : 20% Done
23 Dec 2020 12:25:24,520 INFO : Inserting H3K9ac1S10ph1K14ac1 - BI10027
23 Dec 2020 12:25:25,276 INFO : Inserting H3K18ac0K23ac0 - BI10028
23 Dec 2020 12:25:25,294 INFO : 21% Done
23 Dec 2020 12:25:26,045 INFO : Inserting H3K18ac1K23ac0 - BI10029
23 Dec 2020 12:25:26,063 INFO : 22% Done
23 Dec 2020 12:25:26,810 INFO : Inserting H3K18ac0K23ac1 - BI10030
23 Dec 2020 12:25:27,570 INFO : Inserting H3K18ac1K23ac1 - BI10031
23 Dec 2020 12:25:27,588 INFO : 23% Done
23 Dec 2020 12:25:28,335 INFO : Inserting H3K18ub1K23ac0 - BI10032
23 Dec 2020 12:25:28,356 INFO : 24% Done
23 Dec 2020 12:25:29,507 INFO : Inserting H3K18ac0K23ub1 - BI10033
23 Dec 2020 12:25:30,328 INFO : Inserting H3K27me0K36me0 - BI10034
23 Dec 2020 12:25:30,354 INFO : 26% Done
23 Dec 2020 12:25:31,664 INFO : Inserting H3K27me0K36me1 - BI10085
23 Dec 2020 12:25:32,847 INFO : Inserting H3K27me0K36me2 - BI10086
23 Dec 2020 12:25:32,867 INFO : 27% Done
23 Dec 2020 12:25:33,750 INFO : Inserting H3K27me0K36me3 - BI10087
23 Dec 2020 12:25:33,771 INFO : 28% Done
23 Dec 2020 12:25:34,658 INFO : Inserting H3K27me1K36me0 - BI10035
23 Dec 2020 12:25:34,685 INFO : 30% Done
23 Dec 2020 12:25:35,909 INFO : Inserting H3K27me1K36me1 - BI10036
23 Dec 2020 12:25:36,549 INFO : Inserting H3K27me1K36me2 - BI10037
23 Dec 2020 12:25:36,564 INFO : 31% Done
23 Dec 2020 12:25:37,359 INFO : Inserting H3K27me1K36me3 - BI10038
23 Dec 2020 12:25:37,376 INFO : 32% Done
23 Dec 2020 12:25:38,184 INFO : Inserting H3K27me2K36me0 - BI10039
23 Dec 2020 12:25:38,201 INFO : 33% Done
23 Dec 2020 12:25:38,951 INFO : Inserting H3K27me2K36me1 - BI10040
23 Dec 2020 12:25:38,969 INFO : 34% Done
23 Dec 2020 12:25:39,729 INFO : Inserting H3K27me2K36me2 - BI10041
23 Dec 2020 12:25:40,772 INFO : Inserting H3K27me2K36me3 - BI10042
23 Dec 2020 12:25:40,784 INFO : 35% Done
23 Dec 2020 12:25:41,699 INFO : Inserting H3K27me3K36me0 - BI10043
23 Dec 2020 12:25:41,719 INFO : 36% Done
23 Dec 2020 12:25:42,458 INFO : Inserting H3K27me3K36me1 - BI10044
23 Dec 2020 12:25:42,481 INFO : 37% Done
23 Dec 2020 12:25:43,506 INFO : Inserting H3K27me3K36me2 - BI10045
23 Dec 2020 12:25:43,527 INFO : 38% Done
23 Dec 2020 12:25:44,431 INFO : Inserting H3K27me3K36me3 - BI10046
23 Dec 2020 12:25:45,422 INFO : Inserting H3K27ac1K36me0 - BI10047
23 Dec 2020 12:25:45,444 INFO : 39% Done
23 Dec 2020 12:25:46,488 INFO : Inserting H3K27ac1K36me1 - BI10048
23 Dec 2020 12:25:46,509 INFO : 40% Done
23 Dec 2020 12:25:47,399 INFO : Inserting H3K27ac1K36me2 - BI10049
23 Dec 2020 12:25:47,417 INFO : 41% Done
23 Dec 2020 12:25:48,177 INFO : Inserting H3K27ac1K36me3 - BI10050
23 Dec 2020 12:25:48,195 INFO : 42% Done
23 Dec 2020 12:25:48,990 INFO : Inserting H3.3K27me0K36me0 - BI10051
23 Dec 2020 12:25:49,688 INFO : Inserting H3NORM(41-49) - BI10052
23 Dec 2020 12:25:49,711 INFO : 43% Done
23 Dec 2020 12:25:51,375 INFO : Inserting H3NORM(41-49) - BI10052p
23 Dec 2020 12:25:51,393 INFO : 44% Done
23 Dec 2020 12:25:52,149 INFO : Inserting H3K56me0 - BI10054
23 Dec 2020 12:25:52,169 INFO : 45% Done
23 Dec 2020 12:25:53,072 INFO : Inserting H3K56me1 - BI10055
23 Dec 2020 12:25:53,092 INFO : 46% Done
23 Dec 2020 12:25:54,036 INFO : Inserting H3K56me2 - BI10056
23 Dec 2020 12:25:54,815 INFO : Inserting H3K56ac1-BI10058
23 Dec 2020 12:25:54,851 INFO : 48% Done
23 Dec 2020 12:25:56,650 INFO : Inserting H3K79me0 - BI10060
23 Dec 2020 12:25:56,670 INFO : 50% Done
23 Dec 2020 12:25:57,735 INFO : Inserting H3K79me1 - BI10061
23 Dec 2020 12:25:58,769 INFO : Inserting H3K79me2 - BI10062
23 Dec 2020 12:25:58,787 INFO : 51% Done
23 Dec 2020 12:25:59,690 INFO : Inserting H4(4to17)ac0me0 - BI10088
23 Dec 2020 12:25:59,726 INFO : 53% Done
23 Dec 2020 12:26:01,563 INFO : Inserting H4(4to17)K5ac1me0_leftpeak - BI10089
23 Dec 2020 12:26:01,589 INFO : 54% Done
23 Dec 2020 12:26:02,540 INFO : Inserting H4(4to17)K12ac1_left peak - BI10091
23 Dec 2020 12:26:02,555 INFO : 55% Done
23 Dec 2020 12:26:03,195 INFO : Inserting H4(4to17)K16ac1me0 - BI10092
23 Dec 2020 12:26:03,209 INFO : 57% Done
23 Dec 2020 12:26:03,651 INFO : Inserting H4(4to17)K16ac0me1 - BI10102
23 Dec 2020 12:26:03,674 INFO : 58% Done
23 Dec 2020 12:26:06,169 INFO : Inserting H4(4to17)K5ac1K8ac1me0_left peak - BI10094
23 Dec 2020 12:26:06,193 INFO : 60% Done
23 Dec 2020 12:26:07,366 INFO : Inserting H4(4to17)K5ac1K16ac1me0_right peak - BI10095
23 Dec 2020 12:26:07,387 INFO : 61% Done
23 Dec 2020 12:26:08,355 INFO : Inserting H4(4to17)K8ac1K12ac1me0_left peak - BI10093
23 Dec 2020 12:26:08,382 INFO : 62% Done
23 Dec 2020 12:26:09,177 INFO : Inserting H4(4to17)K12ac1K16ac1me0 - BI10097
23 Dec 2020 12:26:09,202 INFO : 63% Done
23 Dec 2020 12:26:09,986 INFO : Inserting H4(4to17)K8ac1K12ac1K16ac1me0_right peak - BI10098
23 Dec 2020 12:26:10,011 INFO : 64% Done
23 Dec 2020 12:26:10,686 INFO : Inserting H4(4to17)K5ac1K8ac1K12ac1me0_left peak - BI10099
23 Dec 2020 12:26:10,730 INFO : 66% Done
23 Dec 2020 12:26:12,011 INFO : Inserting H4(4to17)K5ac1K8ac1K16ac1me0_right peak - BI10100
23 Dec 2020 12:26:12,025 INFO : 68% Done
23 Dec 2020 12:26:12,720 INFO : Inserting H4(4to17)K5ac1K8ac1K12ac1K16ac1me0 - BI10101
23 Dec 2020 12:26:12,740 INFO : 70% Done
23 Dec 2020 12:26:14,144 INFO : Inserting H4(68-78)AltNorm - BI10108
23 Dec 2020 12:26:14,185 INFO : 73% Done
23 Dec 2020 12:26:15,345 INFO : Inserting H4(68-78)AltNorm - BI10108p
23 Dec 2020 12:26:15,365 INFO : 74% Done
23 Dec 2020 12:26:15,798 INFO : Inserting H4(20to23)K20me0 - BI10103
23 Dec 2020 12:26:16,475 INFO : Inserting H4(20to23)K20me1 - BI10104
23 Dec 2020 12:26:16,497 INFO : 76% Done
23 Dec 2020 12:26:17,104 INFO : Inserting H4(20to23)K20me2 - BI10105
23 Dec 2020 12:26:17,130 INFO : 77% Done
23 Dec 2020 12:26:17,810 INFO : Inserting H4(20to23)K20me3 - BI10106
23 Dec 2020 12:26:17,831 INFO : 78% Done
23 Dec 2020 12:26:18,417 INFO : Inserting H2A(21to29)NORM - BI10109
23 Dec 2020 12:26:18,457 INFO : 80% Done
23 Dec 2020 12:26:19,686 INFO : Done parsing Skyline document.
23 Dec 2020 12:26:19,720 INFO : No group comparisons found.
23 Dec 2020 12:26:19,721 INFO : Calculating calibration curves
23 Dec 2020 12:26:20,254 INFO : 81% Done
23 Dec 2020 12:26:20,796 INFO : 82% Done
23 Dec 2020 12:26:21,546 INFO : 83% Done
23 Dec 2020 12:26:22,171 INFO : 84% Done
23 Dec 2020 12:26:22,654 INFO : 85% Done
23 Dec 2020 12:26:23,103 INFO : 86% Done
23 Dec 2020 12:26:23,450 INFO : 87% Done
23 Dec 2020 12:26:23,741 INFO : 88% Done
23 Dec 2020 12:26:24,076 INFO : 89% Done
23 Dec 2020 12:26:24,342 INFO : 90% Done
23 Dec 2020 12:26:24,829 INFO : 91% Done
23 Dec 2020 12:26:25,263 INFO : 92% Done
23 Dec 2020 12:26:25,642 INFO : 93% Done
23 Dec 2020 12:26:25,970 INFO : 94% Done
23 Dec 2020 12:26:26,309 INFO : 95% Done
23 Dec 2020 12:26:26,724 INFO : 96% Done
23 Dec 2020 12:26:27,084 INFO : 97% Done
23 Dec 2020 12:26:27,573 INFO : 98% Done
23 Dec 2020 12:26:27,752 INFO : Done calculating calibration curves.
23 Dec 2020 12:26:27,755 INFO : Creating and populating temp tables for Proportion values
23 Dec 2020 12:26:27,953 INFO : Setting PrecursorModifiedAreaProportion values on precursorchrominfo
23 Dec 2020 12:26:29,861 INFO : Setting ModifiedAreaProportion values on generalmoleculechrominfo
23 Dec 2020 12:26:30,337 INFO : Cleaning up temp tables
23 Dec 2020 12:26:30,679 INFO : Completed import of Skyline document from LINCS_GCP_Plate64_annotated_minimized_2018-04-20_14-41-08.sky.zip
23 Dec 2020 12:26:30,685 INFO : 100% Done
23 Dec 2020 12:26:30,737 INFO : Successfully completed task 'org.labkey.targetedms.pipeline.TargetedMSImportTask'