Skyline document import - LINCS_GCP_Plate61_annotated_minimized_2018-01-10_11-34-56.sky.zip

GCP_GctMaker

Job Status

Created: 2020-12-23 12:01:06
Modified: 2020-12-23 12:21:57
Email: vsharma@uw.edu
Status: COMPLETE
Info:
Description: Skyline document import - LINCS_GCP_Plate61_annotated_minimized_2018-01-10_11-34-56.sky.zip
File Path: /data/labkey/files/LINCS/Publications/Touchstone_2/GCP_GctMaker/@files/LINCS_GCP_Plate61_annotated_minimized_2018-01-10_11-34-56.sky_2020-12-23_12-01-24.log
Files: LINCS_GCP_Plate61_annotated_minimized_2018-01-10_11-34-56.sky_2020-12-23_12-01-24.log
Completed Runs: LINCS_GCP_Plate61_annotated_minimized_2018-01-10_11-34-56.sky.zip

Log File


23 Dec 2020 12:20:32,818 INFO : Starting to run task 'org.labkey.targetedms.pipeline.TargetedMSImportTask' at location 'webserver-high-priority'
23 Dec 2020 12:20:32,823 INFO : Starting to import Skyline document from LINCS_GCP_Plate61_annotated_minimized_2018-01-10_11-34-56.sky.zip
23 Dec 2020 12:20:32,887 INFO : Expanding Histone2016.blib
23 Dec 2020 12:20:32,927 INFO : Expanding Histone2016.redundant.blib
23 Dec 2020 12:20:33,011 INFO : Expanding LINCS_GCP_Plate61_annotated_minimized.skyd
23 Dec 2020 12:20:35,197 INFO : Expanding LINCS_GCP_Plate61_annotated_minimized.sky.view
23 Dec 2020 12:20:35,200 INFO : Expanding LINCS_GCP_Plate61_annotated_minimized.sky
23 Dec 2020 12:20:35,638 INFO : 1% Done
23 Dec 2020 12:20:38,116 INFO : Inserting H3K4me0 - BI10003
23 Dec 2020 12:20:38,126 INFO : 2% Done
23 Dec 2020 12:20:38,636 INFO : Inserting H3K4me1 - BI10004
23 Dec 2020 12:20:39,115 INFO : Inserting H3K4me2 - BI10005
23 Dec 2020 12:20:39,127 INFO : 3% Done
23 Dec 2020 12:20:40,048 INFO : Inserting H3K4me3 - BI10006
23 Dec 2020 12:20:40,066 INFO : 5% Done
23 Dec 2020 12:20:41,377 INFO : Inserting H3K4ac1 - BI10007
23 Dec 2020 12:20:41,387 INFO : 6% Done
23 Dec 2020 12:20:41,883 INFO : Inserting H3K9me0K14ac0 - BI10008
23 Dec 2020 12:20:42,484 INFO : Inserting H3K9me1K14ac0 - BI10009
23 Dec 2020 12:20:42,494 INFO : 8% Done
23 Dec 2020 12:20:43,048 INFO : Inserting H3K9me2K14ac0 - BI10010
23 Dec 2020 12:20:43,059 INFO : 9% Done
23 Dec 2020 12:20:43,788 INFO : Inserting H3K9me3K14ac0 - BI10011
23 Dec 2020 12:20:43,799 INFO : 10% Done
23 Dec 2020 12:20:44,584 INFO : Inserting H3K9ac1K14ac0 - BI10012
23 Dec 2020 12:20:45,278 INFO : Inserting H3K9me0K14ac1 - BI10013
23 Dec 2020 12:20:45,288 INFO : 11% Done
23 Dec 2020 12:20:45,940 INFO : Inserting H3K9me1K14ac1 - BI10014
23 Dec 2020 12:20:45,950 INFO : 12% Done
23 Dec 2020 12:20:46,620 INFO : Inserting H3K9me2K14ac1 - BI10015
23 Dec 2020 12:20:46,631 INFO : 13% Done
23 Dec 2020 12:20:47,223 INFO : Inserting H3K9me3K14ac1 - BI10016
23 Dec 2020 12:20:47,234 INFO : 14% Done
23 Dec 2020 12:20:47,814 INFO : Inserting H3K9ac1K14ac1 - BI10017
23 Dec 2020 12:20:48,389 INFO : Inserting H3K9me0S10ph1K14ac0 - BI10018
23 Dec 2020 12:20:48,399 INFO : 15% Done
23 Dec 2020 12:20:48,859 INFO : Inserting H3K9me1S10ph1K14ac0 - BI10019
23 Dec 2020 12:20:48,869 INFO : 16% Done
23 Dec 2020 12:20:49,329 INFO : Inserting H3K9me2S10ph1K14ac0 - BI10020
23 Dec 2020 12:20:49,340 INFO : 17% Done
23 Dec 2020 12:20:50,109 INFO : Inserting H3K9me3S10ph1K14ac0 - BI10021
23 Dec 2020 12:20:50,120 INFO : 18% Done
23 Dec 2020 12:20:50,907 INFO : Inserting H3K9ac1S10ph1K14ac0 - BI10022
23 Dec 2020 12:20:51,622 INFO : Inserting H3K9me0S10ph1K14ac1 - BI10023
23 Dec 2020 12:20:51,632 INFO : 19% Done
23 Dec 2020 12:20:52,361 INFO : Inserting H3K9me1S10ph1K14ac1 - BI10024
23 Dec 2020 12:20:53,056 INFO : 20% Done
23 Dec 2020 12:20:53,057 INFO : Inserting H3K9me2S10ph1K14ac1 - BI10025
23 Dec 2020 12:20:53,715 INFO : Inserting H3K9me3S10ph1K14ac1 - BI10026
23 Dec 2020 12:20:53,726 INFO : 21% Done
23 Dec 2020 12:20:54,510 INFO : Inserting H3K9ac1S10ph1K14ac1 - BI10027
23 Dec 2020 12:20:54,520 INFO : 22% Done
23 Dec 2020 12:20:55,357 INFO : Inserting H3K18ac0K23ac0 - BI10028
23 Dec 2020 12:20:55,956 INFO : Inserting H3K18ac1K23ac0 - BI10029
23 Dec 2020 12:20:55,966 INFO : 23% Done
23 Dec 2020 12:20:56,652 INFO : Inserting H3K18ac0K23ac1 - BI10030
23 Dec 2020 12:20:56,662 INFO : 24% Done
23 Dec 2020 12:20:57,316 INFO : Inserting H3K18ac1K23ac1 - BI10031
23 Dec 2020 12:20:57,326 INFO : 25% Done
23 Dec 2020 12:20:57,919 INFO : Inserting H3K18ub1K23ac0 - BI10032
23 Dec 2020 12:20:57,930 INFO : 26% Done
23 Dec 2020 12:20:58,637 INFO : Inserting H3K18ac0K23ub1 - BI10033
23 Dec 2020 12:20:59,417 INFO : Inserting H3K27me0K36me0 - BI10034
23 Dec 2020 12:20:59,431 INFO : 28% Done
23 Dec 2020 12:21:00,435 INFO : Inserting H3K27me0K36me1 - BI10085
23 Dec 2020 12:21:00,448 INFO : 29% Done
23 Dec 2020 12:21:01,255 INFO : Inserting H3K27me0K36me2 - BI10086
23 Dec 2020 12:21:01,267 INFO : 30% Done
23 Dec 2020 12:21:02,098 INFO : Inserting H3K27me0K36me3 - BI10087
23 Dec 2020 12:21:02,820 INFO : Inserting H3K27me1K36me0 - BI10035
23 Dec 2020 12:21:02,834 INFO : 32% Done
23 Dec 2020 12:21:03,912 INFO : Inserting H3K27me1K36me1 - BI10036
23 Dec 2020 12:21:03,925 INFO : 33% Done
23 Dec 2020 12:21:04,566 INFO : Inserting H3K27me1K36me2 - BI10037
23 Dec 2020 12:21:04,578 INFO : 34% Done
23 Dec 2020 12:21:05,406 INFO : Inserting H3K27me1K36me3 - BI10038
23 Dec 2020 12:21:06,135 INFO : Inserting H3K27me2K36me0 - BI10039
23 Dec 2020 12:21:06,146 INFO : 35% Done
23 Dec 2020 12:21:06,794 INFO : Inserting H3K27me2K36me1 - BI10040
23 Dec 2020 12:21:06,805 INFO : 36% Done
23 Dec 2020 12:21:07,844 INFO : Inserting H3K27me2K36me2 - BI10041
23 Dec 2020 12:21:07,858 INFO : 37% Done
23 Dec 2020 12:21:08,901 INFO : Inserting H3K27me2K36me3 - BI10042
23 Dec 2020 12:21:08,912 INFO : 38% Done
23 Dec 2020 12:21:09,585 INFO : Inserting H3K27me3K36me0 - BI10043
23 Dec 2020 12:21:10,269 INFO : Inserting H3K27me3K36me1 - BI10044
23 Dec 2020 12:21:10,282 INFO : 39% Done
23 Dec 2020 12:21:11,198 INFO : Inserting H3K27me3K36me2 - BI10045
23 Dec 2020 12:21:11,209 INFO : 40% Done
23 Dec 2020 12:21:12,065 INFO : Inserting H3K27me3K36me3 - BI10046
23 Dec 2020 12:21:12,076 INFO : 41% Done
23 Dec 2020 12:21:12,856 INFO : Inserting H3K27ac1K36me0 - BI10047
23 Dec 2020 12:21:12,868 INFO : 42% Done
23 Dec 2020 12:21:13,730 INFO : Inserting H3K27ac1K36me1 - BI10048
23 Dec 2020 12:21:13,741 INFO : 43% Done
23 Dec 2020 12:21:14,552 INFO : Inserting H3K27ac1K36me2 - BI10049
23 Dec 2020 12:21:14,562 INFO : 44% Done
23 Dec 2020 12:21:15,261 INFO : Inserting H3K27ac1K36me3 - BI10050
23 Dec 2020 12:21:15,272 INFO : 45% Done
23 Dec 2020 12:21:15,928 INFO : Inserting H3.3K27me0K36me0 - BI10051
23 Dec 2020 12:21:16,607 INFO : Inserting H3NORM(41-49) - BI10052
23 Dec 2020 12:21:16,621 INFO : 46% Done
23 Dec 2020 12:21:17,555 INFO : Inserting H3NORM(41-49) - BI10052p
23 Dec 2020 12:21:17,565 INFO : 47% Done
23 Dec 2020 12:21:18,088 INFO : Inserting H3K56me0 - BI10054
23 Dec 2020 12:21:18,099 INFO : 48% Done
23 Dec 2020 12:21:18,661 INFO : Inserting H3K56me1 - BI10055
23 Dec 2020 12:21:18,672 INFO : 49% Done
23 Dec 2020 12:21:19,422 INFO : Inserting H3K56me2 - BI10056
23 Dec 2020 12:21:19,432 INFO : 50% Done
23 Dec 2020 12:21:20,150 INFO : Inserting H3K56ac1-BI10058
23 Dec 2020 12:21:20,885 INFO : Inserting H3K79me0 - BI10060
23 Dec 2020 12:21:20,898 INFO : 51% Done
23 Dec 2020 12:21:21,852 INFO : Inserting H3K79me1 - BI10061
23 Dec 2020 12:21:21,865 INFO : 52% Done
23 Dec 2020 12:21:22,712 INFO : Inserting H3K79me2 - BI10062
23 Dec 2020 12:21:22,723 INFO : 53% Done
23 Dec 2020 12:21:23,495 INFO : Inserting H4(4to17)ac0me0 - BI10088
23 Dec 2020 12:21:23,511 INFO : 54% Done
23 Dec 2020 12:21:24,599 INFO : Inserting H4(4to17)K5ac1me0_leftpeak - BI10089
23 Dec 2020 12:21:24,613 INFO : 56% Done
23 Dec 2020 12:21:25,379 INFO : Inserting H4(4to17)K12ac1_left peak - BI10091
23 Dec 2020 12:21:25,395 INFO : 58% Done
23 Dec 2020 12:21:26,552 INFO : Inserting H4(4to17)K16ac1me0 - BI10092
23 Dec 2020 12:21:27,417 INFO : Inserting H4(4to17)K16ac0me1 - BI10102
23 Dec 2020 12:21:27,435 INFO : 60% Done
23 Dec 2020 12:21:29,335 INFO : Inserting H4(4to17)K5ac1K8ac1me0_left peak - BI10094
23 Dec 2020 12:21:29,349 INFO : 62% Done
23 Dec 2020 12:21:30,464 INFO : Inserting H4(4to17)K5ac1K16ac1me0_right peak - BI10095
23 Dec 2020 12:21:31,292 INFO : Inserting H4(4to17)K8ac1K12ac1me0_left peak - BI10093
23 Dec 2020 12:21:31,307 INFO : 63% Done
23 Dec 2020 12:21:32,378 INFO : Inserting H4(4to17)K12ac1K16ac1me0 - BI10097
23 Dec 2020 12:21:32,395 INFO : 65% Done
23 Dec 2020 12:21:33,571 INFO : Inserting H4(4to17)K8ac1K12ac1K16ac1me0_right peak - BI10098
23 Dec 2020 12:21:33,585 INFO : 66% Done
23 Dec 2020 12:21:34,417 INFO : Inserting H4(4to17)K5ac1K8ac1K12ac1me0_left peak - BI10099
23 Dec 2020 12:21:34,443 INFO : 68% Done
23 Dec 2020 12:21:35,977 INFO : Inserting H4(4to17)K5ac1K8ac1K16ac1me0_right peak - BI10100
23 Dec 2020 12:21:35,993 INFO : 69% Done
23 Dec 2020 12:21:37,150 INFO : Inserting H4(4to17)K5ac1K8ac1K12ac1K16ac1me0 - BI10101
23 Dec 2020 12:21:37,168 INFO : 70% Done
23 Dec 2020 12:21:38,600 INFO : Inserting H4(68-78)AltNorm - BI10108
23 Dec 2020 12:21:38,618 INFO : 73% Done
23 Dec 2020 12:21:40,086 INFO : Inserting H4(68-78)AltNorm - BI10108p
23 Dec 2020 12:21:40,099 INFO : 74% Done
23 Dec 2020 12:21:40,725 INFO : Inserting H4(20to23)K20me0 - BI10103
23 Dec 2020 12:21:41,762 INFO : Inserting H4(20to23)K20me1 - BI10104
23 Dec 2020 12:21:41,774 INFO : 76% Done
23 Dec 2020 12:21:42,612 INFO : Inserting H4(20to23)K20me2 - BI10105
23 Dec 2020 12:21:42,626 INFO : 77% Done
23 Dec 2020 12:21:43,644 INFO : Inserting H4(20to23)K20me3 - BI10106
23 Dec 2020 12:21:43,656 INFO : 78% Done
23 Dec 2020 12:21:44,571 INFO : Inserting H2A(21to29)NORM - BI10109
23 Dec 2020 12:21:44,592 INFO : 80% Done
23 Dec 2020 12:21:46,396 INFO : Done parsing Skyline document.
23 Dec 2020 12:21:46,417 INFO : No group comparisons found.
23 Dec 2020 12:21:46,418 INFO : Calculating calibration curves
23 Dec 2020 12:21:46,735 INFO : 81% Done
23 Dec 2020 12:21:47,070 INFO : 82% Done
23 Dec 2020 12:21:47,547 INFO : 83% Done
23 Dec 2020 12:21:48,098 INFO : 84% Done
23 Dec 2020 12:21:48,518 INFO : 85% Done
23 Dec 2020 12:21:48,929 INFO : 86% Done
23 Dec 2020 12:21:49,305 INFO : 87% Done
23 Dec 2020 12:21:49,592 INFO : 88% Done
23 Dec 2020 12:21:49,959 INFO : 89% Done
23 Dec 2020 12:21:50,257 INFO : 90% Done
23 Dec 2020 12:21:50,700 INFO : 91% Done
23 Dec 2020 12:21:51,043 INFO : 92% Done
23 Dec 2020 12:21:51,357 INFO : 93% Done
23 Dec 2020 12:21:51,611 INFO : 94% Done
23 Dec 2020 12:21:51,942 INFO : 95% Done
23 Dec 2020 12:21:52,324 INFO : 96% Done
23 Dec 2020 12:21:52,670 INFO : 97% Done
23 Dec 2020 12:21:53,067 INFO : 98% Done
23 Dec 2020 12:21:53,238 INFO : Done calculating calibration curves.
23 Dec 2020 12:21:53,240 INFO : Creating and populating temp tables for Proportion values
23 Dec 2020 12:21:53,667 INFO : Setting PrecursorModifiedAreaProportion values on precursorchrominfo
23 Dec 2020 12:21:56,242 INFO : Setting ModifiedAreaProportion values on generalmoleculechrominfo
23 Dec 2020 12:21:56,751 INFO : Cleaning up temp tables
23 Dec 2020 12:21:57,064 INFO : Completed import of Skyline document from LINCS_GCP_Plate61_annotated_minimized_2018-01-10_11-34-56.sky.zip
23 Dec 2020 12:21:57,071 INFO : 100% Done
23 Dec 2020 12:21:57,142 INFO : Successfully completed task 'org.labkey.targetedms.pipeline.TargetedMSImportTask'