Skyline document import - LINCS_GCP_Plate58_annotated_minimized_2018-01-02_14-26-56.sky.zip

GCP_GctMaker

Job Status

Created: 2020-12-23 12:01:06
Modified: 2020-12-23 12:17:40
Email: vsharma@uw.edu
Status: COMPLETE
Info:
Description: Skyline document import - LINCS_GCP_Plate58_annotated_minimized_2018-01-02_14-26-56.sky.zip
File Path: /data/labkey/files/LINCS/Publications/Touchstone_2/GCP_GctMaker/@files/LINCS_GCP_Plate58_annotated_minimized_2018-01-02_14-26-56.sky_2020-12-23_12-01-21.log
Files: LINCS_GCP_Plate58_annotated_minimized_2018-01-02_14-26-56.sky_2020-12-23_12-01-21.log
Completed Runs: LINCS_GCP_Plate58_annotated_minimized_2018-01-02_14-26-56.sky.zip

Log File


23 Dec 2020 12:16:10,098 INFO : Starting to run task 'org.labkey.targetedms.pipeline.TargetedMSImportTask' at location 'webserver-high-priority'
23 Dec 2020 12:16:10,112 INFO : Starting to import Skyline document from LINCS_GCP_Plate58_annotated_minimized_2018-01-02_14-26-56.sky.zip
23 Dec 2020 12:16:10,141 INFO : Expanding Histone2016.blib
23 Dec 2020 12:16:10,222 INFO : Expanding Histone2016.redundant.blib
23 Dec 2020 12:16:10,283 INFO : Expanding LINCS_GCP_Plate58_annotated_minimized.skyd
23 Dec 2020 12:16:12,376 INFO : Expanding LINCS_GCP_Plate58_annotated_minimized.sky.view
23 Dec 2020 12:16:12,394 INFO : Expanding LINCS_GCP_Plate58_annotated_minimized.sky
23 Dec 2020 12:16:12,875 INFO : 1% Done
23 Dec 2020 12:16:14,613 INFO : Inserting H3K4me0 - BI10003
23 Dec 2020 12:16:15,051 INFO : Inserting H3K4me1 - BI10004
23 Dec 2020 12:16:15,060 INFO : 2% Done
23 Dec 2020 12:16:15,414 INFO : Inserting H3K4me2 - BI10005
23 Dec 2020 12:16:15,426 INFO : 3% Done
23 Dec 2020 12:16:15,993 INFO : Inserting H3K4me3 - BI10006
23 Dec 2020 12:16:16,010 INFO : 5% Done
23 Dec 2020 12:16:16,842 INFO : Inserting H3K4ac1 - BI10007
23 Dec 2020 12:16:16,851 INFO : 6% Done
23 Dec 2020 12:16:17,194 INFO : Inserting H3K9me0K14ac0 - BI10008
23 Dec 2020 12:16:17,621 INFO : Inserting H3K9me1K14ac0 - BI10009
23 Dec 2020 12:16:17,631 INFO : 7% Done
23 Dec 2020 12:16:18,039 INFO : Inserting H3K9me2K14ac0 - BI10010
23 Dec 2020 12:16:18,049 INFO : 8% Done
23 Dec 2020 12:16:18,466 INFO : Inserting H3K9me3K14ac0 - BI10011
23 Dec 2020 12:16:18,476 INFO : 9% Done
23 Dec 2020 12:16:18,902 INFO : Inserting H3K9ac1K14ac0 - BI10012
23 Dec 2020 12:16:19,251 INFO : Inserting H3K9me0K14ac1 - BI10013
23 Dec 2020 12:16:19,261 INFO : 10% Done
23 Dec 2020 12:16:19,672 INFO : Inserting H3K9me1K14ac1 - BI10014
23 Dec 2020 12:16:20,094 INFO : Inserting H3K9me2K14ac1 - BI10015
23 Dec 2020 12:16:20,104 INFO : 11% Done
23 Dec 2020 12:16:20,558 INFO : Inserting H3K9me3K14ac1 - BI10016
23 Dec 2020 12:16:20,569 INFO : 12% Done
23 Dec 2020 12:16:20,989 INFO : Inserting H3K9ac1K14ac1 - BI10017
23 Dec 2020 12:16:20,999 INFO : 13% Done
23 Dec 2020 12:16:21,450 INFO : Inserting H3K9me0S10ph1K14ac0 - BI10018
23 Dec 2020 12:16:21,459 INFO : 14% Done
23 Dec 2020 12:16:21,835 INFO : Inserting H3K9me1S10ph1K14ac0 - BI10019
23 Dec 2020 12:16:22,212 INFO : Inserting H3K9me2S10ph1K14ac0 - BI10020
23 Dec 2020 12:16:22,223 INFO : 15% Done
23 Dec 2020 12:16:22,720 INFO : Inserting H3K9me3S10ph1K14ac0 - BI10021
23 Dec 2020 12:16:22,730 INFO : 16% Done
23 Dec 2020 12:16:23,177 INFO : Inserting H3K9ac1S10ph1K14ac0 - BI10022
23 Dec 2020 12:16:23,188 INFO : 17% Done
23 Dec 2020 12:16:23,634 INFO : Inserting H3K9me0S10ph1K14ac1 - BI10023
23 Dec 2020 12:16:24,015 INFO : Inserting H3K9me1S10ph1K14ac1 - BI10024
23 Dec 2020 12:16:24,025 INFO : 18% Done
23 Dec 2020 12:16:24,417 INFO : Inserting H3K9me2S10ph1K14ac1 - BI10025
23 Dec 2020 12:16:24,861 INFO : Inserting H3K9me3S10ph1K14ac1 - BI10026
23 Dec 2020 12:16:24,871 INFO : 19% Done
23 Dec 2020 12:16:25,306 INFO : Inserting H3K9ac1S10ph1K14ac1 - BI10027
23 Dec 2020 12:16:25,316 INFO : 20% Done
23 Dec 2020 12:16:25,760 INFO : Inserting H3K18ac0K23ac0 - BI10028
23 Dec 2020 12:16:25,770 INFO : 21% Done
23 Dec 2020 12:16:26,158 INFO : Inserting H3K18ac1K23ac0 - BI10029
23 Dec 2020 12:16:26,168 INFO : 22% Done
23 Dec 2020 12:16:26,508 INFO : Inserting H3K18ac0K23ac1 - BI10030
23 Dec 2020 12:16:26,868 INFO : Inserting H3K18ac1K23ac1 - BI10031
23 Dec 2020 12:16:27,252 INFO : Inserting H3K18ub1K23ac0 - BI10032
23 Dec 2020 12:16:27,262 INFO : 23% Done
23 Dec 2020 12:16:27,903 INFO : Inserting H3K18ac0K23ub1 - BI10033
23 Dec 2020 12:16:27,913 INFO : 24% Done
23 Dec 2020 12:16:28,390 INFO : Inserting H3K27me0K36me0 - BI10034
23 Dec 2020 12:16:28,403 INFO : 25% Done
23 Dec 2020 12:16:28,953 INFO : Inserting H3K27me0K36me1 - BI10085
23 Dec 2020 12:16:28,965 INFO : 26% Done
23 Dec 2020 12:16:29,460 INFO : Inserting H3K27me0K36me2 - BI10086
23 Dec 2020 12:16:29,902 INFO : Inserting H3K27me0K36me3 - BI10087
23 Dec 2020 12:16:29,913 INFO : 27% Done
23 Dec 2020 12:16:30,375 INFO : Inserting H3K27me1K36me0 - BI10035
23 Dec 2020 12:16:30,389 INFO : 29% Done
23 Dec 2020 12:16:31,221 INFO : Inserting H3K27me1K36me1 - BI10036
23 Dec 2020 12:16:31,232 INFO : 30% Done
23 Dec 2020 12:16:32,053 INFO : Inserting H3K27me1K36me2 - BI10037
23 Dec 2020 12:16:33,721 INFO : Inserting H3K27me1K36me3 - BI10038
23 Dec 2020 12:16:33,738 INFO : 31% Done
23 Dec 2020 12:16:34,732 INFO : Inserting H3K27me2K36me0 - BI10039
23 Dec 2020 12:16:34,743 INFO : 32% Done
23 Dec 2020 12:16:36,205 INFO : Inserting H3K27me2K36me1 - BI10040
23 Dec 2020 12:16:36,909 INFO : Inserting H3K27me2K36me2 - BI10041
23 Dec 2020 12:16:36,922 INFO : 34% Done
23 Dec 2020 12:16:38,044 INFO : Inserting H3K27me2K36me3 - BI10042
23 Dec 2020 12:16:38,771 INFO : Inserting H3K27me3K36me0 - BI10043
23 Dec 2020 12:16:39,642 INFO : Inserting H3K27me3K36me1 - BI10044
23 Dec 2020 12:16:39,662 INFO : 36% Done
23 Dec 2020 12:16:40,846 INFO : Inserting H3K27me3K36me2 - BI10045
23 Dec 2020 12:16:41,962 INFO : Inserting H3K27me3K36me3 - BI10046
23 Dec 2020 12:16:41,977 INFO : 38% Done
23 Dec 2020 12:16:43,480 INFO : Inserting H3K27ac1K36me0 - BI10047
23 Dec 2020 12:16:44,412 INFO : Inserting H3K27ac1K36me1 - BI10048
23 Dec 2020 12:16:44,423 INFO : 39% Done
23 Dec 2020 12:16:45,148 INFO : Inserting H3K27ac1K36me2 - BI10049
23 Dec 2020 12:16:45,158 INFO : 40% Done
23 Dec 2020 12:16:45,915 INFO : Inserting H3K27ac1K36me3 - BI10050
23 Dec 2020 12:16:45,926 INFO : 41% Done
23 Dec 2020 12:16:46,665 INFO : Inserting H3.3K27me0K36me0 - BI10051
23 Dec 2020 12:16:46,685 INFO : 42% Done
23 Dec 2020 12:16:47,379 INFO : Inserting H3NORM(41-49) - BI10052
23 Dec 2020 12:16:48,424 INFO : Inserting H3NORM(41-49) - BI10052p
23 Dec 2020 12:16:48,435 INFO : 43% Done
23 Dec 2020 12:16:49,246 INFO : Inserting H3K56me0 - BI10054
23 Dec 2020 12:16:49,259 INFO : 44% Done
23 Dec 2020 12:16:50,104 INFO : Inserting H3K56me1 - BI10055
23 Dec 2020 12:16:50,115 INFO : 45% Done
23 Dec 2020 12:16:50,917 INFO : Inserting H3K56me2 - BI10056
23 Dec 2020 12:16:50,928 INFO : 46% Done
23 Dec 2020 12:16:51,689 INFO : Inserting H3K56ac1-BI10058
23 Dec 2020 12:16:51,759 INFO : 49% Done
23 Dec 2020 12:16:54,752 INFO : Inserting H3K79me0 - BI10060
23 Dec 2020 12:16:54,764 INFO : 50% Done
23 Dec 2020 12:16:55,639 INFO : Inserting H3K79me1 - BI10061
23 Dec 2020 12:16:55,652 INFO : 51% Done
23 Dec 2020 12:16:56,476 INFO : Inserting H3K79me2 - BI10062
23 Dec 2020 12:16:56,487 INFO : 52% Done
23 Dec 2020 12:16:57,189 INFO : Inserting H4(4to17)ac0me0 - BI10088
23 Dec 2020 12:16:57,207 INFO : 54% Done
23 Dec 2020 12:16:59,177 INFO : Inserting H4(4to17)K5ac1me0_leftpeak - BI10089
23 Dec 2020 12:17:00,398 INFO : Inserting H4(4to17)K12ac1_left peak - BI10091
23 Dec 2020 12:17:00,415 INFO : 56% Done
23 Dec 2020 12:17:02,061 INFO : Inserting H4(4to17)K16ac1me0 - BI10092
23 Dec 2020 12:17:02,074 INFO : 57% Done
23 Dec 2020 12:17:03,940 INFO : Inserting H4(4to17)K16ac0me1 - BI10102
23 Dec 2020 12:17:03,963 INFO : 59% Done
23 Dec 2020 12:17:07,240 INFO : Inserting H4(4to17)K5ac1K8ac1me0_left peak - BI10094
23 Dec 2020 12:17:07,256 INFO : 60% Done
23 Dec 2020 12:17:08,295 INFO : Inserting H4(4to17)K5ac1K16ac1me0_right peak - BI10095
23 Dec 2020 12:17:08,310 INFO : 61% Done
23 Dec 2020 12:17:09,519 INFO : Inserting H4(4to17)K8ac1K12ac1me0_left peak - BI10093
23 Dec 2020 12:17:09,823 INFO : 62% Done
23 Dec 2020 12:17:10,857 INFO : Inserting H4(4to17)K12ac1K16ac1me0 - BI10097
23 Dec 2020 12:17:10,873 INFO : 63% Done
23 Dec 2020 12:17:12,509 INFO : Inserting H4(4to17)K8ac1K12ac1K16ac1me0_right peak - BI10098
23 Dec 2020 12:17:12,523 INFO : 65% Done
23 Dec 2020 12:17:13,607 INFO : Inserting H4(4to17)K5ac1K8ac1K12ac1me0_left peak - BI10099
23 Dec 2020 12:17:13,635 INFO : 67% Done
23 Dec 2020 12:17:17,032 INFO : Inserting H4(4to17)K5ac1K8ac1K16ac1me0_right peak - BI10100
23 Dec 2020 12:17:17,049 INFO : 69% Done
23 Dec 2020 12:17:18,775 INFO : Inserting H4(4to17)K5ac1K8ac1K12ac1K16ac1me0 - BI10101
23 Dec 2020 12:17:18,800 INFO : 71% Done
23 Dec 2020 12:17:20,720 INFO : Inserting H4(68-78)AltNorm - BI10108
23 Dec 2020 12:17:20,741 INFO : 74% Done
23 Dec 2020 12:17:23,026 INFO : Inserting H4(68-78)AltNorm - BI10108p
23 Dec 2020 12:17:23,701 INFO : Inserting H4(20to23)K20me0 - BI10103
23 Dec 2020 12:17:23,713 INFO : 75% Done
23 Dec 2020 12:17:24,796 INFO : Inserting H4(20to23)K20me1 - BI10104
23 Dec 2020 12:17:24,807 INFO : 76% Done
23 Dec 2020 12:17:25,674 INFO : Inserting H4(20to23)K20me2 - BI10105
23 Dec 2020 12:17:25,687 INFO : 77% Done
23 Dec 2020 12:17:26,676 INFO : Inserting H4(20to23)K20me3 - BI10106
23 Dec 2020 12:17:26,689 INFO : 78% Done
23 Dec 2020 12:17:27,470 INFO : Inserting H2A(21to29)NORM - BI10109
23 Dec 2020 12:17:27,490 INFO : 80% Done
23 Dec 2020 12:17:29,352 INFO : Done parsing Skyline document.
23 Dec 2020 12:17:29,411 INFO : No group comparisons found.
23 Dec 2020 12:17:29,412 INFO : Calculating calibration curves
23 Dec 2020 12:17:29,743 INFO : 81% Done
23 Dec 2020 12:17:30,139 INFO : 82% Done
23 Dec 2020 12:17:30,821 INFO : 83% Done
23 Dec 2020 12:17:31,452 INFO : 84% Done
23 Dec 2020 12:17:31,948 INFO : 85% Done
23 Dec 2020 12:17:32,560 INFO : 86% Done
23 Dec 2020 12:17:32,929 INFO : 87% Done
23 Dec 2020 12:17:33,225 INFO : 88% Done
23 Dec 2020 12:17:33,633 INFO : 89% Done
23 Dec 2020 12:17:33,972 INFO : 90% Done
23 Dec 2020 12:17:34,382 INFO : 91% Done
23 Dec 2020 12:17:34,703 INFO : 92% Done
23 Dec 2020 12:17:35,021 INFO : 93% Done
23 Dec 2020 12:17:35,289 INFO : 94% Done
23 Dec 2020 12:17:35,630 INFO : 95% Done
23 Dec 2020 12:17:35,999 INFO : 96% Done
23 Dec 2020 12:17:36,283 INFO : 97% Done
23 Dec 2020 12:17:36,704 INFO : 98% Done
23 Dec 2020 12:17:36,917 INFO : Done calculating calibration curves.
23 Dec 2020 12:17:36,920 INFO : Creating and populating temp tables for Proportion values
23 Dec 2020 12:17:37,330 INFO : Setting PrecursorModifiedAreaProportion values on precursorchrominfo
23 Dec 2020 12:17:40,102 INFO : Setting ModifiedAreaProportion values on generalmoleculechrominfo
23 Dec 2020 12:17:40,610 INFO : Cleaning up temp tables
23 Dec 2020 12:17:40,861 INFO : Completed import of Skyline document from LINCS_GCP_Plate58_annotated_minimized_2018-01-02_14-26-56.sky.zip
23 Dec 2020 12:17:40,865 INFO : 100% Done
23 Dec 2020 12:17:40,901 INFO : Successfully completed task 'org.labkey.targetedms.pipeline.TargetedMSImportTask'