Skyline document import - LINCS_GCP_Plate66_annotated_minimized_2018-09-05_11-44-04.sky.zip

GCP

Job Status

Created: 2019-06-27 14:12:41
Modified: 2020-06-01 17:07:59
Email: karen@broadinstitute.org
Status: COMPLETE
Info:
Description: Skyline document import - LINCS_GCP_Plate66_annotated_minimized_2018-09-05_11-44-04.sky.zip
File Path: /data/labkey/files/LINCS/Publications/Touchstone_2/GCP/@files/LINCS_GCP_Plate66_annotated_minimized_2018-09-05_11-44-04.sky_2019-06-27_14-13-24.log
Files: LINCS_GCP_Plate66_annotated_minimized_2018-09-05_11-44-04.sky_2019-06-27_14-13-24.log
Completed Runs: LINCS_GCP_Plate66_annotated_minimized_2018-09-05_11-44-04.sky.zip

Log File


27 Jun 2019 14:54:46,667 INFO : Starting to run task 'org.labkey.targetedms.pipeline.TargetedMSImportTask' at location 'webserver-high-priority'
27 Jun 2019 14:54:48,647 INFO : Created temp file because input is from cloud: s3://s3.amazonaws.com/mc-panoramaweb/container5511/LINCS_GCP_Plate66_annotated_minimized_2018-09-05_11-44-04.sky.zip
27 Jun 2019 14:54:48,651 INFO : Starting to import Skyline document from LINCS_GCP_Plate66_annotated_minimized_2018-09-05_11-44-04.sky.zip
27 Jun 2019 14:54:48,652 INFO : Expanding Histone_2016_updated.blib
27 Jun 2019 14:54:48,657 INFO : Expanding Histone_2016_updated.redundant.blib
27 Jun 2019 14:54:48,661 INFO : Expanding LINCS_GCP_Plate66_annotated_minimized.skyd
27 Jun 2019 14:54:49,560 INFO : Expanding LINCS_GCP_Plate66_annotated_minimized.sky.view
27 Jun 2019 14:54:49,561 INFO : Expanding LINCS_GCP_Plate66_annotated_minimized.sky
27 Jun 2019 14:54:49,689 WARN : The version of this Skyline document is 4.12. This is newer than the highest supported version 4.1
27 Jun 2019 14:54:51,603 INFO : Inserting H3K4me0 - BI10003
27 Jun 2019 14:54:52,369 INFO : Total peptides inserted: 1
27 Jun 2019 14:54:52,369 INFO : Inserting H3K4me1 - BI10004
27 Jun 2019 14:54:53,249 INFO : Total peptides inserted: 1
27 Jun 2019 14:54:53,250 INFO : Inserting H3K4me2 - BI10005
27 Jun 2019 14:54:54,765 INFO : Total peptides inserted: 1
27 Jun 2019 14:54:54,766 INFO : Inserting H3K4me3 - BI10006
27 Jun 2019 14:54:56,967 INFO : Total peptides inserted: 1
27 Jun 2019 14:54:56,968 INFO : Inserting H3K4ac1 - BI10007
27 Jun 2019 14:54:57,671 INFO : Total peptides inserted: 1
27 Jun 2019 14:54:57,672 INFO : Inserting H3K9me0K14ac0 - BI10008
27 Jun 2019 14:54:58,734 INFO : Total peptides inserted: 1
27 Jun 2019 14:54:58,734 INFO : Inserting H3K9me1K14ac0 - BI10009
27 Jun 2019 14:54:59,668 INFO : Total peptides inserted: 1
27 Jun 2019 14:54:59,668 INFO : Inserting H3K9me2K14ac0 - BI10010
27 Jun 2019 14:55:00,592 INFO : Total peptides inserted: 1
27 Jun 2019 14:55:00,592 INFO : Inserting H3K9me3K14ac0 - BI10011
27 Jun 2019 14:55:01,537 INFO : Total peptides inserted: 1
27 Jun 2019 14:55:01,538 INFO : Inserting H3K9ac1K14ac0 - BI10012
27 Jun 2019 14:55:02,472 INFO : Total peptides inserted: 1
27 Jun 2019 14:55:02,472 INFO : Inserting H3K9me0K14ac1 - BI10013
27 Jun 2019 14:55:03,403 INFO : Total peptides inserted: 1
27 Jun 2019 14:55:03,403 INFO : Inserting H3K9me1K14ac1 - BI10014
27 Jun 2019 14:55:04,373 INFO : Total peptides inserted: 1
27 Jun 2019 14:55:04,374 INFO : Inserting H3K9me2K14ac1 - BI10015
27 Jun 2019 14:55:05,319 INFO : Total peptides inserted: 1
27 Jun 2019 14:55:05,320 INFO : Inserting H3K9me3K14ac1 - BI10016
27 Jun 2019 14:55:06,283 INFO : Total peptides inserted: 1
27 Jun 2019 14:55:06,284 INFO : Inserting H3K9ac1K14ac1 - BI10017
27 Jun 2019 14:55:07,248 INFO : Total peptides inserted: 1
27 Jun 2019 14:55:07,249 INFO : Inserting H3K9me0S10ph1K14ac0 - BI10018
27 Jun 2019 14:55:08,017 INFO : Total peptides inserted: 1
27 Jun 2019 14:55:08,018 INFO : Inserting H3K9me1S10ph1K14ac0 - BI10019
27 Jun 2019 14:55:08,723 INFO : Total peptides inserted: 1
27 Jun 2019 14:55:08,723 INFO : Inserting H3K9me2S10ph1K14ac0 - BI10020
27 Jun 2019 14:55:09,618 INFO : Total peptides inserted: 1
27 Jun 2019 14:55:09,618 INFO : Inserting H3K9me3S10ph1K14ac0 - BI10021
27 Jun 2019 14:55:10,482 INFO : Total peptides inserted: 1
27 Jun 2019 14:55:10,483 INFO : Inserting H3K9ac1S10ph1K14ac0 - BI10022
27 Jun 2019 14:55:11,092 INFO : Total peptides inserted: 1
27 Jun 2019 14:55:11,092 INFO : Inserting H3K9me0S10ph1K14ac1 - BI10023
27 Jun 2019 14:55:12,021 INFO : Total peptides inserted: 1
27 Jun 2019 14:55:12,021 INFO : Inserting H3K9me1S10ph1K14ac1 - BI10024
27 Jun 2019 14:55:12,983 INFO : Total peptides inserted: 1
27 Jun 2019 14:55:12,983 INFO : Inserting H3K9me2S10ph1K14ac1 - BI10025
27 Jun 2019 14:55:13,870 INFO : Total peptides inserted: 1
27 Jun 2019 14:55:13,870 INFO : Inserting H3K9me3S10ph1K14ac1 - BI10026
27 Jun 2019 14:55:14,818 INFO : Total peptides inserted: 1
27 Jun 2019 14:55:14,818 INFO : Inserting H3K9ac1S10ph1K14ac1 - BI10027
27 Jun 2019 14:55:15,483 INFO : Total peptides inserted: 1
27 Jun 2019 14:55:15,483 INFO : Inserting H3K18ac0K23ac0 - BI10028
27 Jun 2019 14:55:16,378 INFO : Total peptides inserted: 1
27 Jun 2019 14:55:16,379 INFO : Inserting H3K18ac1K23ac0 - BI10029
27 Jun 2019 14:55:17,242 INFO : Total peptides inserted: 1
27 Jun 2019 14:55:17,243 INFO : Inserting H3K18ac0K23ac1 - BI10030
27 Jun 2019 14:55:18,116 INFO : Total peptides inserted: 1
27 Jun 2019 14:55:18,116 INFO : Inserting H3K18ac1K23ac1 - BI10031
27 Jun 2019 14:55:18,972 INFO : Total peptides inserted: 1
27 Jun 2019 14:55:18,972 INFO : Inserting H3K18ub1K23ac0 - BI10032
27 Jun 2019 14:55:20,196 INFO : Total peptides inserted: 1
27 Jun 2019 14:55:20,197 INFO : Inserting H3K18ac0K23ub1 - BI10033
27 Jun 2019 14:55:21,185 INFO : Total peptides inserted: 1
27 Jun 2019 14:55:21,186 INFO : Inserting H3K27me0K36me0 - BI10034
27 Jun 2019 14:55:22,836 INFO : Total peptides inserted: 1
27 Jun 2019 14:55:22,837 INFO : Inserting H3K27me0K36me1 - BI10085
27 Jun 2019 14:55:24,226 INFO : Total peptides inserted: 1
27 Jun 2019 14:55:24,226 INFO : Inserting H3K27me0K36me2 - BI10086
27 Jun 2019 14:55:25,270 INFO : Total peptides inserted: 1
27 Jun 2019 14:55:25,270 INFO : Inserting H3K27me0K36me3 - BI10087
27 Jun 2019 14:55:26,322 INFO : Total peptides inserted: 1
27 Jun 2019 14:55:26,322 INFO : Inserting H3K27me1K36me0 - BI10035
27 Jun 2019 14:55:27,881 INFO : Total peptides inserted: 1
27 Jun 2019 14:55:27,882 INFO : Inserting H3K27me1K36me1 - BI10036
27 Jun 2019 14:55:28,901 INFO : Total peptides inserted: 1
27 Jun 2019 14:55:28,901 INFO : Inserting H3K27me1K36me2 - BI10037
27 Jun 2019 14:55:29,975 INFO : Total peptides inserted: 1
27 Jun 2019 14:55:29,976 INFO : Inserting H3K27me1K36me3 - BI10038
27 Jun 2019 14:55:30,932 INFO : Total peptides inserted: 1
27 Jun 2019 14:55:30,933 INFO : Inserting H3K27me2K36me0 - BI10039
27 Jun 2019 14:55:31,728 INFO : Total peptides inserted: 1
27 Jun 2019 14:55:31,729 INFO : Inserting H3K27me2K36me1 - BI10040
27 Jun 2019 14:55:32,550 INFO : Total peptides inserted: 1
27 Jun 2019 14:55:32,551 INFO : Inserting H3K27me2K36me2 - BI10041
27 Jun 2019 14:55:33,792 INFO : Total peptides inserted: 1
27 Jun 2019 14:55:33,792 INFO : Inserting H3K27me2K36me3 - BI10042
27 Jun 2019 14:55:34,434 INFO : Total peptides inserted: 1
27 Jun 2019 14:55:34,434 INFO : Inserting H3K27me3K36me0 - BI10043
27 Jun 2019 14:55:35,282 INFO : Total peptides inserted: 1
27 Jun 2019 14:55:35,283 INFO : Inserting H3K27me3K36me1 - BI10044
27 Jun 2019 14:55:36,471 INFO : Total peptides inserted: 1
27 Jun 2019 14:55:36,472 INFO : Inserting H3K27me3K36me2 - BI10045
27 Jun 2019 14:55:37,396 INFO : Total peptides inserted: 1
27 Jun 2019 14:55:37,397 INFO : Inserting H3K27me3K36me3 - BI10046
27 Jun 2019 14:55:38,955 INFO : Total peptides inserted: 1
27 Jun 2019 14:55:38,955 INFO : Inserting H3K27ac1K36me0 - BI10047
27 Jun 2019 14:55:40,081 INFO : Total peptides inserted: 1
27 Jun 2019 14:55:40,082 INFO : Inserting H3K27ac1K36me1 - BI10048
27 Jun 2019 14:55:41,029 INFO : Total peptides inserted: 1
27 Jun 2019 14:55:41,030 INFO : Inserting H3K27ac1K36me2 - BI10049
27 Jun 2019 14:55:41,956 INFO : Total peptides inserted: 1
27 Jun 2019 14:55:41,957 INFO : Inserting H3K27ac1K36me3 - BI10050
27 Jun 2019 14:55:42,902 INFO : Total peptides inserted: 1
27 Jun 2019 14:55:42,902 INFO : Inserting H3.3K27me0K36me0 - BI10051
27 Jun 2019 14:55:43,683 INFO : Total peptides inserted: 1
27 Jun 2019 14:55:43,684 INFO : Inserting H3NORM(41-49) - BI10052
27 Jun 2019 14:55:44,941 INFO : Total peptides inserted: 1
27 Jun 2019 14:55:44,942 INFO : Inserting H3NORM(41-49) - BI10052p
27 Jun 2019 14:55:45,796 INFO : Total peptides inserted: 1
27 Jun 2019 14:55:45,797 INFO : Inserting H3K56me0 - BI10054
27 Jun 2019 14:55:46,855 INFO : Total peptides inserted: 1
27 Jun 2019 14:55:46,856 INFO : Inserting H3K56me1 - BI10055
27 Jun 2019 14:55:47,871 INFO : Total peptides inserted: 1
27 Jun 2019 14:55:47,871 INFO : Inserting H3K56me2 - BI10056
27 Jun 2019 14:55:48,929 INFO : Total peptides inserted: 1
27 Jun 2019 14:55:48,933 INFO : Inserting H3K56ac1-BI10058
27 Jun 2019 14:55:50,754 INFO : Total peptides inserted: 1
27 Jun 2019 14:55:50,754 INFO : Inserting H3K79me0 - BI10060
27 Jun 2019 14:55:51,932 INFO : Total peptides inserted: 1
27 Jun 2019 14:55:51,933 INFO : Inserting H3K79me1 - BI10061
27 Jun 2019 14:55:53,120 INFO : Total peptides inserted: 1
27 Jun 2019 14:55:53,121 INFO : Inserting H3K79me2 - BI10062
27 Jun 2019 14:55:54,049 INFO : Total peptides inserted: 1
27 Jun 2019 14:55:54,049 INFO : Inserting H4(4to17)ac0me0 - BI10088
27 Jun 2019 14:55:55,964 INFO : Total peptides inserted: 1
27 Jun 2019 14:55:55,964 INFO : Inserting H4(4to17)K5ac1me0_leftpeak - BI10089
27 Jun 2019 14:55:57,193 INFO : Total peptides inserted: 1
27 Jun 2019 14:55:57,193 INFO : Inserting H4(4to17)K12ac1_left peak - BI10091
27 Jun 2019 14:55:58,679 INFO : Total peptides inserted: 1
27 Jun 2019 14:55:58,679 INFO : Inserting H4(4to17)K16ac1me0 - BI10092
27 Jun 2019 14:55:59,578 INFO : Total peptides inserted: 1
27 Jun 2019 14:55:59,578 INFO : Inserting H4(4to17)K16ac0me1 - BI10102
27 Jun 2019 14:56:01,962 INFO : Total peptides inserted: 1
27 Jun 2019 14:56:01,963 INFO : Inserting H4(4to17)K5ac1K8ac1me0_left peak - BI10094
27 Jun 2019 14:56:03,187 INFO : Total peptides inserted: 1
27 Jun 2019 14:56:03,188 INFO : Inserting H4(4to17)K5ac1K16ac1me0_right peak - BI10095
27 Jun 2019 14:56:04,373 INFO : Total peptides inserted: 1
27 Jun 2019 14:56:04,373 INFO : Inserting H4(4to17)K8ac1K12ac1me0_left peak - BI10093
27 Jun 2019 14:56:05,661 INFO : Total peptides inserted: 1
27 Jun 2019 14:56:05,661 INFO : Inserting H4(4to17)K12ac1K16ac1me0 - BI10097
27 Jun 2019 14:56:07,140 INFO : Total peptides inserted: 1
27 Jun 2019 14:56:07,141 INFO : Inserting H4(4to17)K8ac1K12ac1K16ac1me0_right peak - BI10098
27 Jun 2019 14:56:08,307 INFO : Total peptides inserted: 1
27 Jun 2019 14:56:08,307 INFO : Inserting H4(4to17)K5ac1K8ac1K12ac1me0_left peak - BI10099
27 Jun 2019 14:56:10,400 INFO : Total peptides inserted: 1
27 Jun 2019 14:56:10,401 INFO : Inserting H4(4to17)K5ac1K8ac1K16ac1me0_right peak - BI10100
27 Jun 2019 14:56:11,910 INFO : Total peptides inserted: 1
27 Jun 2019 14:56:11,910 INFO : Inserting H4(4to17)K5ac1K8ac1K12ac1K16ac1me0 - BI10101
27 Jun 2019 14:56:14,455 INFO : Total peptides inserted: 1
27 Jun 2019 14:56:14,456 INFO : Inserting H4(68-78)AltNorm - BI10108
27 Jun 2019 14:56:16,632 INFO : Total peptides inserted: 1
27 Jun 2019 14:56:16,633 INFO : Inserting H4(68-78)AltNorm - BI10108p
27 Jun 2019 14:56:17,425 INFO : Total peptides inserted: 1
27 Jun 2019 14:56:17,425 INFO : Inserting H4(20to23)K20me0 - BI10103
27 Jun 2019 14:56:18,668 INFO : Total peptides inserted: 1
27 Jun 2019 14:56:18,668 INFO : Inserting H4(20to23)K20me1 - BI10104
27 Jun 2019 14:56:19,735 INFO : Total peptides inserted: 1
27 Jun 2019 14:56:19,736 INFO : Inserting H4(20to23)K20me2 - BI10105
27 Jun 2019 14:56:21,011 INFO : Total peptides inserted: 1
27 Jun 2019 14:56:21,011 INFO : Inserting H4(20to23)K20me3 - BI10106
27 Jun 2019 14:56:22,006 INFO : Total peptides inserted: 1
27 Jun 2019 14:56:22,007 INFO : Inserting H2A(21to29)NORM - BI10109
27 Jun 2019 14:56:24,529 INFO : Total peptides inserted: 1
27 Jun 2019 14:56:36,603 INFO : Copied LINCS_GCP_Plate66_annotated_minimized.skyd to cloud storage.
27 Jun 2019 14:56:36,788 INFO : Copied Histone_2016_updated.blib to cloud storage.
27 Jun 2019 14:56:36,957 INFO : Copied Histone_2016_updated.redundant.blib to cloud storage.
27 Jun 2019 14:56:39,012 INFO : Completed import of Skyline document from LINCS_GCP_Plate66_annotated_minimized_2018-09-05_11-44-04.sky.zip
27 Jun 2019 14:56:39,091 INFO : Successfully completed task 'org.labkey.targetedms.pipeline.TargetedMSImportTask'