Skyline document import - LINCS_GCP_Plate63_annotated_minimized_2018-12-05_11-54-32.sky.zip

GCP

Job Status

Created: 2019-06-27 14:12:40
Modified: 2020-06-01 17:07:59
Email: karen@broadinstitute.org
Status: COMPLETE
Info:
Description: Skyline document import - LINCS_GCP_Plate63_annotated_minimized_2018-12-05_11-54-32.sky.zip
File Path: /data/labkey/files/LINCS/Publications/Touchstone_2/GCP/@files/LINCS_GCP_Plate63_annotated_minimized_2018-12-05_11-54-32.sky_2019-06-27_14-13-18.log
Files: LINCS_GCP_Plate63_annotated_minimized_2018-12-05_11-54-32.sky_2019-06-27_14-13-18.log

Log File


27 Jun 2019 14:49:07,783 INFO : Starting to run task 'org.labkey.targetedms.pipeline.TargetedMSImportTask' at location 'webserver-high-priority'
27 Jun 2019 14:49:12,416 INFO : Created temp file because input is from cloud: s3://s3.amazonaws.com/mc-panoramaweb/container5511/LINCS_GCP_Plate63_annotated_minimized_2018-12-05_11-54-32.sky.zip
27 Jun 2019 14:49:12,419 INFO : Starting to import Skyline document from LINCS_GCP_Plate63_annotated_minimized_2018-12-05_11-54-32.sky.zip
27 Jun 2019 14:49:12,420 INFO : Expanding Histone_2016_updated.blib
27 Jun 2019 14:49:12,425 INFO : Expanding Histone_2016_updated.redundant.blib
27 Jun 2019 14:49:12,429 INFO : Expanding LINCS_GCP_Plate63_annotated_minimized.skyd
27 Jun 2019 14:49:13,476 INFO : Expanding LINCS_GCP_Plate63_annotated_minimized.sky.view
27 Jun 2019 14:49:13,476 INFO : Expanding LINCS_GCP_Plate63_annotated_minimized.sky
27 Jun 2019 14:49:13,614 WARN : The version of this Skyline document is 4.2. This is newer than the highest supported version 4.1
27 Jun 2019 14:49:16,430 INFO : Inserting H3K4me0 - BI10003
27 Jun 2019 14:49:17,241 INFO : Total peptides inserted: 1
27 Jun 2019 14:49:17,242 INFO : Inserting H3K4me1 - BI10004
27 Jun 2019 14:49:18,029 INFO : Total peptides inserted: 1
27 Jun 2019 14:49:18,030 INFO : Inserting H3K4me2 - BI10005
27 Jun 2019 14:49:19,365 INFO : Total peptides inserted: 1
27 Jun 2019 14:49:19,366 INFO : Inserting H3K4me3 - BI10006
27 Jun 2019 14:49:21,378 INFO : Total peptides inserted: 1
27 Jun 2019 14:49:21,378 INFO : Inserting H3K4ac1 - BI10007
27 Jun 2019 14:49:22,132 INFO : Total peptides inserted: 1
27 Jun 2019 14:49:22,133 INFO : Inserting H3K9me0K14ac0 - BI10008
27 Jun 2019 14:49:23,065 INFO : Total peptides inserted: 1
27 Jun 2019 14:49:23,065 INFO : Inserting H3K9me1K14ac0 - BI10009
27 Jun 2019 14:49:23,975 INFO : Total peptides inserted: 1
27 Jun 2019 14:49:23,976 INFO : Inserting H3K9me2K14ac0 - BI10010
27 Jun 2019 14:49:24,942 INFO : Total peptides inserted: 1
27 Jun 2019 14:49:24,943 INFO : Inserting H3K9me3K14ac0 - BI10011
27 Jun 2019 14:49:25,701 INFO : Total peptides inserted: 1
27 Jun 2019 14:49:25,701 INFO : Inserting H3K9ac1K14ac0 - BI10012
27 Jun 2019 14:49:26,607 INFO : Total peptides inserted: 1
27 Jun 2019 14:49:26,608 INFO : Inserting H3K9me0K14ac1 - BI10013
27 Jun 2019 14:49:27,521 INFO : Total peptides inserted: 1
27 Jun 2019 14:49:27,522 INFO : Inserting H3K9me1K14ac1 - BI10014
27 Jun 2019 14:49:28,449 INFO : Total peptides inserted: 1
27 Jun 2019 14:49:28,450 INFO : Inserting H3K9me2K14ac1 - BI10015
27 Jun 2019 14:49:29,374 INFO : Total peptides inserted: 1
27 Jun 2019 14:49:29,374 INFO : Inserting H3K9me3K14ac1 - BI10016
27 Jun 2019 14:49:30,301 INFO : Total peptides inserted: 1
27 Jun 2019 14:49:30,301 INFO : Inserting H3K9ac1K14ac1 - BI10017
27 Jun 2019 14:49:31,198 INFO : Total peptides inserted: 1
27 Jun 2019 14:49:31,199 INFO : Inserting H3K9me0S10ph1K14ac0 - BI10018
27 Jun 2019 14:49:31,949 INFO : Total peptides inserted: 1
27 Jun 2019 14:49:31,950 INFO : Inserting H3K9me1S10ph1K14ac0 - BI10019
27 Jun 2019 14:49:32,720 INFO : Total peptides inserted: 1
27 Jun 2019 14:49:32,720 INFO : Inserting H3K9me2S10ph1K14ac0 - BI10020
27 Jun 2019 14:49:33,842 INFO : Total peptides inserted: 1
27 Jun 2019 14:49:33,842 INFO : Inserting H3K9me3S10ph1K14ac0 - BI10021
27 Jun 2019 14:49:34,607 INFO : Total peptides inserted: 1
27 Jun 2019 14:49:34,608 INFO : Inserting H3K9ac1S10ph1K14ac0 - BI10022
27 Jun 2019 14:49:35,393 INFO : Total peptides inserted: 1
27 Jun 2019 14:49:35,394 INFO : Inserting H3K9me0S10ph1K14ac1 - BI10023
27 Jun 2019 14:49:36,174 INFO : Total peptides inserted: 1
27 Jun 2019 14:49:36,174 INFO : Inserting H3K9me1S10ph1K14ac1 - BI10024
27 Jun 2019 14:49:36,975 INFO : Total peptides inserted: 1
27 Jun 2019 14:49:36,975 INFO : Inserting H3K9me2S10ph1K14ac1 - BI10025
27 Jun 2019 14:49:37,938 INFO : Total peptides inserted: 1
27 Jun 2019 14:49:37,938 INFO : Inserting H3K9me3S10ph1K14ac1 - BI10026
27 Jun 2019 14:49:39,114 INFO : Total peptides inserted: 1
27 Jun 2019 14:49:39,114 INFO : Inserting H3K9ac1S10ph1K14ac1 - BI10027
27 Jun 2019 14:49:40,051 INFO : Total peptides inserted: 1
27 Jun 2019 14:49:40,051 INFO : Inserting H3K18ac0K23ac0 - BI10028
27 Jun 2019 14:49:40,860 INFO : Total peptides inserted: 1
27 Jun 2019 14:49:40,861 INFO : Inserting H3K18ac1K23ac0 - BI10029
27 Jun 2019 14:49:41,642 INFO : Total peptides inserted: 1
27 Jun 2019 14:49:41,642 INFO : Inserting H3K18ac0K23ac1 - BI10030
27 Jun 2019 14:49:42,429 INFO : Total peptides inserted: 1
27 Jun 2019 14:49:42,429 INFO : Inserting H3K18ac1K23ac1 - BI10031
27 Jun 2019 14:49:43,229 INFO : Total peptides inserted: 1
27 Jun 2019 14:49:43,229 INFO : Inserting H3K18ub1K23ac0 - BI10032
27 Jun 2019 14:49:44,157 INFO : Total peptides inserted: 1
27 Jun 2019 14:49:44,157 INFO : Inserting H3K18ac0K23ub1 - BI10033
27 Jun 2019 14:49:44,936 INFO : Total peptides inserted: 1
27 Jun 2019 14:49:44,936 INFO : Inserting H3K27me0K36me0 - BI10034
27 Jun 2019 14:49:46,289 INFO : Total peptides inserted: 1
27 Jun 2019 14:49:46,289 INFO : Inserting H3K27me0K36me1 - BI10085
27 Jun 2019 14:49:47,509 INFO : Total peptides inserted: 1
27 Jun 2019 14:49:47,509 INFO : Inserting H3K27me0K36me2 - BI10086
27 Jun 2019 14:49:48,555 INFO : Total peptides inserted: 1
27 Jun 2019 14:49:48,556 INFO : Inserting H3K27me0K36me3 - BI10087
27 Jun 2019 14:49:49,609 INFO : Total peptides inserted: 1
27 Jun 2019 14:49:49,609 INFO : Inserting H3K27me1K36me0 - BI10035
27 Jun 2019 14:49:51,211 INFO : Total peptides inserted: 1
27 Jun 2019 14:49:51,211 INFO : Inserting H3K27me1K36me1 - BI10036
27 Jun 2019 14:49:52,235 INFO : Total peptides inserted: 1
27 Jun 2019 14:49:52,236 INFO : Inserting H3K27me1K36me2 - BI10037
27 Jun 2019 14:49:53,288 INFO : Total peptides inserted: 1
27 Jun 2019 14:49:53,289 INFO : Inserting H3K27me1K36me3 - BI10038
27 Jun 2019 14:49:54,315 INFO : Total peptides inserted: 1
27 Jun 2019 14:49:54,316 INFO : Inserting H3K27me2K36me0 - BI10039
27 Jun 2019 14:49:55,115 INFO : Total peptides inserted: 1
27 Jun 2019 14:49:55,115 INFO : Inserting H3K27me2K36me1 - BI10040
27 Jun 2019 14:49:55,913 INFO : Total peptides inserted: 1
27 Jun 2019 14:49:55,914 INFO : Inserting H3K27me2K36me2 - BI10041
27 Jun 2019 14:49:57,156 INFO : Total peptides inserted: 1
27 Jun 2019 14:49:57,157 INFO : Inserting H3K27me2K36me3 - BI10042
27 Jun 2019 14:49:58,783 INFO : Total peptides inserted: 1
27 Jun 2019 14:49:58,783 INFO : Inserting H3K27me3K36me0 - BI10043
27 Jun 2019 14:49:59,574 INFO : Total peptides inserted: 1
27 Jun 2019 14:49:59,574 INFO : Inserting H3K27me3K36me1 - BI10044
27 Jun 2019 14:50:00,681 INFO : Total peptides inserted: 1
27 Jun 2019 14:50:00,681 INFO : Inserting H3K27me3K36me2 - BI10045
27 Jun 2019 14:50:01,605 INFO : Total peptides inserted: 1
27 Jun 2019 14:50:01,606 INFO : Inserting H3K27me3K36me3 - BI10046
27 Jun 2019 14:50:03,141 INFO : Total peptides inserted: 1
27 Jun 2019 14:50:03,142 INFO : Inserting H3K27ac1K36me0 - BI10047
27 Jun 2019 14:50:04,077 INFO : Total peptides inserted: 1
27 Jun 2019 14:50:04,077 INFO : Inserting H3K27ac1K36me1 - BI10048
27 Jun 2019 14:50:05,011 INFO : Total peptides inserted: 1
27 Jun 2019 14:50:05,012 INFO : Inserting H3K27ac1K36me2 - BI10049
27 Jun 2019 14:50:05,947 INFO : Total peptides inserted: 1
27 Jun 2019 14:50:05,947 INFO : Inserting H3K27ac1K36me3 - BI10050
27 Jun 2019 14:50:06,860 INFO : Total peptides inserted: 1
27 Jun 2019 14:50:06,861 INFO : Inserting H3.3K27me0K36me0 - BI10051
27 Jun 2019 14:50:07,551 INFO : Total peptides inserted: 1
27 Jun 2019 14:50:07,551 INFO : Inserting H3NORM(41-49) - BI10052
27 Jun 2019 14:50:08,571 INFO : Total peptides inserted: 1
27 Jun 2019 14:50:08,571 INFO : Inserting H3NORM(41-49) - BI10052p
27 Jun 2019 14:50:09,426 INFO : Total peptides inserted: 1
27 Jun 2019 14:50:09,426 INFO : Inserting H3K56me0 - BI10054
27 Jun 2019 14:50:10,410 INFO : Total peptides inserted: 1
27 Jun 2019 14:50:10,410 INFO : Inserting H3K56me1 - BI10055
27 Jun 2019 14:50:11,419 INFO : Total peptides inserted: 1
27 Jun 2019 14:50:11,419 INFO : Inserting H3K56me2 - BI10056
27 Jun 2019 14:50:12,206 INFO : Total peptides inserted: 1
27 Jun 2019 14:50:12,209 INFO : Inserting H3K56ac1-BI10058
27 Jun 2019 14:50:15,077 INFO : Total peptides inserted: 1
27 Jun 2019 14:50:15,077 INFO : Inserting H3K79me0 - BI10060
27 Jun 2019 14:50:16,115 INFO : Total peptides inserted: 1
27 Jun 2019 14:50:16,116 INFO : Inserting H3K79me1 - BI10061
27 Jun 2019 14:50:17,442 INFO : Total peptides inserted: 1
27 Jun 2019 14:50:17,442 INFO : Inserting H3K79me2 - BI10062
27 Jun 2019 14:50:18,512 INFO : Total peptides inserted: 1
27 Jun 2019 14:50:18,513 INFO : Inserting H4(4to17)ac0me0 - BI10088
27 Jun 2019 14:50:20,636 INFO : Total peptides inserted: 1
27 Jun 2019 14:50:20,637 INFO : Inserting H4(4to17)K5ac1me0_leftpeak - BI10089
27 Jun 2019 14:50:21,845 INFO : Total peptides inserted: 1
27 Jun 2019 14:50:21,845 INFO : Inserting H4(4to17)K12ac1_left peak - BI10091
27 Jun 2019 14:50:23,398 INFO : Total peptides inserted: 1
27 Jun 2019 14:50:23,398 INFO : Inserting H4(4to17)K16ac1me0 - BI10092
27 Jun 2019 14:50:24,337 INFO : Total peptides inserted: 1
27 Jun 2019 14:50:24,338 INFO : Inserting H4(4to17)K16ac0me1 - BI10102
27 Jun 2019 14:50:26,810 INFO : Total peptides inserted: 1
27 Jun 2019 14:50:26,810 INFO : Inserting H4(4to17)K5ac1K8ac1me0_left peak - BI10094
27 Jun 2019 14:50:27,848 INFO : Total peptides inserted: 1
27 Jun 2019 14:50:27,849 INFO : Inserting H4(4to17)K5ac1K16ac1me0_right peak - BI10095
27 Jun 2019 14:50:29,076 INFO : Total peptides inserted: 1
27 Jun 2019 14:50:29,076 INFO : Inserting H4(4to17)K8ac1K12ac1me0_left peak - BI10093
27 Jun 2019 14:50:30,317 INFO : Total peptides inserted: 1
27 Jun 2019 14:50:30,317 INFO : Inserting H4(4to17)K12ac1K16ac1me0 - BI10097
27 Jun 2019 14:50:31,869 INFO : Total peptides inserted: 1
27 Jun 2019 14:50:31,869 INFO : Inserting H4(4to17)K8ac1K12ac1K16ac1me0_right peak - BI10098
27 Jun 2019 14:50:33,085 INFO : Total peptides inserted: 1
27 Jun 2019 14:50:33,086 INFO : Inserting H4(4to17)K5ac1K8ac1K12ac1me0_left peak - BI10099
27 Jun 2019 14:50:35,762 INFO : Total peptides inserted: 1
27 Jun 2019 14:50:35,762 INFO : Inserting H4(4to17)K5ac1K8ac1K16ac1me0_right peak - BI10100
27 Jun 2019 14:50:37,217 INFO : Total peptides inserted: 1
27 Jun 2019 14:50:37,218 INFO : Inserting H4(4to17)K5ac1K8ac1K12ac1K16ac1me0 - BI10101
27 Jun 2019 14:50:39,850 INFO : Total peptides inserted: 1
27 Jun 2019 14:50:39,851 INFO : Inserting H4(68-78)AltNorm - BI10108
27 Jun 2019 14:50:42,250 INFO : Total peptides inserted: 1
27 Jun 2019 14:50:42,251 INFO : Inserting H4(68-78)AltNorm - BI10108p
27 Jun 2019 14:50:43,135 INFO : Total peptides inserted: 1
27 Jun 2019 14:50:43,135 INFO : Inserting H4(20to23)K20me0 - BI10103
27 Jun 2019 14:50:44,374 INFO : Total peptides inserted: 1
27 Jun 2019 14:50:44,374 INFO : Inserting H4(20to23)K20me1 - BI10104
27 Jun 2019 14:50:45,474 INFO : Total peptides inserted: 1
27 Jun 2019 14:50:45,475 INFO : Inserting H4(20to23)K20me2 - BI10105
27 Jun 2019 14:50:46,787 INFO : Total peptides inserted: 1
27 Jun 2019 14:50:46,788 INFO : Inserting H4(20to23)K20me3 - BI10106
27 Jun 2019 14:50:47,947 INFO : Total peptides inserted: 1
27 Jun 2019 14:50:47,947 INFO : Inserting H2A(21to29)NORM - BI10109
27 Jun 2019 14:50:49,927 INFO : Total peptides inserted: 1
27 Jun 2019 14:51:03,470 INFO : Copied LINCS_GCP_Plate63_annotated_minimized.skyd to cloud storage.
27 Jun 2019 14:51:03,629 INFO : Copied Histone_2016_updated.blib to cloud storage.
27 Jun 2019 14:51:03,832 INFO : Copied Histone_2016_updated.redundant.blib to cloud storage.
27 Jun 2019 14:51:05,812 INFO : Completed import of Skyline document from LINCS_GCP_Plate63_annotated_minimized_2018-12-05_11-54-32.sky.zip
27 Jun 2019 14:51:05,905 INFO : Successfully completed task 'org.labkey.targetedms.pipeline.TargetedMSImportTask'