Skyline document import - LINCS_GCP_Plate34_annotated_minimized_2018-05-07_16-24-00.sky.zip

GCP

Job Status

Created: 2019-06-27 14:12:38
Modified: 2020-06-01 17:07:59
Email: karen@broadinstitute.org
Status: COMPLETE
Info:
Description: Skyline document import - LINCS_GCP_Plate34_annotated_minimized_2018-05-07_16-24-00.sky.zip
File Path: /data/labkey/files/LINCS/Publications/Touchstone_2/GCP/@files/LINCS_GCP_Plate34_annotated_minimized_2018-05-07_16-24-00.sky_2019-06-27_14-13-06.log
Files: LINCS_GCP_Plate34_annotated_minimized_2018-05-07_16-24-00.sky_2019-06-27_14-13-06.log

Log File


27 Jun 2019 14:38:14,876 INFO : Starting to run task 'org.labkey.targetedms.pipeline.TargetedMSImportTask' at location 'webserver-high-priority'
27 Jun 2019 14:38:18,173 INFO : Created temp file because input is from cloud: s3://s3.amazonaws.com/mc-panoramaweb/container5511/LINCS_GCP_Plate34_annotated_minimized_2018-05-07_16-24-00.sky.zip
27 Jun 2019 14:38:18,176 INFO : Starting to import Skyline document from LINCS_GCP_Plate34_annotated_minimized_2018-05-07_16-24-00.sky.zip
27 Jun 2019 14:38:18,177 INFO : Expanding Histone2013.blib
27 Jun 2019 14:38:18,180 INFO : Expanding Histone2013.redundant.blib
27 Jun 2019 14:38:18,183 INFO : Expanding LINCS_GCP_Plate34_annotated_minimized.skyd
27 Jun 2019 14:38:19,538 INFO : Expanding LINCS_GCP_Plate34_annotated_minimized.sky
27 Jun 2019 14:38:19,619 WARN : The version of this Skyline document is 4.11. This is newer than the highest supported version 4.1
27 Jun 2019 14:38:21,619 INFO : Inserting H3K4me0 - BI10003
27 Jun 2019 14:38:22,530 INFO : Total peptides inserted: 1
27 Jun 2019 14:38:22,530 INFO : Inserting H3K4me1 - BI10004
27 Jun 2019 14:38:23,579 INFO : Total peptides inserted: 1
27 Jun 2019 14:38:23,579 INFO : Inserting H3K4me2 - BI10005
27 Jun 2019 14:38:24,984 INFO : Total peptides inserted: 1
27 Jun 2019 14:38:24,984 INFO : Inserting H3K4me3 - BI10006
27 Jun 2019 14:38:26,834 INFO : Total peptides inserted: 1
27 Jun 2019 14:38:26,835 INFO : Inserting H3K4ac1 - BI10007
27 Jun 2019 14:38:27,612 INFO : Total peptides inserted: 1
27 Jun 2019 14:38:27,613 INFO : Inserting H3K9me0K14ac0 - BI10008
27 Jun 2019 14:38:28,652 INFO : Total peptides inserted: 1
27 Jun 2019 14:38:28,652 INFO : Inserting H3K9me1K14ac0 - BI10009
27 Jun 2019 14:38:29,670 INFO : Total peptides inserted: 1
27 Jun 2019 14:38:29,670 INFO : Inserting H3K9me2K14ac0 - BI10010
27 Jun 2019 14:38:30,694 INFO : Total peptides inserted: 1
27 Jun 2019 14:38:30,694 INFO : Inserting H3K9me3K14ac0 - BI10011
27 Jun 2019 14:38:31,720 INFO : Total peptides inserted: 1
27 Jun 2019 14:38:31,720 INFO : Inserting H3K9ac1K14ac0 - BI10012
27 Jun 2019 14:38:32,695 INFO : Total peptides inserted: 1
27 Jun 2019 14:38:32,696 INFO : Inserting H3K9me0K14ac1 - BI10013
27 Jun 2019 14:38:33,699 INFO : Total peptides inserted: 1
27 Jun 2019 14:38:33,700 INFO : Inserting H3K9me1K14ac1 - BI10014
27 Jun 2019 14:38:34,701 INFO : Total peptides inserted: 1
27 Jun 2019 14:38:34,701 INFO : Inserting H3K9me2K14ac1 - BI10015
27 Jun 2019 14:38:35,759 INFO : Total peptides inserted: 1
27 Jun 2019 14:38:35,760 INFO : Inserting H3K9me3K14ac1 - BI10016
27 Jun 2019 14:38:36,747 INFO : Total peptides inserted: 1
27 Jun 2019 14:38:36,748 INFO : Inserting H3K9ac1K14ac1 - BI10017
27 Jun 2019 14:38:37,726 INFO : Total peptides inserted: 1
27 Jun 2019 14:38:37,726 INFO : Inserting H3K9me0S10ph1K14ac0 - BI10018
27 Jun 2019 14:38:38,796 INFO : Total peptides inserted: 1
27 Jun 2019 14:38:38,797 INFO : Inserting H3K9me1S10ph1K14ac0 - BI10019
27 Jun 2019 14:38:39,865 INFO : Total peptides inserted: 1
27 Jun 2019 14:38:39,866 INFO : Inserting H3K9me2S10ph1K14ac0 - BI10020
27 Jun 2019 14:38:40,858 INFO : Total peptides inserted: 1
27 Jun 2019 14:38:40,859 INFO : Inserting H3K9me3S10ph1K14ac0 - BI10021
27 Jun 2019 14:38:41,787 INFO : Total peptides inserted: 1
27 Jun 2019 14:38:41,788 INFO : Inserting H3K9ac1S10ph1K14ac0 - BI10022
27 Jun 2019 14:38:43,658 INFO : Total peptides inserted: 1
27 Jun 2019 14:38:43,658 INFO : Inserting H3K9me0S10ph1K14ac1 - BI10023
27 Jun 2019 14:38:44,822 INFO : Total peptides inserted: 1
27 Jun 2019 14:38:44,822 INFO : Inserting H3K9me1S10ph1K14ac1 - BI10024
27 Jun 2019 14:38:45,945 INFO : Total peptides inserted: 1
27 Jun 2019 14:38:45,946 INFO : Inserting H3K9me2S10ph1K14ac1 - BI10025
27 Jun 2019 14:38:46,937 INFO : Total peptides inserted: 1
27 Jun 2019 14:38:46,937 INFO : Inserting H3K9me3S10ph1K14ac1 - BI10026
27 Jun 2019 14:38:47,932 INFO : Total peptides inserted: 1
27 Jun 2019 14:38:47,933 INFO : Inserting H3K9ac1S10ph1K14ac1 - BI10027
27 Jun 2019 14:38:49,204 INFO : Total peptides inserted: 1
27 Jun 2019 14:38:49,204 INFO : Inserting H3K18ac0K23ac0 - BI10028
27 Jun 2019 14:38:50,143 INFO : Total peptides inserted: 1
27 Jun 2019 14:38:50,143 INFO : Inserting H3K18ac1K23ac0 - BI10029
27 Jun 2019 14:38:51,092 INFO : Total peptides inserted: 1
27 Jun 2019 14:38:51,092 INFO : Inserting H3K18ac0K23ac1 - BI10030
27 Jun 2019 14:38:52,017 INFO : Total peptides inserted: 1
27 Jun 2019 14:38:52,018 INFO : Inserting H3K18ac1K23ac1 - BI10031
27 Jun 2019 14:38:52,861 INFO : Total peptides inserted: 1
27 Jun 2019 14:38:52,861 INFO : Inserting H3K18ub1K23ac0 - BI10032
27 Jun 2019 14:38:54,527 INFO : Total peptides inserted: 1
27 Jun 2019 14:38:54,528 INFO : Inserting H3K18ac0K23ub1 - BI10033
27 Jun 2019 14:38:55,739 INFO : Total peptides inserted: 1
27 Jun 2019 14:38:55,740 INFO : Inserting H3K27me0K36me0 - BI10034
27 Jun 2019 14:38:57,208 INFO : Total peptides inserted: 1
27 Jun 2019 14:38:57,209 INFO : Inserting H3K27me0K36me1 - BI10085
27 Jun 2019 14:38:58,578 INFO : Total peptides inserted: 1
27 Jun 2019 14:38:58,578 INFO : Inserting H3K27me0K36me2 - BI10086
27 Jun 2019 14:38:59,714 INFO : Total peptides inserted: 1
27 Jun 2019 14:38:59,714 INFO : Inserting H3K27me0K36me3 - BI10087
27 Jun 2019 14:39:00,574 INFO : Total peptides inserted: 1
27 Jun 2019 14:39:00,575 INFO : Inserting H3K27me1K36me0 - BI10035
27 Jun 2019 14:39:02,114 INFO : Total peptides inserted: 1
27 Jun 2019 14:39:02,114 INFO : Inserting H3K27me1K36me1 - BI10036
27 Jun 2019 14:39:03,138 INFO : Total peptides inserted: 1
27 Jun 2019 14:39:03,138 INFO : Inserting H3K27me1K36me2 - BI10037
27 Jun 2019 14:39:04,233 INFO : Total peptides inserted: 1
27 Jun 2019 14:39:04,234 INFO : Inserting H3K27me1K36me3 - BI10038
27 Jun 2019 14:39:05,371 INFO : Total peptides inserted: 1
27 Jun 2019 14:39:05,371 INFO : Inserting H3K27me2K36me0 - BI10039
27 Jun 2019 14:39:06,263 INFO : Total peptides inserted: 1
27 Jun 2019 14:39:06,264 INFO : Inserting H3K27me2K36me1 - BI10040
27 Jun 2019 14:39:07,306 INFO : Total peptides inserted: 1
27 Jun 2019 14:39:07,306 INFO : Inserting H3K27me2K36me2 - BI10041
27 Jun 2019 14:39:08,715 INFO : Total peptides inserted: 1
27 Jun 2019 14:39:08,716 INFO : Inserting H3K27me2K36me3 - BI10042
27 Jun 2019 14:39:09,545 INFO : Total peptides inserted: 1
27 Jun 2019 14:39:09,546 INFO : Inserting H3K27me3K36me0 - BI10043
27 Jun 2019 14:39:10,417 INFO : Total peptides inserted: 1
27 Jun 2019 14:39:10,417 INFO : Inserting H3K27me3K36me1 - BI10044
27 Jun 2019 14:39:11,591 INFO : Total peptides inserted: 1
27 Jun 2019 14:39:11,592 INFO : Inserting H3K27me3K36me2 - BI10045
27 Jun 2019 14:39:12,949 INFO : Total peptides inserted: 1
27 Jun 2019 14:39:12,950 INFO : Inserting H3K27me3K36me3 - BI10046
27 Jun 2019 14:39:14,621 INFO : Total peptides inserted: 1
27 Jun 2019 14:39:14,621 INFO : Inserting H3K27ac1K36me0 - BI10047
27 Jun 2019 14:39:15,763 INFO : Total peptides inserted: 1
27 Jun 2019 14:39:15,763 INFO : Inserting H3K27ac1K36me1 - BI10048
27 Jun 2019 14:39:16,912 INFO : Total peptides inserted: 1
27 Jun 2019 14:39:16,912 INFO : Inserting H3K27ac1K36me2 - BI10049
27 Jun 2019 14:39:17,949 INFO : Total peptides inserted: 1
27 Jun 2019 14:39:17,949 INFO : Inserting H3K27ac1K36me3 - BI10050
27 Jun 2019 14:39:19,002 INFO : Total peptides inserted: 1
27 Jun 2019 14:39:19,002 INFO : Inserting H3.3K27me0K36me0 - BI10051
27 Jun 2019 14:39:19,880 INFO : Total peptides inserted: 1
27 Jun 2019 14:39:19,880 INFO : Inserting H3NORM(41-49) - BI10052
27 Jun 2019 14:39:21,328 INFO : Total peptides inserted: 1
27 Jun 2019 14:39:21,328 INFO : Inserting H3NORM(41-49) - BI10052p
27 Jun 2019 14:39:22,332 INFO : Total peptides inserted: 1
27 Jun 2019 14:39:22,333 INFO : Inserting H3K56me0 - BI10054
27 Jun 2019 14:39:23,465 INFO : Total peptides inserted: 1
27 Jun 2019 14:39:23,465 INFO : Inserting H3K56me1 - BI10055
27 Jun 2019 14:39:24,478 INFO : Total peptides inserted: 1
27 Jun 2019 14:39:24,478 INFO : Inserting H3K56me2 - BI10056
27 Jun 2019 14:39:25,388 INFO : Total peptides inserted: 1
27 Jun 2019 14:39:25,389 INFO : Inserting H3K79me0 - BI10060
27 Jun 2019 14:39:26,659 INFO : Total peptides inserted: 1
27 Jun 2019 14:39:26,660 INFO : Inserting H3K79me1 - BI10061
27 Jun 2019 14:39:27,884 INFO : Total peptides inserted: 1
27 Jun 2019 14:39:27,885 INFO : Inserting H3K79me2 - BI10062
27 Jun 2019 14:39:28,987 INFO : Total peptides inserted: 1
27 Jun 2019 14:39:45,008 INFO : Copied LINCS_GCP_Plate34_annotated_minimized.skyd to cloud storage.
27 Jun 2019 14:39:45,226 INFO : Copied Histone2013.blib to cloud storage.
27 Jun 2019 14:39:45,417 INFO : Copied Histone2013.redundant.blib to cloud storage.
27 Jun 2019 14:39:47,108 INFO : Completed import of Skyline document from LINCS_GCP_Plate34_annotated_minimized_2018-05-07_16-24-00.sky.zip
27 Jun 2019 14:39:47,200 INFO : Successfully completed task 'org.labkey.targetedms.pipeline.TargetedMSImportTask'