Skyline document import - LINCS_GCP_Plate33_annotated_minimized_2018-05-07_15-20-54.sky.zip

GCP

Job Status

Created: 2019-06-27 14:12:37
Modified: 2020-06-01 17:07:59
Email: karen@broadinstitute.org
Status: COMPLETE
Info:
Description: Skyline document import - LINCS_GCP_Plate33_annotated_minimized_2018-05-07_15-20-54.sky.zip
File Path: /data/labkey/files/LINCS/Publications/Touchstone_2/GCP/@files/LINCS_GCP_Plate33_annotated_minimized_2018-05-07_15-20-54.sky_2019-06-27_14-13-04.log
Files: LINCS_GCP_Plate33_annotated_minimized_2018-05-07_15-20-54.sky_2019-06-27_14-13-04.log
Completed Runs: LINCS_GCP_Plate33_annotated_minimized_2018-05-07_15-20-54.sky.zip

Log File


27 Jun 2019 14:36:33,693 INFO : Starting to run task 'org.labkey.targetedms.pipeline.TargetedMSImportTask' at location 'webserver-high-priority'
27 Jun 2019 14:36:40,591 INFO : Created temp file because input is from cloud: s3://s3.amazonaws.com/mc-panoramaweb/container5511/LINCS_GCP_Plate33_annotated_minimized_2018-05-07_15-20-54.sky.zip
27 Jun 2019 14:36:40,594 INFO : Starting to import Skyline document from LINCS_GCP_Plate33_annotated_minimized_2018-05-07_15-20-54.sky.zip
27 Jun 2019 14:36:40,595 INFO : Expanding Histone2013.blib
27 Jun 2019 14:36:40,599 INFO : Expanding Histone2013.redundant.blib
27 Jun 2019 14:36:40,602 INFO : Expanding LINCS_GCP_Plate33_annotated_minimized.skyd
27 Jun 2019 14:36:42,660 INFO : Expanding LINCS_GCP_Plate33_annotated_minimized.sky
27 Jun 2019 14:36:42,739 WARN : The version of this Skyline document is 4.11. This is newer than the highest supported version 4.1
27 Jun 2019 14:36:44,781 INFO : Inserting H3K4me0 - BI10003
27 Jun 2019 14:36:46,240 INFO : Total peptides inserted: 1
27 Jun 2019 14:36:46,241 INFO : Inserting H3K4me1 - BI10004
27 Jun 2019 14:36:47,197 INFO : Total peptides inserted: 1
27 Jun 2019 14:36:47,198 INFO : Inserting H3K4me2 - BI10005
27 Jun 2019 14:36:49,549 INFO : Total peptides inserted: 1
27 Jun 2019 14:36:49,549 INFO : Inserting H3K4me3 - BI10006
27 Jun 2019 14:36:51,654 INFO : Total peptides inserted: 1
27 Jun 2019 14:36:51,654 INFO : Inserting H3K4ac1 - BI10007
27 Jun 2019 14:36:52,514 INFO : Total peptides inserted: 1
27 Jun 2019 14:36:52,514 INFO : Inserting H3K9me0K14ac0 - BI10008
27 Jun 2019 14:36:53,708 INFO : Total peptides inserted: 1
27 Jun 2019 14:36:53,709 INFO : Inserting H3K9me1K14ac0 - BI10009
27 Jun 2019 14:36:54,930 INFO : Total peptides inserted: 1
27 Jun 2019 14:36:54,931 INFO : Inserting H3K9me2K14ac0 - BI10010
27 Jun 2019 14:36:56,137 INFO : Total peptides inserted: 1
27 Jun 2019 14:36:56,138 INFO : Inserting H3K9me3K14ac0 - BI10011
27 Jun 2019 14:36:57,255 INFO : Total peptides inserted: 1
27 Jun 2019 14:36:57,256 INFO : Inserting H3K9ac1K14ac0 - BI10012
27 Jun 2019 14:36:58,402 INFO : Total peptides inserted: 1
27 Jun 2019 14:36:58,402 INFO : Inserting H3K9me0K14ac1 - BI10013
27 Jun 2019 14:36:59,564 INFO : Total peptides inserted: 1
27 Jun 2019 14:36:59,564 INFO : Inserting H3K9me1K14ac1 - BI10014
27 Jun 2019 14:37:00,686 INFO : Total peptides inserted: 1
27 Jun 2019 14:37:00,687 INFO : Inserting H3K9me2K14ac1 - BI10015
27 Jun 2019 14:37:01,870 INFO : Total peptides inserted: 1
27 Jun 2019 14:37:01,870 INFO : Inserting H3K9me3K14ac1 - BI10016
27 Jun 2019 14:37:03,027 INFO : Total peptides inserted: 1
27 Jun 2019 14:37:03,028 INFO : Inserting H3K9ac1K14ac1 - BI10017
27 Jun 2019 14:37:04,173 INFO : Total peptides inserted: 1
27 Jun 2019 14:37:04,174 INFO : Inserting H3K9me0S10ph1K14ac0 - BI10018
27 Jun 2019 14:37:05,352 INFO : Total peptides inserted: 1
27 Jun 2019 14:37:05,353 INFO : Inserting H3K9me1S10ph1K14ac0 - BI10019
27 Jun 2019 14:37:06,331 INFO : Total peptides inserted: 1
27 Jun 2019 14:37:06,332 INFO : Inserting H3K9me2S10ph1K14ac0 - BI10020
27 Jun 2019 14:37:07,534 INFO : Total peptides inserted: 1
27 Jun 2019 14:37:07,535 INFO : Inserting H3K9me3S10ph1K14ac0 - BI10021
27 Jun 2019 14:37:08,581 INFO : Total peptides inserted: 1
27 Jun 2019 14:37:08,581 INFO : Inserting H3K9ac1S10ph1K14ac0 - BI10022
27 Jun 2019 14:37:10,049 INFO : Total peptides inserted: 1
27 Jun 2019 14:37:10,049 INFO : Inserting H3K9me0S10ph1K14ac1 - BI10023
27 Jun 2019 14:37:11,217 INFO : Total peptides inserted: 1
27 Jun 2019 14:37:11,218 INFO : Inserting H3K9me1S10ph1K14ac1 - BI10024
27 Jun 2019 14:37:12,471 INFO : Total peptides inserted: 1
27 Jun 2019 14:37:12,472 INFO : Inserting H3K9me2S10ph1K14ac1 - BI10025
27 Jun 2019 14:37:13,564 INFO : Total peptides inserted: 1
27 Jun 2019 14:37:13,565 INFO : Inserting H3K9me3S10ph1K14ac1 - BI10026
27 Jun 2019 14:37:14,756 INFO : Total peptides inserted: 1
27 Jun 2019 14:37:14,756 INFO : Inserting H3K9ac1S10ph1K14ac1 - BI10027
27 Jun 2019 14:37:16,096 INFO : Total peptides inserted: 1
27 Jun 2019 14:37:16,096 INFO : Inserting H3K18ac0K23ac0 - BI10028
27 Jun 2019 14:37:17,144 INFO : Total peptides inserted: 1
27 Jun 2019 14:37:17,144 INFO : Inserting H3K18ac1K23ac0 - BI10029
27 Jun 2019 14:37:18,202 INFO : Total peptides inserted: 1
27 Jun 2019 14:37:18,203 INFO : Inserting H3K18ac0K23ac1 - BI10030
27 Jun 2019 14:37:19,325 INFO : Total peptides inserted: 1
27 Jun 2019 14:37:19,325 INFO : Inserting H3K18ac1K23ac1 - BI10031
27 Jun 2019 14:37:20,390 INFO : Total peptides inserted: 1
27 Jun 2019 14:37:20,390 INFO : Inserting H3K18ub1K23ac0 - BI10032
27 Jun 2019 14:37:21,749 INFO : Total peptides inserted: 1
27 Jun 2019 14:37:21,749 INFO : Inserting H3K18ac0K23ub1 - BI10033
27 Jun 2019 14:37:23,309 INFO : Total peptides inserted: 1
27 Jun 2019 14:37:23,310 INFO : Inserting H3K27me0K36me0 - BI10034
27 Jun 2019 14:37:25,105 INFO : Total peptides inserted: 1
27 Jun 2019 14:37:25,105 INFO : Inserting H3K27me0K36me1 - BI10085
27 Jun 2019 14:37:26,594 INFO : Total peptides inserted: 1
27 Jun 2019 14:37:26,594 INFO : Inserting H3K27me0K36me2 - BI10086
27 Jun 2019 14:37:27,649 INFO : Total peptides inserted: 1
27 Jun 2019 14:37:27,649 INFO : Inserting H3K27me0K36me3 - BI10087
27 Jun 2019 14:37:28,972 INFO : Total peptides inserted: 1
27 Jun 2019 14:37:28,973 INFO : Inserting H3K27me1K36me0 - BI10035
27 Jun 2019 14:37:30,781 INFO : Total peptides inserted: 1
27 Jun 2019 14:37:30,782 INFO : Inserting H3K27me1K36me1 - BI10036
27 Jun 2019 14:37:32,053 INFO : Total peptides inserted: 1
27 Jun 2019 14:37:32,053 INFO : Inserting H3K27me1K36me2 - BI10037
27 Jun 2019 14:37:33,236 INFO : Total peptides inserted: 1
27 Jun 2019 14:37:33,237 INFO : Inserting H3K27me1K36me3 - BI10038
27 Jun 2019 14:37:34,428 INFO : Total peptides inserted: 1
27 Jun 2019 14:37:34,428 INFO : Inserting H3K27me2K36me0 - BI10039
27 Jun 2019 14:37:35,498 INFO : Total peptides inserted: 1
27 Jun 2019 14:37:35,499 INFO : Inserting H3K27me2K36me1 - BI10040
27 Jun 2019 14:37:36,870 INFO : Total peptides inserted: 1
27 Jun 2019 14:37:36,871 INFO : Inserting H3K27me2K36me2 - BI10041
27 Jun 2019 14:37:38,571 INFO : Total peptides inserted: 1
27 Jun 2019 14:37:38,571 INFO : Inserting H3K27me2K36me3 - BI10042
27 Jun 2019 14:37:39,567 INFO : Total peptides inserted: 1
27 Jun 2019 14:37:39,567 INFO : Inserting H3K27me3K36me0 - BI10043
27 Jun 2019 14:37:40,687 INFO : Total peptides inserted: 1
27 Jun 2019 14:37:40,688 INFO : Inserting H3K27me3K36me1 - BI10044
27 Jun 2019 14:37:42,095 INFO : Total peptides inserted: 1
27 Jun 2019 14:37:42,095 INFO : Inserting H3K27me3K36me2 - BI10045
27 Jun 2019 14:37:43,442 INFO : Total peptides inserted: 1
27 Jun 2019 14:37:43,443 INFO : Inserting H3K27me3K36me3 - BI10046
27 Jun 2019 14:37:45,095 INFO : Total peptides inserted: 1
27 Jun 2019 14:37:45,095 INFO : Inserting H3K27ac1K36me0 - BI10047
27 Jun 2019 14:37:46,419 INFO : Total peptides inserted: 1
27 Jun 2019 14:37:46,419 INFO : Inserting H3K27ac1K36me1 - BI10048
27 Jun 2019 14:37:47,562 INFO : Total peptides inserted: 1
27 Jun 2019 14:37:47,563 INFO : Inserting H3K27ac1K36me2 - BI10049
27 Jun 2019 14:37:48,718 INFO : Total peptides inserted: 1
27 Jun 2019 14:37:48,718 INFO : Inserting H3K27ac1K36me3 - BI10050
27 Jun 2019 14:37:49,925 INFO : Total peptides inserted: 1
27 Jun 2019 14:37:49,925 INFO : Inserting H3.3K27me0K36me0 - BI10051
27 Jun 2019 14:37:50,918 INFO : Total peptides inserted: 1
27 Jun 2019 14:37:50,919 INFO : Inserting H3NORM(41-49) - BI10052
27 Jun 2019 14:37:52,708 INFO : Total peptides inserted: 1
27 Jun 2019 14:37:52,709 INFO : Inserting H3NORM(41-49) - BI10052p
27 Jun 2019 14:37:53,993 INFO : Total peptides inserted: 1
27 Jun 2019 14:37:53,993 INFO : Inserting H3K56me0 - BI10054
27 Jun 2019 14:37:55,252 INFO : Total peptides inserted: 1
27 Jun 2019 14:37:55,252 INFO : Inserting H3K56me1 - BI10055
27 Jun 2019 14:37:56,469 INFO : Total peptides inserted: 1
27 Jun 2019 14:37:56,470 INFO : Inserting H3K56me2 - BI10056
27 Jun 2019 14:37:57,593 INFO : Total peptides inserted: 1
27 Jun 2019 14:37:57,594 INFO : Inserting H3K79me0 - BI10060
27 Jun 2019 14:37:59,079 INFO : Total peptides inserted: 1
27 Jun 2019 14:37:59,080 INFO : Inserting H3K79me1 - BI10061
27 Jun 2019 14:38:00,572 INFO : Total peptides inserted: 1
27 Jun 2019 14:38:00,572 INFO : Inserting H3K79me2 - BI10062
27 Jun 2019 14:38:01,767 INFO : Total peptides inserted: 1
27 Jun 2019 14:38:12,235 INFO : Copied LINCS_GCP_Plate33_annotated_minimized.skyd to cloud storage.
27 Jun 2019 14:38:12,409 INFO : Copied Histone2013.blib to cloud storage.
27 Jun 2019 14:38:12,603 INFO : Copied Histone2013.redundant.blib to cloud storage.
27 Jun 2019 14:38:14,551 INFO : Completed import of Skyline document from LINCS_GCP_Plate33_annotated_minimized_2018-05-07_15-20-54.sky.zip
27 Jun 2019 14:38:14,634 INFO : Successfully completed task 'org.labkey.targetedms.pipeline.TargetedMSImportTask'